RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 TVP23CQ96ET8 276 aa12.5□□□□□ -0.41
CLN6-220ENST00000637450 TXNDC17Q9BRA2 123 aa12.5□□□□□ -0.41
CLN6-220ENST00000637450 RPH3ALQ9UNE2 315 aa12.5□□□□□ -0.41
CLN6-220ENST00000637450 VPS13BQ7Z7G8 4022 aa12.5□□□□□ -0.41
CLN6-220ENST00000637450 TRAV21A0A0B4J279 112 aa12.49□□□□□ -0.41
CLN6-220ENST00000637450 C9JCJ5 164 aa12.49□□□□□ -0.41
CLN6-220ENST00000637450 XGP55808 180 aa12.49□□□□□ -0.41
CLN6-220ENST00000637450 ACOT6Q3I5F7 207 aaPredicted RBP12.49□□□□□ -0.41
CLN6-220ENST00000637450 A0A1W2PPV4 95 aa12.48□□□□□ -0.41
CLN6-220ENST00000637450 EPM2AB3EWF7 344 aa12.48□□□□□ -0.41
CLN6-220ENST00000637450 TREM1Q9NP99 234 aa12.48□□□□□ -0.41
CLN6-220ENST00000637450 TRAV8-1A0A0A6YYK1 113 aa12.47□□□□□ -0.41
CLN6-220ENST00000637450 LOC100131303A0A0U1RQF7 123 aa12.47□□□□□ -0.41
CLN6-220ENST00000637450 TYMSP04818 313 aa12.47□□□□□ -0.41
CLN6-220ENST00000637450 RAB2AP61019 212 aa12.47□□□□□ -0.41
CLN6-220ENST00000637450 SH2D6Q7Z4S9 175 aa12.47□□□□□ -0.41
CLN6-220ENST00000637450 A6NHS1 94 aa12.46□□□□□ -0.41
CLN6-220ENST00000637450 F6UZH7 168 aa12.46□□□□□ -0.41
CLN6-220ENST00000637450 CRYGDP07320 174 aa12.46□□□□□ -0.41
CLN6-220ENST00000637450 GATA1P15976 413 aaPredicted RBP12.46□□□□□ -0.41
CLN6-220ENST00000637450 TIRAPP58753 221 aa12.46□□□□□ -0.41
CLN6-220ENST00000637450 KRTAP10-1P60331 282 aa12.46□□□□□ -0.41
CLN6-220ENST00000637450 C10orf126Q8N4M7 172 aa12.46□□□□□ -0.41
CLN6-220ENST00000637450 KCNS1Q96KK3 526 aa12.46□□□□□ -0.41
CLN6-220ENST00000637450 SDF2L1Q9HCN8 221 aa12.46□□□□□ -0.41
CLN6-220ENST00000637450 DEFA1P59665 94 aa12.45□□□□□ -0.42
CLN6-220ENST00000637450 DEFA3P59666 94 aa12.45□□□□□ -0.42
CLN6-220ENST00000637450 GNG5P63218 68 aa12.45□□□□□ -0.42
CLN6-220ENST00000637450 OR10G9Q8NGN4 311 aa12.45□□□□□ -0.42
CLN6-220ENST00000637450 OR10G7Q8NGN6 311 aa12.45□□□□□ -0.42
CLN6-220ENST00000637450 HMGB3O15347 200 aaKnown RBP12.44□□□□□ -0.42
CLN6-220ENST00000637450 ASB13Q8WXK3 278 aa12.44□□□□□ -0.42
CLN6-220ENST00000637450 NHLRC2Q8NBF2 726 aa12.43□□□□□ -0.42
CLN6-220ENST00000637450 SGK494Q96LW2 274 aa12.43□□□□□ -0.42
CLN6-220ENST00000637450 IGHV3-38A0A0C4DH36 116 aa12.42□□□□□ -0.42
CLN6-220ENST00000637450 SERTM2A0A1B0GWG4 89 aa12.42□□□□□ -0.42
CLN6-220ENST00000637450 FBLL1A6NHQ2 334 aaKnown RBP12.42□□□□□ -0.42
CLN6-220ENST00000637450 STAG3L2P0CL84 134 aa12.42□□□□□ -0.42
CLN6-220ENST00000637450 STAG3L3P0CL85 134 aa12.42□□□□□ -0.42
CLN6-220ENST00000637450 ARL14EPLP0DKL9 152 aa12.42□□□□□ -0.42
CLN6-220ENST00000637450 SUN5Q8TC36 379 aa12.42□□□□□ -0.42
CLN6-220ENST00000637450 RS1O15537 224 aa12.41□□□□□ -0.42
CLN6-220ENST00000637450 CIDEAO60543 219 aa12.41□□□□□ -0.42
CLN6-220ENST00000637450 TCRAP04437 139 aa12.41□□□□□ -0.42
CLN6-220ENST00000637450 PFN1P07737 140 aaKnown RBP12.41□□□□□ -0.42
CLN6-220ENST00000637450 GCSHP23434 173 aa12.41□□□□□ -0.42
CLN6-220ENST00000637450 CDC34P49427 236 aaPredicted RBP12.41□□□□□ -0.42
CLN6-220ENST00000637450 ZNF80P51504 273 aaPredicted RBP12.41□□□□□ -0.42
CLN6-220ENST00000637450 ZNF876PQ49A33 203 aa12.41□□□□□ -0.42
CLN6-220ENST00000637450 LINC01556Q5JQF7 62 aa12.41□□□□□ -0.42
CLN6-220ENST00000637450 CFAP126Q5VTH2 177 aa12.41□□□□□ -0.42
CLN6-220ENST00000637450 DPPA3Q6W0C5 159 aa12.41□□□□□ -0.42
CLN6-220ENST00000637450 SLC25A29Q8N8R3 303 aa12.41□□□□□ -0.42
CLN6-220ENST00000637450 OR2G3Q8NGZ4 309 aa12.41□□□□□ -0.42
CLN6-220ENST00000637450 NDFIP1Q9BT67 221 aa12.41□□□□□ -0.42
CLN6-220ENST00000637450 C11orf21Q9P2W6 132 aa12.41□□□□□ -0.42
CLN6-220ENST00000637450 DNAH8Q96JB1 4490 aa12.41□□□□□ -0.42
CLN6-220ENST00000637450 TAAR5O14804 337 aa12.4□□□□□ -0.42
CLN6-220ENST00000637450 INAFM2P0DMQ5 153 aa12.4□□□□□ -0.42
CLN6-220ENST00000637450 PPT1P50897 306 aa12.4□□□□□ -0.42
CLN6-220ENST00000637450 C5orf17Q8NAS9 161 aa12.4□□□□□ -0.42
CLN6-220ENST00000637450 RAB24Q969Q5 203 aa12.4□□□□□ -0.42
CLN6-220ENST00000637450 TRBV6-4A0A1B0GX49 114 aa12.39□□□□□ -0.43
CLN6-220ENST00000637450 LRCOL1A6NCL2 159 aa12.39□□□□□ -0.43
CLN6-220ENST00000637450 IBA57-AS1B1ANH7 110 aa12.39□□□□□ -0.43
CLN6-220ENST00000637450 GCHFRP30047 84 aa12.39□□□□□ -0.43
CLN6-220ENST00000637450 HSD17B11Q8NBQ5 300 aa12.39□□□□□ -0.43
CLN6-220ENST00000637450 PRADC1Q9BSG0 188 aa12.39□□□□□ -0.43
CLN6-220ENST00000637450 PSG8Q9UQ74 426 aa12.39□□□□□ -0.43
CLN6-220ENST00000637450 MYCBP2O75592 4640 aa12.38□□□□□ -0.43
CLN6-220ENST00000637450 TRAV8-6A0A0B4J262 113 aa12.38□□□□□ -0.43
CLN6-220ENST00000637450 K7EQM0 130 aa12.38□□□□□ -0.43
CLN6-220ENST00000637450 GCGP01275 180 aa12.38□□□□□ -0.43
CLN6-220ENST00000637450 IGLV2-11P01706 119 aa12.38□□□□□ -0.43
CLN6-220ENST00000637450 RHOHQ15669 191 aa12.38□□□□□ -0.43
CLN6-220ENST00000637450 Q5VSD8 79 aa12.38□□□□□ -0.43
CLN6-220ENST00000637450 PTH2Q96A98 100 aa12.38□□□□□ -0.43
CLN6-220ENST00000637450 C9orf85Q96MD7 179 aa12.38□□□□□ -0.43
CLN6-220ENST00000637450 PSMG3Q9BT73 122 aaPredicted RBP12.38□□□□□ -0.43
CLN6-220ENST00000637450 BOLA1Q9Y3E2 137 aa12.38□□□□□ -0.43
CLN6-220ENST00000637450 PSCAO43653 123 aa12.37□□□□□ -0.43
CLN6-220ENST00000637450 SUMO1P63165 101 aaKnown RBP12.37□□□□□ -0.43
CLN6-220ENST00000637450 OR10J3Q5JRS4 329 aa12.37□□□□□ -0.43
CLN6-220ENST00000637450 FRZBQ92765 325 aa12.37□□□□□ -0.43
CLN6-220ENST00000637450 EPDR1Q9UM22 224 aa12.37□□□□□ -0.43
CLN6-220ENST00000637450 ALG5Q9Y673 324 aa12.37□□□□□ -0.43
CLN6-220ENST00000637450 IGHV3-73A0A0B4J1V6 119 aa12.36□□□□□ -0.43
CLN6-220ENST00000637450 PGPEP1LA6NFU8 196 aa12.36□□□□□ -0.43
CLN6-220ENST00000637450 MBP02144 154 aa12.36□□□□□ -0.43
CLN6-220ENST00000637450 ATP6V0CP27449 155 aa12.36□□□□□ -0.43
CLN6-220ENST00000637450 SERF2P84101 59 aa12.36□□□□□ -0.43
CLN6-220ENST00000637450 FLI1Q01543 452 aaPredicted RBP12.36□□□□□ -0.43
CLN6-220ENST00000637450 SMUG1Q53HV7 270 aa12.36□□□□□ -0.43
CLN6-220ENST00000637450 LELP1Q5T871 98 aa12.36□□□□□ -0.43
CLN6-220ENST00000637450 TMEM75Q8N9X5 138 aa12.36□□□□□ -0.43
CLN6-220ENST00000637450 IGLV5-52A0A0A0MRZ9 124 aa12.35□□□□□ -0.43
CLN6-220ENST00000637450 GGTLC3B5MD39 225 aa12.35□□□□□ -0.43
CLN6-220ENST00000637450 RNASE3P12724 160 aaKnown RBP12.35□□□□□ -0.43
CLN6-220ENST00000637450 ZNF506Q5JVG8 444 aa12.35□□□□□ -0.43
CLN6-220ENST00000637450 PRNTQ86SH4 94 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms