RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 HIST1H2BJP06899 126 aa12.66□□□□□ -0.38
CLN5-208ENST00000636183 HIST1H2BOP23527 126 aa12.66□□□□□ -0.38
CLN5-208ENST00000636183 HIST1H2BBP33778 126 aa12.66□□□□□ -0.38
CLN5-208ENST00000636183 HIST1H2BDP58876 126 aa12.66□□□□□ -0.38
CLN5-208ENST00000636183 HIST1H2BCP62807 126 aa12.66□□□□□ -0.38
CLN5-208ENST00000636183 HIST2H2BEQ16778 126 aa12.66□□□□□ -0.38
CLN5-208ENST00000636183 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.66□□□□□ -0.38
CLN5-208ENST00000636183 HIST1H2BHQ93079 126 aa12.66□□□□□ -0.38
CLN5-208ENST00000636183 HIST1H2BNQ99877 126 aa12.66□□□□□ -0.38
CLN5-208ENST00000636183 HIST1H2BMQ99879 126 aa12.66□□□□□ -0.38
CLN5-208ENST00000636183 PCNX1Q96RV3 2341 aa12.66□□□□□ -0.38
CLN5-208ENST00000636183 IGLV2-18A0A075B6J9 118 aa12.66□□□□□ -0.38
CLN5-208ENST00000636183 PCP4P48539 62 aa12.66□□□□□ -0.38
CLN5-208ENST00000636183 ZC2HC1AQ96GY0 325 aa12.66□□□□□ -0.38
CLN5-208ENST00000636183 HHLA3Q9XRX5 114 aa12.66□□□□□ -0.38
CLN5-208ENST00000636183 KLK12Q9UKR0 248 aa12.66□□□□□ -0.38
CLN5-208ENST00000636183 KIAA1671Q9BY89 1806 aa12.66□□□□□ -0.38
CLN5-208ENST00000636183 TRAV13-2A0A0B4J235 113 aa12.65□□□□□ -0.38
CLN5-208ENST00000636183 MRPL51Q4U2R6 128 aaKnown RBP12.65□□□□□ -0.38
CLN5-208ENST00000636183 AJUBAQ96IF1 538 aa12.65□□□□□ -0.38
CLN5-208ENST00000636183 FNDC10F2Z333 226 aa12.65□□□□□ -0.38
CLN5-208ENST00000636183 K7EQD1 137 aa12.65□□□□□ -0.38
CLN5-208ENST00000636183 NCR3O14931 201 aa12.65□□□□□ -0.38
CLN5-208ENST00000636183 PRSS57Q6UWY2 283 aa12.65□□□□□ -0.38
CLN5-208ENST00000636183 IGLV1-44P01699 117 aa12.65□□□□□ -0.38
CLN5-208ENST00000636183 VOPP1Q96AW1 172 aa12.65□□□□□ -0.38
CLN5-208ENST00000636183 SPTAN1Q13813 2472 aaKnown RBP12.65□□□□□ -0.39
CLN5-208ENST00000636183 A0A096LNI7 61 aa12.64□□□□□ -0.39
CLN5-208ENST00000636183 KIR3DS1Q14943 382 aa12.64□□□□□ -0.39
CLN5-208ENST00000636183 GFRA4Q9GZZ7 299 aa12.64□□□□□ -0.39
CLN5-208ENST00000636183 DEFB125Q8N687 156 aa12.64□□□□□ -0.39
CLN5-208ENST00000636183 ZGRF1Q86YA3 2104 aa12.64□□□□□ -0.39
CLN5-208ENST00000636183 MYCNOSP40205 109 aa12.64□□□□□ -0.39
CLN5-208ENST00000636183 NACAE9PAV3 2078 aa12.64□□□□□ -0.39
CLN5-208ENST00000636183 WT1-ASQ06250 92 aa12.64□□□□□ -0.39
CLN5-208ENST00000636183 C8orf31Q8N9H6 132 aa12.64□□□□□ -0.39
CLN5-208ENST00000636183 DNAJC9-AS1A6NH13 148 aa12.64□□□□□ -0.39
CLN5-208ENST00000636183 C14orf132Q9NPU4 83 aa12.64□□□□□ -0.39
CLN5-208ENST00000636183 CTSZQ9UBR2 303 aa12.64□□□□□ -0.39
CLN5-208ENST00000636183 FOXL2NBQ6ZUU3 175 aa12.64□□□□□ -0.39
CLN5-208ENST00000636183 SH2D6Q7Z4S9 175 aa12.63□□□□□ -0.39
CLN5-208ENST00000636183 FAM104BQ5XKR9 115 aa12.63□□□□□ -0.39
CLN5-208ENST00000636183 LINC00311Q8N616 119 aa12.63□□□□□ -0.39
CLN5-208ENST00000636183 LYPD6BQ8NI32 183 aa12.63□□□□□ -0.39
CLN5-208ENST00000636183 C17orf77Q96MU5 243 aa12.63□□□□□ -0.39
CLN5-208ENST00000636183 IGKV1-6A0A0C4DH72 117 aa12.63□□□□□ -0.39
CLN5-208ENST00000636183 H0Y9J4 135 aa12.62□□□□□ -0.39
CLN5-208ENST00000636183 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.62□□□□□ -0.39
CLN5-208ENST00000636183 FUSP35637 526 aaKnown RBP eCLIP12.62□□□□□ -0.39
CLN5-208ENST00000636183 UBE2D1P51668 147 aa12.62□□□□□ -0.39
CLN5-208ENST00000636183 C3orf79P0CE67 100 aa12.62□□□□□ -0.39
CLN5-208ENST00000636183 HILS1P60008 231 aa12.61□□□□□ -0.39
CLN5-208ENST00000636183 B9D2Q9BPU9 175 aa12.61□□□□□ -0.39
CLN5-208ENST00000636183 SPRNQ5BIV9 151 aa12.6□□□□□ -0.39
CLN5-208ENST00000636183 DYNAPQ8N1N2 210 aa12.6□□□□□ -0.39
CLN5-208ENST00000636183 ANK1P16157 1881 aa12.6□□□□□ -0.39
CLN5-208ENST00000636183 FGF6P10767 208 aa12.6□□□□□ -0.39
CLN5-208ENST00000636183 IGLL1P15814 213 aa12.6□□□□□ -0.39
CLN5-208ENST00000636183 SLC25A29Q8N8R3 303 aa12.6□□□□□ -0.39
CLN5-208ENST00000636183 Q9H8V8 135 aa12.6□□□□□ -0.39
CLN5-208ENST00000636183 LY96Q9Y6Y9 160 aa12.59□□□□□ -0.39
CLN5-208ENST00000636183 WDR81Q562E7 1941 aa12.59□□□□□ -0.39
CLN5-208ENST00000636183 ZNF124Q15973 351 aa12.59□□□□□ -0.39
CLN5-208ENST00000636183 HIST1H2BLQ99880 126 aa12.59□□□□□ -0.39
CLN5-208ENST00000636183 A0A087WZ39 114 aa12.59□□□□□ -0.39
CLN5-208ENST00000636183 FNDC1Q4ZHG4 1894 aaPredicted RBP12.59□□□□□ -0.39
CLN5-208ENST00000636183 UBE2D4Q9Y2X8 147 aa12.58□□□□□ -0.39
CLN5-208ENST00000636183 NDUFA1O15239 70 aa12.58□□□□□ -0.4
CLN5-208ENST00000636183 ZNF492Q9P255 531 aa12.58□□□□□ -0.4
CLN5-208ENST00000636183 CTSGP08311 255 aa12.58□□□□□ -0.4
CLN5-208ENST00000636183 QRFPP83859 136 aa12.58□□□□□ -0.4
CLN5-208ENST00000636183 HIGD2BQ4VC39 106 aa12.58□□□□□ -0.4
CLN5-208ENST00000636183 C4orf3Q8WVX3 66 aa12.58□□□□□ -0.4
CLN5-208ENST00000636183 CYYR1Q96J86 154 aa12.58□□□□□ -0.4
CLN5-208ENST00000636183 GBF1Q92538 1859 aa12.58□□□□□ -0.4
CLN5-208ENST00000636183 THSD7BQ9C0I4 1608 aa12.58□□□□□ -0.4
CLN5-208ENST00000636183 SEC61GP60059 68 aa12.58□□□□□ -0.4
CLN5-208ENST00000636183 COX7B2Q8TF08 81 aa12.58□□□□□ -0.4
CLN5-208ENST00000636183 PLXND1Q9Y4D7 1925 aa12.58□□□□□ -0.4
CLN5-208ENST00000636183 IGLC1P0CG04 106 aa12.57□□□□□ -0.4
CLN5-208ENST00000636183 KAAG1Q9UBP8 84 aa12.57□□□□□ -0.4
CLN5-208ENST00000636183 TRAV1-1A0A0B4J248 108 aa12.57□□□□□ -0.4
CLN5-208ENST00000636183 C15orf65H3BRN8 121 aa12.57□□□□□ -0.4
CLN5-208ENST00000636183 C2orf70A6NJV1 201 aa12.56□□□□□ -0.4
CLN5-208ENST00000636183 CYTL1Q9NRR1 136 aa12.56□□□□□ -0.4
CLN5-208ENST00000636183 Q6ZS49 121 aa12.56□□□□□ -0.4
CLN5-208ENST00000636183 SIPA1L1O43166 1804 aa12.56□□□□□ -0.4
CLN5-208ENST00000636183 VSIG2Q96IQ7 327 aa12.56□□□□□ -0.4
CLN5-208ENST00000636183 ZNF491Q8N8L2 437 aa12.55□□□□□ -0.4
CLN5-208ENST00000636183 HIGD2AQ9BW72 106 aa12.55□□□□□ -0.4
CLN5-208ENST00000636183 TMEM14CQ9P0S9 112 aa12.55□□□□□ -0.4
CLN5-208ENST00000636183 SHISA2Q6UWI4 295 aa12.54□□□□□ -0.4
CLN5-208ENST00000636183 WFDC9Q8NEX5 89 aa12.54□□□□□ -0.4
CLN5-208ENST00000636183 ZSWIM8A7E2V4 1837 aa12.54□□□□□ -0.4
CLN5-208ENST00000636183 UBE2CO00762 179 aa12.54□□□□□ -0.4
CLN5-208ENST00000636183 C14orf177Q52M58 125 aa12.54□□□□□ -0.4
CLN5-208ENST00000636183 ZNF493Q6ZR52 646 aa12.54□□□□□ -0.4
CLN5-208ENST00000636183 OR11H6Q8NGC7 330 aa12.54□□□□□ -0.4
CLN5-208ENST00000636183 IGHV7-81A0A0B4J1V7 117 aa12.54□□□□□ -0.4
CLN5-208ENST00000636183 HIST2H2BDQ6DRA6 164 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms