RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 SRIP30626 198 aa5.47□□□□□ -1.53
BRCA1-230ENST00000634433 MAPK1IP1LQ8NDC0 245 aa5.47□□□□□ -1.53
BRCA1-230ENST00000634433 GTSF1Q8WW33 167 aa5.47□□□□□ -1.53
BRCA1-230ENST00000634433 KLK15Q9H2R5 256 aa5.47□□□□□ -1.53
BRCA1-230ENST00000634433 Q9H8V8 135 aa5.47□□□□□ -1.53
BRCA1-230ENST00000634433 APCP25054 2843 aa5.46□□□□□ -1.53
BRCA1-230ENST00000634433 IGHV3-66A0A0C4DH42 116 aa5.46□□□□□ -1.53
BRCA1-230ENST00000634433 FABP5P3A8MUU1 101 aa5.46□□□□□ -1.53
BRCA1-230ENST00000634433 K7EMT4 169 aa5.46□□□□□ -1.53
BRCA1-230ENST00000634433 SERF1AO75920 110 aa5.46□□□□□ -1.53
BRCA1-230ENST00000634433 KLF5Q13887 457 aaPredicted RBP5.46□□□□□ -1.53
BRCA1-230ENST00000634433 C4orf26Q17RF5 130 aa5.46□□□□□ -1.53
BRCA1-230ENST00000634433 KIAA1644Q3SXP7 199 aa5.46□□□□□ -1.53
BRCA1-230ENST00000634433 TMEM78Q5T7P6 136 aa5.46□□□□□ -1.53
BRCA1-230ENST00000634433 SAMD13Q5VXD3 122 aa5.46□□□□□ -1.53
BRCA1-230ENST00000634433 SIGLECL1Q8N7X8 197 aa5.46□□□□□ -1.53
BRCA1-230ENST00000634433 C8orf49Q96NF6 230 aa5.46□□□□□ -1.53
BRCA1-230ENST00000634433 SAMD10Q9BYL1 202 aa5.46□□□□□ -1.53
BRCA1-230ENST00000634433 OTOGQ6ZRI0 2925 aa5.46□□□□□ -1.54
BRCA1-230ENST00000634433 UTP20O75691 2785 aaKnown RBP5.46□□□□□ -1.54
BRCA1-230ENST00000634433 ZNF705FA8MVS1 300 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-230ENST00000634433 SH2D1AO60880 128 aa5.46□□□□□ -1.54
BRCA1-230ENST00000634433 IGHV3-11P01762 117 aa5.46□□□□□ -1.54
BRCA1-230ENST00000634433 APOHP02749 345 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-230ENST00000634433 ELANEP08246 267 aa5.46□□□□□ -1.54
BRCA1-230ENST00000634433 PSMB8P28062 276 aa5.46□□□□□ -1.54
BRCA1-230ENST00000634433 CRIP1P50238 77 aa5.46□□□□□ -1.54
BRCA1-230ENST00000634433 IQCJQ1A5X6 159 aa5.46□□□□□ -1.54
BRCA1-230ENST00000634433 Q6ZS46 218 aa5.46□□□□□ -1.54
BRCA1-230ENST00000634433 VGLL1Q99990 258 aa5.46□□□□□ -1.54
BRCA1-230ENST00000634433 VPS13CQ709C8 3753 aa5.46□□□□□ -1.54
BRCA1-230ENST00000634433 HIVEP1P15822 2718 aa5.46□□□□□ -1.54
BRCA1-230ENST00000634433 CSPG4Q6UVK1 2322 aa5.46□□□□□ -1.54
BRCA1-230ENST00000634433 IGHV3OR16-13A0A075B7E8 117 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 IGHV3-74A0A0B4J1X5 117 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 ATP5LO75964 103 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 GDF5OSQ5U4N7 250 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 CD164L2Q6UWJ8 174 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 GPHB5Q86YW7 130 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 KCNS1Q96KK3 526 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 LENEPQ9Y5L5 61 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 POLQO75417 2590 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 CRYBG3Q68DQ2 2970 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 IGHV3-49A0A0A0MS15 119 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 IGHV7-4-1A0A0J9YVY3 117 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 OVOL1O14753 267 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 TRBV12-3P01733 135 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 GZMBP10144 247 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 HLA-DMBP28068 263 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 ZNF138P52744 262 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 HIST1H1AQ02539 215 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-230ENST00000634433 IGFL4Q6B9Z1 124 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 C9orf47Q6ZRZ4 202 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 FAM19A1Q7Z5A9 133 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 GATD1Q8NB37 220 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 DAZ1Q9NQZ3 744 aaKnown RBP5.45□□□□□ -1.54
BRCA1-230ENST00000634433 TP53TG3Q9ULZ0 132 aa5.45□□□□□ -1.54
BRCA1-230ENST00000634433 PRRC2AP48634 2157 aaKnown RBP5.44□□□□□ -1.54
BRCA1-230ENST00000634433 TRAV8-2A0A0B4J237 113 aa5.44□□□□□ -1.54
BRCA1-230ENST00000634433 NUPR1O60356 82 aa5.44□□□□□ -1.54
BRCA1-230ENST00000634433 UNQ9165/PRO28630Q6UXU0 137 aa5.44□□□□□ -1.54
BRCA1-230ENST00000634433 TMEM86BQ8N661 226 aa5.44□□□□□ -1.54
BRCA1-230ENST00000634433 RNF182Q8N6D2 247 aa5.44□□□□□ -1.54
BRCA1-230ENST00000634433 C18orf32Q8TCD1 76 aa5.44□□□□□ -1.54
BRCA1-230ENST00000634433 LINC00477Q96M19 166 aa5.44□□□□□ -1.54
BRCA1-230ENST00000634433 TCF21O43680 179 aa5.44□□□□□ -1.54
BRCA1-230ENST00000634433 GPX1P07203 203 aa5.44□□□□□ -1.54
BRCA1-230ENST00000634433 ERCC8Q13216 396 aa5.44□□□□□ -1.54
BRCA1-230ENST00000634433 OR10J6PQ8NGY7 276 aa5.44□□□□□ -1.54
BRCA1-230ENST00000634433 SSBP4Q9BWG4 385 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-230ENST00000634433 NRN1Q9NPD7 142 aa5.44□□□□□ -1.54
BRCA1-230ENST00000634433 AKAP9Q99996 3911 aa5.44□□□□□ -1.54
BRCA1-230ENST00000634433 LOC102724200A0A096LPH7 203 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-230ENST00000634433 PRAC2D3DTV9 90 aa5.43□□□□□ -1.54
BRCA1-230ENST00000634433 F2Z2F3 143 aa5.43□□□□□ -1.54
BRCA1-230ENST00000634433 F5H697 171 aa5.43□□□□□ -1.54
BRCA1-230ENST00000634433 HOXA3O43365 443 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-230ENST00000634433 ZNF324O75467 553 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-230ENST00000634433 PKIAP61925 76 aa5.43□□□□□ -1.54
BRCA1-230ENST00000634433 FER1L6-AS1Q8NA97 138 aa5.43□□□□□ -1.54
BRCA1-230ENST00000634433 Q8TAT8 98 aa5.43□□□□□ -1.54
BRCA1-230ENST00000634433 RHPN1-AS1Q9BWJ2 59 aa5.43□□□□□ -1.54
BRCA1-230ENST00000634433 AGPAT4-IT1Q9H0P7 198 aa5.43□□□□□ -1.54
BRCA1-230ENST00000634433 SVEP1Q4LDE5 3571 aa5.43□□□□□ -1.54
BRCA1-230ENST00000634433 MAP1AP78559 2803 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-230ENST00000634433 FBN3Q75N90 2809 aa5.43□□□□□ -1.54
BRCA1-230ENST00000634433 TSTD3H0UI37 97 aa5.43□□□□□ -1.54
BRCA1-230ENST00000634433 ARMS2P0C7Q2 107 aa5.43□□□□□ -1.54
BRCA1-230ENST00000634433 AMTP48728 403 aa5.43□□□□□ -1.54
BRCA1-230ENST00000634433 LINC00310P59036 64 aa5.43□□□□□ -1.54
BRCA1-230ENST00000634433 LYZL1Q6UWQ5 148 aa5.43□□□□□ -1.54
BRCA1-230ENST00000634433 ZNF493Q6ZR52 646 aa5.43□□□□□ -1.54
BRCA1-230ENST00000634433 KRTAP1-3Q8IUG1 177 aa5.43□□□□□ -1.54
BRCA1-230ENST00000634433 ZNF702PQ9H963 129 aa5.43□□□□□ -1.54
BRCA1-230ENST00000634433 CELSR2Q9HCU4 2923 aa5.43□□□□□ -1.54
BRCA1-230ENST00000634433 LGALS1P09382 135 aaKnown RBP5.42□□□□□ -1.54
BRCA1-230ENST00000634433 LCNL1Q6ZST4 164 aa5.42□□□□□ -1.54
BRCA1-230ENST00000634433 Q8N2B8 174 aa5.42□□□□□ -1.54
BRCA1-230ENST00000634433 CHCHD1Q96BP2 118 aaKnown RBP5.42□□□□□ -1.54
BRCA1-230ENST00000634433 UBE2E2Q96LR5 201 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms