RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 RPS20P60866 119 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-223ENST00000627587 COX19Q49B96 90 aa7.05□□□□□ -1.28
PDLIM5-223ENST00000627587 FOXI2Q6ZQN5 318 aa7.05□□□□□ -1.28
PDLIM5-223ENST00000627587 ZFAND2AQ8N6M9 145 aa7.05□□□□□ -1.28
PDLIM5-223ENST00000627587 SAV1Q9H4B6 383 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-223ENST00000627587 C11orf21Q9P2W6 132 aa7.05□□□□□ -1.28
PDLIM5-223ENST00000627587 DUSP14O95147 198 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 ORM1P02763 201 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 GPX1P07203 203 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 CRISP2P16562 243 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 DEFB131AP59861 70 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 KIR3DS1Q14943 382 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 Q6AWC8 147 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 MRPL54Q6P161 138 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 ATP5L2Q7Z4Y8 100 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 ZNF256Q9Y2P7 627 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 TRAPPC1Q9Y5R8 145 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 RYR3Q15413 4870 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 TMSB15BA0A087X1C1 80 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 J3KRW8 73 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 FOXA3P55318 350 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 LINC01559Q495D7 138 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 WDR73Q6P4I2 378 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 RASL11AQ6T310 242 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 APRG1Q8IVJ8 170 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 LINC00482Q8N8I6 264 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 FRZBQ92765 325 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 PGLYRP4Q96LB8 373 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 ODF3Q96PU9 254 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 GNB1LQ9BYB4 327 aa7.04□□□□□ -1.28
PDLIM5-223ENST00000627587 TRAV21A0A0B4J279 112 aa7.03□□□□□ -1.28
PDLIM5-223ENST00000627587 SNURFLB1AK76 121 aa7.03□□□□□ -1.28
PDLIM5-223ENST00000627587 MT-ND6P03923 174 aa7.03□□□□□ -1.28
PDLIM5-223ENST00000627587 FABP9Q0Z7S8 132 aa7.03□□□□□ -1.28
PDLIM5-223ENST00000627587 ACTL10Q5JWF8 245 aa7.03□□□□□ -1.28
PDLIM5-223ENST00000627587 TENM3Q9P273 2699 aa7.03□□□□□ -1.28
PDLIM5-223ENST00000627587 IGKV3D-20A0A0C4DH25 116 aa7.02□□□□□ -1.28
PDLIM5-223ENST00000627587 IGLV1-51P01701 117 aa7.02□□□□□ -1.28
PDLIM5-223ENST00000627587 LEPP41159 167 aa7.02□□□□□ -1.28
PDLIM5-223ENST00000627587 RAB4BP61018 213 aa7.02□□□□□ -1.28
PDLIM5-223ENST00000627587 ZNF124Q15973 351 aa7.02□□□□□ -1.28
PDLIM5-223ENST00000627587 OR2K2Q8NGT1 345 aa7.02□□□□□ -1.28
PDLIM5-223ENST00000627587 BORCS7Q96B45 105 aa7.02□□□□□ -1.28
PDLIM5-223ENST00000627587 TPPP3Q9BW30 176 aa7.02□□□□□ -1.28
PDLIM5-223ENST00000627587 MAP6D1Q9H9H5 199 aa7.02□□□□□ -1.28
PDLIM5-223ENST00000627587 COL7A1Q02388 2944 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 A0A1B0GUT8 65 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 A0A1B0GXF2 115 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 KLLNB2CW77 178 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 HIST1H2BKO60814 126 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 IGKV3-20P01619 116 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 HLA-DQA1P01909 254 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 HIST1H2BJP06899 126 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 TRGC1P0CF51 173 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 HLA-DRB4P13762 266 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 HIST1H2BOP23527 126 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 TSPOP30536 169 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 HIST1H2BBP33778 126 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 RNASE4P34096 147 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 HIST1H2BDP58876 126 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 SSTP61278 116 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 HIST1H2BCP62807 126 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 HBBP68871 147 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 HIST2H2BEQ16778 126 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 AMTNQ6UX39 209 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 FER1L6-AS1Q8NA97 138 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 HIST1H2BHQ93079 126 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 HIST1H2BNQ99877 126 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 HIST1H2BMQ99879 126 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 HLA-DRB4X5D2U9 266 aa7.02□□□□□ -1.29
PDLIM5-223ENST00000627587 KNCNA6PVL3 124 aa7.01□□□□□ -1.29
PDLIM5-223ENST00000627587 A8MTW9 85 aa7.01□□□□□ -1.29
PDLIM5-223ENST00000627587 C3orf84H3BNL1 204 aa7.01□□□□□ -1.29
PDLIM5-223ENST00000627587 CDKN1BP46527 198 aa7.01□□□□□ -1.29
PDLIM5-223ENST00000627587 CAMPP49913 170 aa7.01□□□□□ -1.29
PDLIM5-223ENST00000627587 TMEM136Q6ZRR5 245 aa7.01□□□□□ -1.29
PDLIM5-223ENST00000627587 MRPL18Q9H0U6 180 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-223ENST00000627587 U3KQK5 164 aa7.01□□□□□ -1.29
PDLIM5-223ENST00000627587 GRIFINA4D1Z8 144 aa7□□□□□ -1.29
PDLIM5-223ENST00000627587 OR11H12B2RN74 326 aa7□□□□□ -1.29
PDLIM5-223ENST00000627587 H3BMM0 161 aa7□□□□□ -1.29
PDLIM5-223ENST00000627587 ARMS2P0C7Q2 107 aa7□□□□□ -1.29
PDLIM5-223ENST00000627587 IGLC6P0CF74 106 aa7□□□□□ -1.29
PDLIM5-223ENST00000627587 CMC4P56277 68 aaPredicted RBP7□□□□□ -1.29
PDLIM5-223ENST00000627587 RIGQ13278 110 aa7□□□□□ -1.29
PDLIM5-223ENST00000627587 ODF3L2Q3SX64 289 aa7□□□□□ -1.29
PDLIM5-223ENST00000627587 LYZL1Q6UWQ5 148 aa7□□□□□ -1.29
PDLIM5-223ENST00000627587 NAGKQ9UJ70 344 aa7□□□□□ -1.29
PDLIM5-223ENST00000627587 A0A1B0GW15 77 aa7□□□□□ -1.29
PDLIM5-223ENST00000627587 C7orf71A4D174 169 aa7□□□□□ -1.29
PDLIM5-223ENST00000627587 RBMY1BA6NDE4 496 aaKnown RBP7□□□□□ -1.29
PDLIM5-223ENST00000627587 RBMY1EA6NEQ0 496 aaKnown RBP7□□□□□ -1.29
PDLIM5-223ENST00000627587 M0R2Z0 102 aa7□□□□□ -1.29
PDLIM5-223ENST00000627587 S100A8P05109 93 aa7□□□□□ -1.29
PDLIM5-223ENST00000627587 RBMY1DP0C7P1 496 aaKnown RBP7□□□□□ -1.29
PDLIM5-223ENST00000627587 CTRLP40313 264 aa7□□□□□ -1.29
PDLIM5-223ENST00000627587 S100A12P80511 92 aa7□□□□□ -1.29
PDLIM5-223ENST00000627587 SPINK13Q1W4C9 94 aa7□□□□□ -1.29
PDLIM5-223ENST00000627587 CFAP161Q6P656 301 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 259.5 ms