RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 DEFB109BQ30KR1 87 aa11.76□□□□□ -0.53
PMS1-221ENST00000624204 SEM1Q6ZVN7 128 aa11.76□□□□□ -0.53
PMS1-221ENST00000624204 BDP1A6H8Y1 2624 aa11.75□□□□□ -0.53
PMS1-221ENST00000624204 SLC25A16P16260 332 aa11.75□□□□□ -0.53
PMS1-221ENST00000624204 ZNF575Q86XF7 245 aa11.75□□□□□ -0.53
PMS1-221ENST00000624204 TLN1Q9Y490 2541 aaKnown RBP11.75□□□□□ -0.53
PMS1-221ENST00000624204 SPG11Q96JI7 2443 aa11.75□□□□□ -0.53
PMS1-221ENST00000624204 LINC01546A6NGU7 62 aa11.75□□□□□ -0.53
PMS1-221ENST00000624204 PRAC2D3DTV9 90 aa11.75□□□□□ -0.53
PMS1-221ENST00000624204 TCL1BO95988 128 aa11.75□□□□□ -0.53
PMS1-221ENST00000624204 IL17RELQ6ZVW7 336 aa11.75□□□□□ -0.53
PMS1-221ENST00000624204 DYNAPQ8N1N2 210 aa11.75□□□□□ -0.53
PMS1-221ENST00000624204 C17orf100A8MU93 164 aa11.74□□□□□ -0.53
PMS1-221ENST00000624204 ANKRD29Q8N6D5 301 aa11.74□□□□□ -0.53
PMS1-221ENST00000624204 TMEM155Q4W5P6 130 aa11.74□□□□□ -0.53
PMS1-221ENST00000624204 CFAP161Q6P656 301 aa11.74□□□□□ -0.53
PMS1-221ENST00000624204 DCHS2Q6V1P9 2916 aa11.74□□□□□ -0.53
PMS1-221ENST00000624204 TMEM178BH3BS89 294 aa11.74□□□□□ -0.53
PMS1-221ENST00000624204 LY6HO94772 140 aa11.74□□□□□ -0.53
PMS1-221ENST00000624204 Q1RN00 199 aa11.74□□□□□ -0.53
PMS1-221ENST00000624204 LYRM7Q5U5X0 104 aa11.74□□□□□ -0.53
PMS1-221ENST00000624204 TRAV8-2A0A0B4J237 113 aa11.73□□□□□ -0.53
PMS1-221ENST00000624204 DEFB1P60022 68 aa11.73□□□□□ -0.53
PMS1-221ENST00000624204 SMIM20Q8N5G0 67 aa11.73□□□□□ -0.53
PMS1-221ENST00000624204 CNFNQ9BYD5 112 aa11.73□□□□□ -0.53
PMS1-221ENST00000624204 MFAP4P55083 255 aa11.72□□□□□ -0.53
PMS1-221ENST00000624204 NRACQ8N912 160 aa11.72□□□□□ -0.53
PMS1-221ENST00000624204 SHISA2Q6UWI4 295 aa11.72□□□□□ -0.53
PMS1-221ENST00000624204 TMEM190Q8WZ59 177 aa11.72□□□□□ -0.53
PMS1-221ENST00000624204 IGKV3D-20A0A0C4DH25 116 aa11.72□□□□□ -0.53
PMS1-221ENST00000624204 GAGE2BQ13066 116 aa11.72□□□□□ -0.53
PMS1-221ENST00000624204 GAGE2EQ4V326 116 aa11.72□□□□□ -0.53
PMS1-221ENST00000624204 C8orf31Q8N9H6 132 aa11.72□□□□□ -0.53
PMS1-221ENST00000624204 RAB1BQ9H0U4 201 aa11.72□□□□□ -0.53
PMS1-221ENST00000624204 GAGE2DQ9UEU5 116 aa11.72□□□□□ -0.53
PMS1-221ENST00000624204 ANKHD1Q8IWZ3 2542 aaKnown RBP11.71□□□□□ -0.53
PMS1-221ENST00000624204 TRAV17A0A0B4J275 112 aa11.71□□□□□ -0.53
PMS1-221ENST00000624204 BUB1B-PAK6H3BSN5 160 aa11.71□□□□□ -0.53
PMS1-221ENST00000624204 DLX6P56179 175 aa11.71□□□□□ -0.53
PMS1-221ENST00000624204 Q6ZS92 163 aa11.71□□□□□ -0.53
PMS1-221ENST00000624204 SNCGO76070 127 aa11.71□□□□□ -0.54
PMS1-221ENST00000624204 HERV-K104P63124 156 aa11.71□□□□□ -0.54
PMS1-221ENST00000624204 C11orf21Q9P2W6 132 aa11.71□□□□□ -0.54
PMS1-221ENST00000624204 IGHV4-39P01824 125 aa11.7□□□□□ -0.54
PMS1-221ENST00000624204 OR11H6Q8NGC7 330 aa11.7□□□□□ -0.54
PMS1-221ENST00000624204 ATRXP46100 2492 aa11.7□□□□□ -0.54
PMS1-221ENST00000624204 TIMM23O14925 209 aa11.7□□□□□ -0.54
PMS1-221ENST00000624204 UBE2D1P51668 147 aa11.7□□□□□ -0.54
PMS1-221ENST00000624204 TDHQ8IZJ6 230 aa11.7□□□□□ -0.54
PMS1-221ENST00000624204 C9JAW5 83 aa11.7□□□□□ -0.54
PMS1-221ENST00000624204 TMEM262E9PQX1 116 aa11.7□□□□□ -0.54
PMS1-221ENST00000624204 IGHG4P01861 327 aa11.7□□□□□ -0.54
PMS1-221ENST00000624204 UBE2D3P61077 147 aa11.7□□□□□ -0.54
PMS1-221ENST00000624204 UBE2D2P62837 147 aa11.7□□□□□ -0.54
PMS1-221ENST00000624204 ADIPOQQ15848 244 aa11.7□□□□□ -0.54
PMS1-221ENST00000624204 TTC32Q5I0X7 151 aa11.7□□□□□ -0.54
PMS1-221ENST00000624204 SMIM2Q9BVW6 85 aa11.7□□□□□ -0.54
PMS1-221ENST00000624204 S100A4P26447 101 aaKnown RBP11.69□□□□□ -0.54
PMS1-221ENST00000624204 COX8CQ7Z4L0 72 aa11.69□□□□□ -0.54
PMS1-221ENST00000624204 NDUFA11Q86Y39 141 aa11.69□□□□□ -0.54
PMS1-221ENST00000624204 VCX2Q9H322 139 aa11.69□□□□□ -0.54
PMS1-221ENST00000624204 C21orf62Q9NYP8 219 aa11.69□□□□□ -0.54
PMS1-221ENST00000624204 SMAD5-AS1Q9Y6J3 95 aa11.69□□□□□ -0.54
PMS1-221ENST00000624204 RPL11P62913 178 aaKnown RBP11.69□□□□□ -0.54
PMS1-221ENST00000624204 TECTAO75443 2155 aa11.68□□□□□ -0.54
PMS1-221ENST00000624204 NACAE9PAV3 2078 aa11.68□□□□□ -0.54
PMS1-221ENST00000624204 CCDC179H3BU77 68 aa11.68□□□□□ -0.54
PMS1-221ENST00000624204 IGLV1-47P01700 117 aa11.68□□□□□ -0.54
PMS1-221ENST00000624204 TMEM170BQ5T4T1 132 aa11.68□□□□□ -0.54
PMS1-221ENST00000624204 TRPT1Q86TN4 253 aaKnown RBP11.68□□□□□ -0.54
PMS1-221ENST00000624204 RPL39LQ96EH5 51 aaKnown RBP11.68□□□□□ -0.54
PMS1-221ENST00000624204 TRAV12-1A0A0B4J245 112 aa11.68□□□□□ -0.54
PMS1-221ENST00000624204 TRBV7-9A0A0J9YWB2 115 aa11.68□□□□□ -0.54
PMS1-221ENST00000624204 MBD3L4A6NDZ8 208 aaPredicted RBP11.68□□□□□ -0.54
PMS1-221ENST00000624204 MBD3L3A6NE82 208 aaPredicted RBP11.68□□□□□ -0.54
PMS1-221ENST00000624204 MBD3L5A6NJ08 208 aaPredicted RBP11.68□□□□□ -0.54
PMS1-221ENST00000624204 LINC01619G3V211 115 aa11.68□□□□□ -0.54
PMS1-221ENST00000624204 NDPQ00604 133 aa11.68□□□□□ -0.54
PMS1-221ENST00000624204 MBD3L2Q8NHZ7 208 aaPredicted RBP11.68□□□□□ -0.54
PMS1-221ENST00000624204 AJUBAQ96IF1 538 aa11.68□□□□□ -0.54
PMS1-221ENST00000624204 TRAV4A0A0B4J268 109 aa11.67□□□□□ -0.54
PMS1-221ENST00000624204 CD7P09564 240 aa11.67□□□□□ -0.54
PMS1-221ENST00000624204 NHLRC4P0CG21 123 aaPredicted RBP11.67□□□□□ -0.54
PMS1-221ENST00000624204 NPC2P61916 151 aa11.67□□□□□ -0.54
PMS1-221ENST00000624204 C14orf178Q8N769 122 aaPredicted RBP11.67□□□□□ -0.54
PMS1-221ENST00000624204 SLC25A20O43772 301 aa11.67□□□□□ -0.54
PMS1-221ENST00000624204 C2orf66Q6UXQ4 117 aa11.67□□□□□ -0.54
PMS1-221ENST00000624204 ASCL5Q7RTU5 278 aa11.67□□□□□ -0.54
PMS1-221ENST00000624204 NEXN-AS1Q8NBZ9 246 aa11.67□□□□□ -0.54
PMS1-221ENST00000624204 RASL10AQ92737 203 aa11.67□□□□□ -0.54
PMS1-221ENST00000624204 GAGE12JA6NER3 117 aa11.67□□□□□ -0.54
PMS1-221ENST00000624204 GAGE7O76087 117 aa11.67□□□□□ -0.54
PMS1-221ENST00000624204 GAGE12FP0CL80 117 aa11.67□□□□□ -0.54
PMS1-221ENST00000624204 GAGE12GP0CL81 117 aa11.67□□□□□ -0.54
PMS1-221ENST00000624204 GAGE12IP0CL82 117 aa11.67□□□□□ -0.54
PMS1-221ENST00000624204 GAGE4Q13068 117 aa11.67□□□□□ -0.54
PMS1-221ENST00000624204 ECSCRQ19T08 205 aa11.67□□□□□ -0.54
PMS1-221ENST00000624204 BAALCQ8WXS3 180 aa11.67□□□□□ -0.54
PMS1-221ENST00000624204 NDUFV3P56181 108 aaKnown RBP11.66□□□□□ -0.54
PMS1-221ENST00000624204 BSPH1Q075Z2 132 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms