RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 NDUFA6P56556 154 aa13.09□□□□□ -0.31
PTCHD3-202ENST00000622555 NUTF2P61970 127 aaKnown RBP13.09□□□□□ -0.31
PTCHD3-202ENST00000622555 C7orf71A4D174 169 aa13.08□□□□□ -0.32
PTCHD3-202ENST00000622555 S100A8P05109 93 aa13.08□□□□□ -0.32
PTCHD3-202ENST00000622555 IBA57Q5T440 356 aaKnown RBP13.08□□□□□ -0.32
PTCHD3-202ENST00000622555 GFI1BQ5VTD9 330 aa13.08□□□□□ -0.32
PTCHD3-202ENST00000622555 FAM231DQ6ZW35 169 aa13.08□□□□□ -0.32
PTCHD3-202ENST00000622555 NOTCH1P46531 2555 aa13.08□□□□□ -0.32
PTCHD3-202ENST00000622555 C19orf71A6NCJ1 209 aa13.08□□□□□ -0.32
PTCHD3-202ENST00000622555 FABP5P3A8MUU1 101 aa13.08□□□□□ -0.32
PTCHD3-202ENST00000622555 NUDT10Q8NFP7 164 aa13.08□□□□□ -0.32
PTCHD3-202ENST00000622555 NUDT11Q96G61 164 aa13.08□□□□□ -0.32
PTCHD3-202ENST00000622555 TRAV12-3A0A0B4J271 114 aa13.07□□□□□ -0.32
PTCHD3-202ENST00000622555 P01737 135 aa13.07□□□□□ -0.32
PTCHD3-202ENST00000622555 Q6ZQT7 251 aa13.07□□□□□ -0.32
PTCHD3-202ENST00000622555 XCL2Q9UBD3 114 aa13.07□□□□□ -0.32
PTCHD3-202ENST00000622555 TRAV21A0A0B4J279 112 aa13.06□□□□□ -0.32
PTCHD3-202ENST00000622555 IFITM10A6NMD0 228 aa13.06□□□□□ -0.32
PTCHD3-202ENST00000622555 CRXO43186 299 aaPredicted RBP13.06□□□□□ -0.32
PTCHD3-202ENST00000622555 AMBPP02760 352 aa13.06□□□□□ -0.32
PTCHD3-202ENST00000622555 COA6Q5JTJ3 125 aaKnown RBP13.06□□□□□ -0.32
PTCHD3-202ENST00000622555 Q6AWC8 147 aa13.06□□□□□ -0.32
PTCHD3-202ENST00000622555 MORN3Q6PF18 240 aaPredicted RBP13.06□□□□□ -0.32
PTCHD3-202ENST00000622555 ZNF705GA8MUZ8 300 aaPredicted RBP13.05□□□□□ -0.32
PTCHD3-202ENST00000622555 GATCO43716 136 aaKnown RBP13.05□□□□□ -0.32
PTCHD3-202ENST00000622555 IGHV4-30-4P0DP06 118 aa13.05□□□□□ -0.32
PTCHD3-202ENST00000622555 LOC102724200A0A096LPH7 203 aaPredicted RBP13.05□□□□□ -0.32
PTCHD3-202ENST00000622555 KPRPQ5T749 579 aaPredicted RBP13.05□□□□□ -0.32
PTCHD3-202ENST00000622555 CA1P00915 261 aaPredicted RBP13.04□□□□□ -0.32
PTCHD3-202ENST00000622555 INSP01308 110 aa13.04□□□□□ -0.32
PTCHD3-202ENST00000622555 ORM1P02763 201 aa13.04□□□□□ -0.32
PTCHD3-202ENST00000622555 HIST3H2BBQ8N257 126 aa13.04□□□□□ -0.32
PTCHD3-202ENST00000622555 RPP21Q9H633 154 aaKnown RBP13.04□□□□□ -0.32
PTCHD3-202ENST00000622555 NAGKQ9UJ70 344 aa13.04□□□□□ -0.32
PTCHD3-202ENST00000622555 NBEAL1Q6ZS30 2694 aa13.03□□□□□ -0.32
PTCHD3-202ENST00000622555 SMIM27A0A1W2PRY6 76 aa13.03□□□□□ -0.32
PTCHD3-202ENST00000622555 ZNF324O75467 553 aaPredicted RBP13.03□□□□□ -0.32
PTCHD3-202ENST00000622555 GIG44P09565 113 aaPredicted RBP13.03□□□□□ -0.32
PTCHD3-202ENST00000622555 OR2D3Q8NGH3 330 aa13.03□□□□□ -0.32
PTCHD3-202ENST00000622555 CSTL1Q9H114 145 aa13.03□□□□□ -0.32
PTCHD3-202ENST00000622555 C11orf21Q9P2W6 132 aa13.03□□□□□ -0.32
PTCHD3-202ENST00000622555 TMEM189A5PLL7 270 aa13.02□□□□□ -0.32
PTCHD3-202ENST00000622555 PRB2P02812 416 aaPredicted RBP13.02□□□□□ -0.32
PTCHD3-202ENST00000622555 RPL19P84098 196 aaKnown RBP13.02□□□□□ -0.32
PTCHD3-202ENST00000622555 MUC21Q5SSG8 566 aa13.02□□□□□ -0.32
PTCHD3-202ENST00000622555 C1QTNF4Q9BXJ3 329 aa13.02□□□□□ -0.32
PTCHD3-202ENST00000622555 TMSB15BA0A087X1C1 80 aa13.02□□□□□ -0.33
PTCHD3-202ENST00000622555 SMIM6P0DI80 62 aa13.02□□□□□ -0.33
PTCHD3-202ENST00000622555 RBMY1A1P0DJD3 496 aaKnown RBP13.02□□□□□ -0.33
PTCHD3-202ENST00000622555 RBMY1CP0DJD4 496 aa13.02□□□□□ -0.33
PTCHD3-202ENST00000622555 RBMY1FQ15415 496 aaKnown RBP13.02□□□□□ -0.33
PTCHD3-202ENST00000622555 C12orf57Q99622 126 aa13.02□□□□□ -0.33
PTCHD3-202ENST00000622555 TRAPPC1Q9Y5R8 145 aa13.02□□□□□ -0.33
PTCHD3-202ENST00000622555 APOC4P55056 127 aa13.01□□□□□ -0.33
PTCHD3-202ENST00000622555 LINC01559Q495D7 138 aa13.01□□□□□ -0.33
PTCHD3-202ENST00000622555 KIR2DL5BA0A0G2JN68 375 aa13□□□□□ -0.33
PTCHD3-202ENST00000622555 KIR2DL5BA0A0G2JPC4 375 aa13□□□□□ -0.33
PTCHD3-202ENST00000622555 KIR2DL5AQ8N109 375 aa13□□□□□ -0.33
PTCHD3-202ENST00000622555 KIR2DL5BQ8NHK3 375 aa13□□□□□ -0.33
PTCHD3-202ENST00000622555 C20orf144Q9BQM9 153 aa13□□□□□ -0.33
PTCHD3-202ENST00000622555 IGKV3D-20A0A0C4DH25 116 aa12.99□□□□□ -0.33
PTCHD3-202ENST00000622555 ANXA2RQ3ZCQ2 193 aa12.99□□□□□ -0.33
PTCHD3-202ENST00000622555 CT83Q5H943 113 aa12.99□□□□□ -0.33
PTCHD3-202ENST00000622555 FAM159AQ6UWV7 190 aa12.99□□□□□ -0.33
PTCHD3-202ENST00000622555 TMEM208Q9BTX3 173 aa12.99□□□□□ -0.33
PTCHD3-202ENST00000622555 A8MWL6 223 aa12.99□□□□□ -0.33
PTCHD3-202ENST00000622555 A8MZ25 164 aa12.99□□□□□ -0.33
PTCHD3-202ENST00000622555 COX19Q49B96 90 aa12.99□□□□□ -0.33
PTCHD3-202ENST00000622555 LINC01587Q99440 93 aa12.99□□□□□ -0.33
PTCHD3-202ENST00000622555 GNB1LQ9BYB4 327 aa12.99□□□□□ -0.33
PTCHD3-202ENST00000622555 IGHV3OR16-12A0A075B7B8 117 aa12.98□□□□□ -0.33
PTCHD3-202ENST00000622555 IGHV1OR15-1A0A075B7D0 117 aa12.98□□□□□ -0.33
PTCHD3-202ENST00000622555 XKRY2A2RUG3 117 aa12.98□□□□□ -0.33
PTCHD3-202ENST00000622555 GZMBP10144 247 aa12.98□□□□□ -0.33
PTCHD3-202ENST00000622555 RPS20P60866 119 aaKnown RBP12.98□□□□□ -0.33
PTCHD3-202ENST00000622555 C1orf158Q8N1D5 194 aa12.98□□□□□ -0.33
PTCHD3-202ENST00000622555 GOLT1BQ9Y3E0 138 aa12.98□□□□□ -0.33
PTCHD3-202ENST00000622555 GRIFINA4D1Z8 144 aa12.97□□□□□ -0.33
PTCHD3-202ENST00000622555 HTN1P15515 57 aa12.97□□□□□ -0.33
PTCHD3-202ENST00000622555 TCL1AP56279 114 aa12.97□□□□□ -0.33
PTCHD3-202ENST00000622555 TMEM256Q8N2U0 113 aa12.97□□□□□ -0.33
PTCHD3-202ENST00000622555 CSNK1G2-AS1Q8NCQ2 148 aa12.97□□□□□ -0.33
PTCHD3-202ENST00000622555 TSKUQ8WUA8 353 aa12.97□□□□□ -0.33
PTCHD3-202ENST00000622555 KCNS1Q96KK3 526 aa12.97□□□□□ -0.33
PTCHD3-202ENST00000622555 DNHD1Q96M86 4753 aa12.97□□□□□ -0.33
PTCHD3-202ENST00000622555 FRMD6-AS1P0C7T7 363 aa12.96□□□□□ -0.33
PTCHD3-202ENST00000622555 DNAH3Q8TD57 4116 aa12.96□□□□□ -0.33
PTCHD3-202ENST00000622555 K7EIL1 84 aa12.96□□□□□ -0.34
PTCHD3-202ENST00000622555 TDRG1Q3Y452 100 aa12.96□□□□□ -0.34
PTCHD3-202ENST00000622555 WDR73Q6P4I2 378 aa12.96□□□□□ -0.34
PTCHD3-202ENST00000622555 CBY3A6NI87 242 aa12.95□□□□□ -0.34
PTCHD3-202ENST00000622555 GNRH2O43555 120 aa12.95□□□□□ -0.34
PTCHD3-202ENST00000622555 MT-ND6P03923 174 aa12.95□□□□□ -0.34
PTCHD3-202ENST00000622555 S100A2P29034 98 aa12.95□□□□□ -0.34
PTCHD3-202ENST00000622555 TMEM136Q6ZRR5 245 aa12.95□□□□□ -0.34
PTCHD3-202ENST00000622555 ZNF575Q86XF7 245 aa12.95□□□□□ -0.34
PTCHD3-202ENST00000622555 NEU1Q99519 415 aa12.95□□□□□ -0.34
PTCHD3-202ENST00000622555 MRPL18Q9H0U6 180 aaKnown RBP12.95□□□□□ -0.34
PTCHD3-202ENST00000622555 TP53TG3Q9ULZ0 132 aa12.95□□□□□ -0.34
PTCHD3-202ENST00000622555 RASL11AQ6T310 242 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms