RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 PTPRQQ9UMZ3 2332 aa10.07□□□□□ -0.8
CHD1L-210ENST00000622533 TIMD4Q96H15 378 aa10.07□□□□□ -0.8
CHD1L-210ENST00000622533 ODF3BA8MYP8 253 aa10.06□□□□□ -0.8
CHD1L-210ENST00000622533 OOSP1A8MZH6 123 aa10.06□□□□□ -0.8
CHD1L-210ENST00000622533 DTX2Q86UW9 622 aa10.06□□□□□ -0.8
CHD1L-210ENST00000622533 DLX4Q92988 240 aaPredicted RBP10.06□□□□□ -0.8
CHD1L-210ENST00000622533 KLK15Q9H2R5 256 aa10.06□□□□□ -0.8
CHD1L-210ENST00000622533 B5MCH6 92 aa10.06□□□□□ -0.8
CHD1L-210ENST00000622533 HLA-DRB4P13762 266 aa10.06□□□□□ -0.8
CHD1L-210ENST00000622533 KIR2DL4Q99706 377 aa10.06□□□□□ -0.8
CHD1L-210ENST00000622533 HLA-DRB4X5D2U9 266 aa10.06□□□□□ -0.8
CHD1L-210ENST00000622533 FAM90A27PA6NNH2 459 aa10.06□□□□□ -0.8
CHD1L-210ENST00000622533 FABP5P3A8MUU1 101 aa10.06□□□□□ -0.8
CHD1L-210ENST00000622533 F8W735 103 aaPredicted RBP10.06□□□□□ -0.8
CHD1L-210ENST00000622533 TRGV3P03979 118 aa10.06□□□□□ -0.8
CHD1L-210ENST00000622533 Q8N8P6 123 aa10.06□□□□□ -0.8
CHD1L-210ENST00000622533 CELSR1Q9NYQ6 3014 aa10.05□□□□□ -0.8
CHD1L-210ENST00000622533 IGLV2-18A0A075B6J9 118 aa10.05□□□□□ -0.8
CHD1L-210ENST00000622533 A0A087WX48 190 aa10.05□□□□□ -0.8
CHD1L-210ENST00000622533 MYMXA0A1B0GTQ4 84 aa10.05□□□□□ -0.8
CHD1L-210ENST00000622533 PRTN3P24158 256 aa10.05□□□□□ -0.8
CHD1L-210ENST00000622533 OR11H12B2RN74 326 aa10.05□□□□□ -0.8
CHD1L-210ENST00000622533 OR11H1Q8NG94 326 aa10.05□□□□□ -0.8
CHD1L-210ENST00000622533 OR11H2Q8NH07 326 aa10.05□□□□□ -0.8
CHD1L-210ENST00000622533 UFC1Q9Y3C8 167 aa10.05□□□□□ -0.8
CHD1L-210ENST00000622533 IGHV3OR16-8A0A075B7F1 116 aa10.04□□□□□ -0.8
CHD1L-210ENST00000622533 RBAKDNA6NC62 111 aa10.04□□□□□ -0.8
CHD1L-210ENST00000622533 H3BVH4 76 aa10.04□□□□□ -0.8
CHD1L-210ENST00000622533 ERCC8Q13216 396 aa10.04□□□□□ -0.8
CHD1L-210ENST00000622533 SPG11Q96JI7 2443 aa10.04□□□□□ -0.8
CHD1L-210ENST00000622533 LGALS1P09382 135 aaKnown RBP10.04□□□□□ -0.8
CHD1L-210ENST00000622533 ATP6V0E2Q8NHE4 81 aa10.04□□□□□ -0.8
CHD1L-210ENST00000622533 ZFYVE26Q68DK2 2539 aa10.03□□□□□ -0.8
CHD1L-210ENST00000622533 LAGE3Q14657 143 aa10.03□□□□□ -0.8
CHD1L-210ENST00000622533 C1orf122Q6ZSJ8 110 aa10.03□□□□□ -0.8
CHD1L-210ENST00000622533 WNK2Q9Y3S1 2297 aa10.03□□□□□ -0.8
CHD1L-210ENST00000622533 CRYBG3Q68DQ2 2970 aa10.03□□□□□ -0.8
CHD1L-210ENST00000622533 VPS13CQ709C8 3753 aa10.03□□□□□ -0.8
CHD1L-210ENST00000622533 IGHV3-23P01764 117 aa10.03□□□□□ -0.8
CHD1L-210ENST00000622533 CTSGP08311 255 aa10.03□□□□□ -0.8
CHD1L-210ENST00000622533 EBI3Q14213 229 aa10.03□□□□□ -0.8
CHD1L-210ENST00000622533 MINOS1Q5TGZ0 78 aa10.03□□□□□ -0.8
CHD1L-210ENST00000622533 PLEKHB2Q96CS7 222 aa10.03□□□□□ -0.8
CHD1L-210ENST00000622533 MINOS1-NBL1R4GNA1 71 aa10.03□□□□□ -0.8
CHD1L-210ENST00000622533 CACNA1BQ00975 2339 aa10.02□□□□□ -0.8
CHD1L-210ENST00000622533 FBXL19-AS1Q494R0 122 aa10.02□□□□□ -0.81
CHD1L-210ENST00000622533 TMEM78Q5T7P6 136 aa10.02□□□□□ -0.81
CHD1L-210ENST00000622533 Q8N6K4 173 aa10.02□□□□□ -0.81
CHD1L-210ENST00000622533 SLC50A1Q9BRV3 221 aa10.02□□□□□ -0.81
CHD1L-210ENST00000622533 SMAD5-AS1Q9Y6J3 95 aa10.02□□□□□ -0.81
CHD1L-210ENST00000622533 PLNP26678 52 aa10.02□□□□□ -0.81
CHD1L-210ENST00000622533 PPDPFLQ8WWR9 84 aa10.02□□□□□ -0.81
CHD1L-210ENST00000622533 CUBNO60494 3623 aa10.02□□□□□ -0.81
CHD1L-210ENST00000622533 GAGE5Q13069 117 aa10.01□□□□□ -0.81
CHD1L-210ENST00000622533 GAGE6Q13070 117 aa10.01□□□□□ -0.81
CHD1L-210ENST00000622533 SRSF9Q13242 221 aaKnown RBP eCLIP10.01□□□□□ -0.81
CHD1L-210ENST00000622533 LINC01560Q8TB33 94 aa10.01□□□□□ -0.81
CHD1L-210ENST00000622533 TCL1BO95988 128 aa10.01□□□□□ -0.81
CHD1L-210ENST00000622533 IGHG4P01861 327 aa10.01□□□□□ -0.81
CHD1L-210ENST00000622533 NDPQ00604 133 aa10.01□□□□□ -0.81
CHD1L-210ENST00000622533 SCGB1D4Q6XE38 83 aa10.01□□□□□ -0.81
CHD1L-210ENST00000622533 TEN1Q86WV5 123 aa10.01□□□□□ -0.81
CHD1L-210ENST00000622533 IGHV3-35A0A0C4DH35 117 aa10□□□□□ -0.81
CHD1L-210ENST00000622533 ZFAND6Q6FIF0 208 aa10□□□□□ -0.81
CHD1L-210ENST00000622533 VMO1Q7Z5L0 202 aa10□□□□□ -0.81
CHD1L-210ENST00000622533 PSMG3-AS1Q96PY0 264 aa10□□□□□ -0.81
CHD1L-210ENST00000622533 RAXQ9Y2V3 346 aa10□□□□□ -0.81
CHD1L-210ENST00000622533 ZNF815PA8K554 130 aa10□□□□□ -0.81
CHD1L-210ENST00000622533 F8VRH5 84 aa10□□□□□ -0.81
CHD1L-210ENST00000622533 H7C1H1 209 aa10□□□□□ -0.81
CHD1L-210ENST00000622533 TEX29Q8N6K0 151 aa10□□□□□ -0.81
CHD1L-210ENST00000622533 NRACQ8N912 160 aa10□□□□□ -0.81
CHD1L-210ENST00000622533 KLHL30-AS1Q8NEE0 82 aa10□□□□□ -0.81
CHD1L-210ENST00000622533 CSMD2Q7Z408 3487 aa10□□□□□ -0.81
CHD1L-210ENST00000622533 PRAC2D3DTV9 90 aa10□□□□□ -0.81
CHD1L-210ENST00000622533 SHISA2Q6UWI4 295 aa10□□□□□ -0.81
CHD1L-210ENST00000622533 DYNAPQ8N1N2 210 aa10□□□□□ -0.81
CHD1L-210ENST00000622533 PRADC1Q9BSG0 188 aa10□□□□□ -0.81
CHD1L-210ENST00000622533 TRBV20-1A0A075B6N2 111 aa9.99□□□□□ -0.81
CHD1L-210ENST00000622533 KLK9Q2XQG4 91 aa9.99□□□□□ -0.81
CHD1L-210ENST00000622533 CFAP161Q6P656 301 aa9.99□□□□□ -0.81
CHD1L-210ENST00000622533 Q6ZQT7 251 aa9.99□□□□□ -0.81
CHD1L-210ENST00000622533 KLK9Q9UKQ9 250 aa9.99□□□□□ -0.81
CHD1L-210ENST00000622533 ZNF688P0C7X2 276 aa9.99□□□□□ -0.81
CHD1L-210ENST00000622533 NHLRC4P0CG21 123 aaPredicted RBP9.99□□□□□ -0.81
CHD1L-210ENST00000622533 SLC25A16P16260 332 aa9.99□□□□□ -0.81
CHD1L-210ENST00000622533 PRR30Q53SZ7 412 aaPredicted RBP9.99□□□□□ -0.81
CHD1L-210ENST00000622533 IL17RELQ6ZVW7 336 aa9.99□□□□□ -0.81
CHD1L-210ENST00000622533 ANKRD29Q8N6D5 301 aa9.99□□□□□ -0.81
CHD1L-210ENST00000622533 FAM110DQ8TAY7 271 aaPredicted RBP9.99□□□□□ -0.81
CHD1L-210ENST00000622533 MRPL53Q96EL3 112 aaKnown RBP9.99□□□□□ -0.81
CHD1L-210ENST00000622533 HIF1ANQ9NWT6 349 aa9.99□□□□□ -0.81
CHD1L-210ENST00000622533 C11orf21Q9P2W6 132 aa9.99□□□□□ -0.81
CHD1L-210ENST00000622533 SPRY2O43597 315 aa9.98□□□□□ -0.81
CHD1L-210ENST00000622533 RNF182Q8N6D2 247 aa9.98□□□□□ -0.81
CHD1L-210ENST00000622533 UTP20O75691 2785 aaKnown RBP9.98□□□□□ -0.81
CHD1L-210ENST00000622533 IGHV7-81A0A0B4J1V7 117 aa9.98□□□□□ -0.81
CHD1L-210ENST00000622533 IGKV3D-20A0A0C4DH25 116 aa9.98□□□□□ -0.81
CHD1L-210ENST00000622533 SCGB3A1Q96QR1 104 aa9.98□□□□□ -0.81
CHD1L-210ENST00000622533 BUB3O43684 328 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms