RNA–Protein interactions for RNA: ENST00000621708.4

PCDH15-233, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-233ENST00000621708 GAGE4Q13068 117 aa6.79□□□□□ -1.32
PCDH15-233ENST00000621708 GAGE5Q13069 117 aa6.79□□□□□ -1.32
PCDH15-233ENST00000621708 GAGE13Q4V321 117 aa6.79□□□□□ -1.32
PCDH15-233ENST00000621708 C2orf66Q6UXQ4 117 aa6.79□□□□□ -1.32
PCDH15-233ENST00000621708 NDUFA11Q86Y39 141 aa6.79□□□□□ -1.32
PCDH15-233ENST00000621708 TIMM21Q9BVV7 248 aa6.79□□□□□ -1.32
PCDH15-233ENST00000621708 SMIM2Q9BVW6 85 aa6.79□□□□□ -1.32
PCDH15-233ENST00000621708 IGKV3D-20A0A0C4DH25 116 aa6.78□□□□□ -1.32
PCDH15-233ENST00000621708 WNK2Q9Y3S1 2297 aa6.78□□□□□ -1.32
PCDH15-233ENST00000621708 PMVKQ15126 192 aa6.78□□□□□ -1.32
PCDH15-233ENST00000621708 PHLDA1Q8WV24 401 aaPredicted RBP6.78□□□□□ -1.32
PCDH15-233ENST00000621708 FANCD2OSQ96PS1 177 aa6.78□□□□□ -1.32
PCDH15-233ENST00000621708 LGALS9O00182 355 aa6.78□□□□□ -1.32
PCDH15-233ENST00000621708 FAM167A-AS1Q96KT0 104 aa6.78□□□□□ -1.32
PCDH15-233ENST00000621708 TP53TG1Q9Y2A0 90 aa6.78□□□□□ -1.32
PCDH15-233ENST00000621708 TRAV2A0A0B4J234 112 aa6.78□□□□□ -1.32
PCDH15-233ENST00000621708 PSCAO43653 123 aa6.78□□□□□ -1.32
PCDH15-233ENST00000621708 C6orf226Q5I0X4 101 aa6.78□□□□□ -1.32
PCDH15-233ENST00000621708 C17orf77Q96MU5 243 aa6.78□□□□□ -1.32
PCDH15-233ENST00000621708 OVOL2Q9BRP0 275 aa6.78□□□□□ -1.32
PCDH15-233ENST00000621708 KLF12Q9Y4X4 402 aa6.77□□□□□ -1.32
PCDH15-233ENST00000621708 KMT2EQ8IZD2 1858 aa6.77□□□□□ -1.33
PCDH15-233ENST00000621708 CRYGBP07316 175 aa6.77□□□□□ -1.33
PCDH15-233ENST00000621708 DEFB136Q30KP8 78 aa6.77□□□□□ -1.33
PCDH15-233ENST00000621708 NEGR1Q7Z3B1 354 aa6.77□□□□□ -1.33
PCDH15-233ENST00000621708 NCOA6Q14686 2063 aaPredicted RBP6.77□□□□□ -1.33
PCDH15-233ENST00000621708 IGHV1-24A0A0C4DH33 117 aa6.77□□□□□ -1.33
PCDH15-233ENST00000621708 SNAI2O43623 268 aa6.77□□□□□ -1.33
PCDH15-233ENST00000621708 ZNRF2Q8NHG8 242 aa6.77□□□□□ -1.33
PCDH15-233ENST00000621708 IGF2BP2-AS1Q96M15 143 aa6.77□□□□□ -1.33
PCDH15-233ENST00000621708 MBD6Q96DN6 1003 aa6.76□□□□□ -1.33
PCDH15-233ENST00000621708 EGR2P11161 476 aaPredicted RBP6.76□□□□□ -1.33
PCDH15-233ENST00000621708 PKIGQ9Y2B9 76 aa6.76□□□□□ -1.33
PCDH15-233ENST00000621708 MED12LQ86YW9 2145 aa6.76□□□□□ -1.33
PCDH15-233ENST00000621708 PAX4O43316 350 aa6.76□□□□□ -1.33
PCDH15-233ENST00000621708 RIPPLY3P57055 190 aa6.76□□□□□ -1.33
PCDH15-233ENST00000621708 ODF3Q96PU9 254 aa6.76□□□□□ -1.33
PCDH15-233ENST00000621708 K7EN84 100 aa6.76□□□□□ -1.33
PCDH15-233ENST00000621708 HLA-DMBP28068 263 aa6.76□□□□□ -1.33
PCDH15-233ENST00000621708 KLF5Q13887 457 aaPredicted RBP6.76□□□□□ -1.33
PCDH15-233ENST00000621708 S100A7L2Q5SY68 101 aa6.76□□□□□ -1.33
PCDH15-233ENST00000621708 SPCS1Q9Y6A9 102 aa6.76□□□□□ -1.33
PCDH15-233ENST00000621708 FREM1Q5H8C1 2179 aa6.76□□□□□ -1.33
PCDH15-233ENST00000621708 LGALS9BQ3B8N2 356 aa6.75□□□□□ -1.33
PCDH15-233ENST00000621708 ZC2HC1BQ5TFG8 222 aa6.75□□□□□ -1.33
PCDH15-233ENST00000621708 LGALS9CQ6DKI2 356 aa6.75□□□□□ -1.33
PCDH15-233ENST00000621708 NHP2Q9NX24 153 aaKnown RBP6.75□□□□□ -1.33
PCDH15-233ENST00000621708 POLR3KQ9Y2Y1 108 aaPredicted RBP6.75□□□□□ -1.33
PCDH15-233ENST00000621708 TRAV13-1A0A0B4J241 112 aa6.75□□□□□ -1.33
PCDH15-233ENST00000621708 IGLC2P0DOY2 106 aa6.75□□□□□ -1.33
PCDH15-233ENST00000621708 ERG28Q9UKR5 140 aa6.75□□□□□ -1.33
PCDH15-233ENST00000621708 PROP1O75360 226 aa6.75□□□□□ -1.33
PCDH15-233ENST00000621708 PLA2G2AP14555 144 aa6.75□□□□□ -1.33
PCDH15-233ENST00000621708 RNASE1P07998 156 aaKnown RBP6.75□□□□□ -1.33
PCDH15-233ENST00000621708 U3KQE9 123 aa6.75□□□□□ -1.33
PCDH15-233ENST00000621708 LEPROTO15243 131 aa6.75□□□□□ -1.33
PCDH15-233ENST00000621708 SPART-AS1P0CW21 52 aa6.75□□□□□ -1.33
PCDH15-233ENST00000621708 Q6ZPA2 131 aa6.75□□□□□ -1.33
PCDH15-233ENST00000621708 F6UB75 175 aa6.74□□□□□ -1.33
PCDH15-233ENST00000621708 CHAC1Q9BUX1 264 aa6.74□□□□□ -1.33
PCDH15-233ENST00000621708 HERVK_113P63121 156 aa6.74□□□□□ -1.33
PCDH15-233ENST00000621708 SIGLEC8Q9NYZ4 499 aa6.74□□□□□ -1.33
PCDH15-233ENST00000621708 ANKHD1Q8IWZ3 2542 aaKnown RBP6.74□□□□□ -1.33
PCDH15-233ENST00000621708 E7EUB6 86 aa6.74□□□□□ -1.33
PCDH15-233ENST00000621708 CFHR3Q02985 330 aa6.74□□□□□ -1.33
PCDH15-233ENST00000621708 PRIMA1Q86XR5 153 aa6.74□□□□□ -1.33
PCDH15-233ENST00000621708 BOD1L2Q8IYS8 172 aa6.74□□□□□ -1.33
PCDH15-233ENST00000621708 IGHV3-16A0A0C4DH30 117 aa6.74□□□□□ -1.33
PCDH15-233ENST00000621708 SFTA2Q6UW10 78 aa6.74□□□□□ -1.33
PCDH15-233ENST00000621708 BRWD1-AS2P59051 145 aa6.73□□□□□ -1.33
PCDH15-233ENST00000621708 WFDC11Q8NEX6 87 aa6.73□□□□□ -1.33
PCDH15-233ENST00000621708 CITED2Q99967 270 aaPredicted RBP6.73□□□□□ -1.33
PCDH15-233ENST00000621708 EML6Q6ZMW3 1958 aa6.73□□□□□ -1.33
PCDH15-233ENST00000621708 SPTAN1Q13813 2472 aaKnown RBP6.73□□□□□ -1.33
PCDH15-233ENST00000621708 IGKV1OR2-108A0A075B7D4 117 aa6.73□□□□□ -1.33
PCDH15-233ENST00000621708 NPYP01303 97 aa6.73□□□□□ -1.33
PCDH15-233ENST00000621708 HLA-DRB4P13762 266 aa6.73□□□□□ -1.33
PCDH15-233ENST00000621708 SPANXA1Q9NS26 97 aa6.73□□□□□ -1.33
PCDH15-233ENST00000621708 HLA-DRB4X5D2U9 266 aa6.73□□□□□ -1.33
PCDH15-233ENST00000621708 CCDC140Q96MF4 163 aa6.73□□□□□ -1.33
PCDH15-233ENST00000621708 JPT2Q9H910 190 aa6.73□□□□□ -1.33
PCDH15-233ENST00000621708 NOP10Q9NPE3 64 aaKnown RBP6.73□□□□□ -1.33
PCDH15-233ENST00000621708 IGKV1D-37A0A075B6S9 117 aa6.73□□□□□ -1.33
PCDH15-233ENST00000621708 ATP5G1P05496 136 aa6.73□□□□□ -1.33
PCDH15-233ENST00000621708 PTPRQQ9UMZ3 2332 aa6.73□□□□□ -1.33
PCDH15-233ENST00000621708 IGHV3-64A0A075B6Q5 118 aa6.73□□□□□ -1.33
PCDH15-233ENST00000621708 ZNF561-AS1K7EIQ3 104 aa6.73□□□□□ -1.33
PCDH15-233ENST00000621708 ESDP10768 282 aa6.73□□□□□ -1.33
PCDH15-233ENST00000621708 EREGO14944 169 aa6.72□□□□□ -1.33
PCDH15-233ENST00000621708 GNRH2O43555 120 aa6.72□□□□□ -1.33
PCDH15-233ENST00000621708 Q8N6K4 173 aa6.72□□□□□ -1.33
PCDH15-233ENST00000621708 ARHGAP21Q5T5U3 1957 aa6.72□□□□□ -1.33
PCDH15-233ENST00000621708 DAZ2Q13117 558 aaKnown RBP6.72□□□□□ -1.33
PCDH15-233ENST00000621708 ATXN8Q156A1 80 aa6.72□□□□□ -1.33
PCDH15-233ENST00000621708 MORN5Q5VZ52 161 aa6.72□□□□□ -1.33
PCDH15-233ENST00000621708 DAZ4Q86SG3 579 aaKnown RBP6.72□□□□□ -1.33
PCDH15-233ENST00000621708 DAZ3Q9NR90 486 aaKnown RBP6.72□□□□□ -1.33
PCDH15-233ENST00000621708 SHANK1Q9Y566 2161 aa6.72□□□□□ -1.33
PCDH15-233ENST00000621708 A0A1B0GWB2 263 aa6.72□□□□□ -1.33
PCDH15-233ENST00000621708 MRPL23Q16540 153 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms