RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 X6R8D5 127 aa5.64□□□□□ -1.51
CLK1-215ENST00000621181 IGLV2-18A0A075B6J9 118 aa5.63□□□□□ -1.51
CLK1-215ENST00000621181 A0A1W2PS18 150 aa5.63□□□□□ -1.51
CLK1-215ENST00000621181 KNCNA6PVL3 124 aa5.63□□□□□ -1.51
CLK1-215ENST00000621181 ZNF705GA8MUZ8 300 aaPredicted RBP5.63□□□□□ -1.51
CLK1-215ENST00000621181 SERF1AO75920 110 aa5.63□□□□□ -1.51
CLK1-215ENST00000621181 SNRPCP09234 159 aaKnown RBP5.63□□□□□ -1.51
CLK1-215ENST00000621181 CRISP2P16562 243 aa5.63□□□□□ -1.51
CLK1-215ENST00000621181 ERVFC1-1P60608 527 aa5.63□□□□□ -1.51
CLK1-215ENST00000621181 SUMO1P63165 101 aaKnown RBP5.63□□□□□ -1.51
CLK1-215ENST00000621181 ERHP84090 104 aaKnown RBP5.63□□□□□ -1.51
CLK1-215ENST00000621181 C12orf74Q32Q52 190 aa5.63□□□□□ -1.51
CLK1-215ENST00000621181 LGALS9BQ3B8N2 356 aa5.63□□□□□ -1.51
CLK1-215ENST00000621181 TEX43Q6ZNM6 134 aa5.63□□□□□ -1.51
CLK1-215ENST00000621181 FAM231DQ6ZW35 169 aa5.63□□□□□ -1.51
CLK1-215ENST00000621181 UBE2DNLQ8IWF7 75 aa5.63□□□□□ -1.51
CLK1-215ENST00000621181 OR8I2Q8N0Y5 310 aa5.63□□□□□ -1.51
CLK1-215ENST00000621181 CMTM2Q8TAZ6 248 aa5.63□□□□□ -1.51
CLK1-215ENST00000621181 FXYD5Q96DB9 178 aa5.63□□□□□ -1.51
CLK1-215ENST00000621181 K7EQG2 157 aa5.62□□□□□ -1.51
CLK1-215ENST00000621181 OR7C2O60412 319 aa5.62□□□□□ -1.51
CLK1-215ENST00000621181 MT-ND6P03923 174 aa5.62□□□□□ -1.51
CLK1-215ENST00000621181 NUTF2P61970 127 aaKnown RBP5.62□□□□□ -1.51
CLK1-215ENST00000621181 TIGITQ495A1 244 aa5.62□□□□□ -1.51
CLK1-215ENST00000621181 COX19Q49B96 90 aa5.62□□□□□ -1.51
CLK1-215ENST00000621181 ZNF575Q86XF7 245 aa5.62□□□□□ -1.51
CLK1-215ENST00000621181 NPIPB3Q92617 1050 aa5.62□□□□□ -1.51
CLK1-215ENST00000621181 GRAMD2BQ96HH9 432 aa5.62□□□□□ -1.51
CLK1-215ENST00000621181 METTL26Q96S19 204 aa5.62□□□□□ -1.51
CLK1-215ENST00000621181 KRTAP4-5Q9BYR2 181 aa5.62□□□□□ -1.51
CLK1-215ENST00000621181 KLF12Q9Y4X4 402 aa5.62□□□□□ -1.51
CLK1-215ENST00000621181 VPS13DQ5THJ4 4388 aa5.62□□□□□ -1.51
CLK1-215ENST00000621181 DNAH10Q8IVF4 4471 aa5.62□□□□□ -1.51
CLK1-215ENST00000621181 SNURFLB1AK76 121 aa5.62□□□□□ -1.51
CLK1-215ENST00000621181 PYYP10082 97 aa5.62□□□□□ -1.51
CLK1-215ENST00000621181 WDR73Q6P4I2 378 aa5.62□□□□□ -1.51
CLK1-215ENST00000621181 CSNK1G2-AS1Q8NCQ2 148 aa5.62□□□□□ -1.51
CLK1-215ENST00000621181 C20orf144Q9BQM9 153 aa5.62□□□□□ -1.51
CLK1-215ENST00000621181 C1QTNF4Q9BXJ3 329 aa5.62□□□□□ -1.51
CLK1-215ENST00000621181 SCGB2A1O75556 95 aa5.61□□□□□ -1.51
CLK1-215ENST00000621181 SCGB1D1O95968 90 aa5.61□□□□□ -1.51
CLK1-215ENST00000621181 GPX1P07203 203 aa5.61□□□□□ -1.51
CLK1-215ENST00000621181 RAB4AP20338 218 aa5.61□□□□□ -1.51
CLK1-215ENST00000621181 PLP1P60201 277 aa5.61□□□□□ -1.51
CLK1-215ENST00000621181 SSTP61278 116 aa5.61□□□□□ -1.51
CLK1-215ENST00000621181 RANP62826 216 aaKnown RBP5.61□□□□□ -1.51
CLK1-215ENST00000621181 UBE2L3P68036 154 aaKnown RBP5.61□□□□□ -1.51
CLK1-215ENST00000621181 TDRG1Q3Y452 100 aa5.61□□□□□ -1.51
CLK1-215ENST00000621181 OR10J3Q5JRS4 329 aa5.61□□□□□ -1.51
CLK1-215ENST00000621181 PSMG4Q5JS54 123 aa5.61□□□□□ -1.51
CLK1-215ENST00000621181 GDF5OSQ5U4N7 250 aa5.61□□□□□ -1.51
CLK1-215ENST00000621181 C10orf113Q5VZT2 155 aa5.61□□□□□ -1.51
CLK1-215ENST00000621181 OR1L4Q8NGR5 311 aa5.61□□□□□ -1.51
CLK1-215ENST00000621181 DCANP1Q8TF63 244 aa5.61□□□□□ -1.51
CLK1-215ENST00000621181 LINC00479Q96M42 142 aa5.61□□□□□ -1.51
CLK1-215ENST00000621181 TRGV9Q99603 122 aa5.61□□□□□ -1.51
CLK1-215ENST00000621181 PAXXQ9BUH6 204 aa5.61□□□□□ -1.51
CLK1-215ENST00000621181 SNHG12Q9BXW3 62 aa5.61□□□□□ -1.51
CLK1-215ENST00000621181 CORTO00230 105 aa5.6□□□□□ -1.51
CLK1-215ENST00000621181 PEX7O00628 323 aa5.6□□□□□ -1.51
CLK1-215ENST00000621181 COX7A2P2O60397 106 aa5.6□□□□□ -1.51
CLK1-215ENST00000621181 SPART-AS1P0CW21 52 aa5.6□□□□□ -1.51
CLK1-215ENST00000621181 EMP1P54849 157 aa5.6□□□□□ -1.51
CLK1-215ENST00000621181 IBA57Q5T440 356 aaKnown RBP5.6□□□□□ -1.51
CLK1-215ENST00000621181 RASL11AQ6T310 242 aa5.6□□□□□ -1.51
CLK1-215ENST00000621181 MLST8Q9BVC4 326 aa5.6□□□□□ -1.51
CLK1-215ENST00000621181 XCL2Q9UBD3 114 aa5.6□□□□□ -1.51
CLK1-215ENST00000621181 A0A1B0GXF2 115 aa5.6□□□□□ -1.51
CLK1-215ENST00000621181 HLA-DQA1P01909 254 aa5.6□□□□□ -1.51
CLK1-215ENST00000621181 SUB1P53999 127 aaKnown RBP eCLIP5.6□□□□□ -1.51
CLK1-215ENST00000621181 SNRPD3P62318 126 aaKnown RBP5.6□□□□□ -1.51
CLK1-215ENST00000621181 TMEM183BQ1AE95 376 aa5.6□□□□□ -1.51
CLK1-215ENST00000621181 C1orf134Q5TEV5 83 aa5.6□□□□□ -1.51
CLK1-215ENST00000621181 Q6ZR54 194 aa5.6□□□□□ -1.51
CLK1-215ENST00000621181 MRPL52Q86TS9 123 aaKnown RBP5.6□□□□□ -1.51
CLK1-215ENST00000621181 NIT1Q86X76 327 aa5.6□□□□□ -1.51
CLK1-215ENST00000621181 NUDT10Q8NFP7 164 aa5.6□□□□□ -1.51
CLK1-215ENST00000621181 NUDT11Q96G61 164 aa5.6□□□□□ -1.51
CLK1-215ENST00000621181 TRAV34A0A0B4J273 112 aa5.59□□□□□ -1.51
CLK1-215ENST00000621181 CTRLP40313 264 aa5.59□□□□□ -1.51
CLK1-215ENST00000621181 TCL1AP56279 114 aa5.59□□□□□ -1.51
CLK1-215ENST00000621181 SLAQ13239 276 aa5.59□□□□□ -1.51
CLK1-215ENST00000621181 BAGE3Q86Y29 109 aa5.59□□□□□ -1.51
CLK1-215ENST00000621181 BAGE2Q86Y30 109 aa5.59□□□□□ -1.51
CLK1-215ENST00000621181 SMIM12Q96EX1 92 aa5.59□□□□□ -1.51
CLK1-215ENST00000621181 NEU1Q99519 415 aa5.59□□□□□ -1.51
CLK1-215ENST00000621181 NAT8BQ9UHF3 227 aa5.59□□□□□ -1.51
CLK1-215ENST00000621181 EPDR1Q9UM22 224 aa5.59□□□□□ -1.51
CLK1-215ENST00000621181 IGHV3OR16-12A0A075B7B8 117 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 TMEM189A5PLL7 270 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 C19orf71A6NCJ1 209 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 C16orf90A8MZG2 172 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 SPINK4O60575 86 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 HTN3P15516 51 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 KIAA1644Q3SXP7 199 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 ETFRF1Q6IPR1 90 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 MRPL54Q6P161 138 aaKnown RBP5.58□□□□□ -1.52
CLK1-215ENST00000621181 C16orf54Q6UWD8 224 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 LINC00305Q7Z4B0 112 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 NHLRC2Q8NBF2 726 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms