RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 C5orf17Q8NAS9 161 aa4.6□□□□□ -1.67
BRCC3-209ENST00000620502 C11orf72Q8NBR9 251 aa4.6□□□□□ -1.67
BRCC3-209ENST00000620502 STOML3Q8TAV4 291 aa4.6□□□□□ -1.67
BRCC3-209ENST00000620502 MBD3L1Q8WWY6 194 aa4.6□□□□□ -1.67
BRCC3-209ENST00000620502 SGK494Q96LW2 274 aa4.6□□□□□ -1.67
BRCC3-209ENST00000620502 NOP10Q9NPE3 64 aaKnown RBP4.6□□□□□ -1.67
BRCC3-209ENST00000620502 TP53TG3Q9ULZ0 132 aa4.6□□□□□ -1.67
BRCC3-209ENST00000620502 TIMM8BQ9Y5J9 83 aaPredicted RBP4.6□□□□□ -1.67
BRCC3-209ENST00000620502 LENEPQ9Y5L5 61 aa4.6□□□□□ -1.67
BRCC3-209ENST00000620502 HYDINQ4G0P3 5121 aa4.6□□□□□ -1.67
BRCC3-209ENST00000620502 IGHV1OR15-1A0A075B7D0 117 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 SERTM2A0A1B0GWG4 89 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 MAP1LC3B2A6NCE7 125 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 CBY3A6NI87 242 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 FAM74A7A6NL05 159 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 UMAD1C9J7I0 102 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 F5H697 171 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 TRIAP1O43715 76 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 PFDN1O60925 122 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 DEFB130BP0DP73 79 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 DEFB130AP0DP74 79 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 TPT1P13693 172 aaKnown RBP4.59□□□□□ -1.67
BRCC3-209ENST00000620502 UBE2G2P60604 165 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 DAD1P61803 113 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 DAZ2Q13117 558 aaKnown RBP4.59□□□□□ -1.67
BRCC3-209ENST00000620502 Q6AWC8 147 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 LGALS9CQ6DKI2 356 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 DPPA3Q6W0C5 159 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 AKAP14Q86UN6 197 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 IQCF2Q8IXL9 164 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 EIF4E3Q8N5X7 224 aaKnown RBP4.59□□□□□ -1.67
BRCC3-209ENST00000620502 DYNC2H1Q8NCM8 4307 aaKnown RBP4.59□□□□□ -1.67
BRCC3-209ENST00000620502 LINC00479Q96M42 142 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 MAP1LC3BQ9GZQ8 125 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 GSN-AS1Q9NRJ2 163 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 TENM2Q9NT68 2774 aa4.59□□□□□ -1.67
BRCC3-209ENST00000620502 SNURFLB1AK76 121 aa4.58□□□□□ -1.68
BRCC3-209ENST00000620502 LY6G6CO95867 125 aa4.58□□□□□ -1.68
BRCC3-209ENST00000620502 ZNF80P51504 273 aaPredicted RBP4.58□□□□□ -1.68
BRCC3-209ENST00000620502 EIF5AP63241 154 aaKnown RBP4.58□□□□□ -1.68
BRCC3-209ENST00000620502 MUC21Q5SSG8 566 aa4.58□□□□□ -1.68
BRCC3-209ENST00000620502 IBA57Q5T440 356 aaKnown RBP4.58□□□□□ -1.68
BRCC3-209ENST00000620502 C9orf62Q8N4C0 152 aa4.58□□□□□ -1.68
BRCC3-209ENST00000620502 CYB561D1Q8N8Q1 229 aa4.58□□□□□ -1.68
BRCC3-209ENST00000620502 TMEM75Q8N9X5 138 aa4.58□□□□□ -1.68
BRCC3-209ENST00000620502 ZNF680Q8NEM1 530 aa4.58□□□□□ -1.68
BRCC3-209ENST00000620502 FAM213BQ8TBF2 198 aa4.58□□□□□ -1.68
BRCC3-209ENST00000620502 SFT2D1Q8WV19 159 aa4.58□□□□□ -1.68
BRCC3-209ENST00000620502 FAM210BQ96KR6 192 aa4.58□□□□□ -1.68
BRCC3-209ENST00000620502 ATG101Q9BSB4 218 aa4.58□□□□□ -1.68
BRCC3-209ENST00000620502 TREM1Q9NP99 234 aa4.58□□□□□ -1.68
BRCC3-209ENST00000620502 MDFICQ9P1T7 246 aa4.58□□□□□ -1.68
BRCC3-209ENST00000620502 PSG8Q9UQ74 426 aa4.58□□□□□ -1.68
BRCC3-209ENST00000620502 KLF12Q9Y4X4 402 aa4.58□□□□□ -1.68
BRCC3-209ENST00000620502 COX11Q9Y6N1 276 aa4.58□□□□□ -1.68
BRCC3-209ENST00000620502 TRAV34A0A0B4J273 112 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 F6UZH7 168 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 K7EQM0 130 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 GNRH2O43555 120 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 SPINK4O60575 86 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 PAGE4O60829 102 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 GAGE7O76087 117 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 ATP5G1P05496 136 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 GAGE12FP0CL80 117 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 GAGE12GP0CL81 117 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 GAGE12IP0CL82 117 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 HTN3P15516 51 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 ATP5G3P48201 142 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 TCL1AP56279 114 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 CCL20P78556 96 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 FLI1Q01543 452 aaPredicted RBP4.57□□□□□ -1.68
BRCC3-209ENST00000620502 TDRG1Q3Y452 100 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 TMEM88Q6PEY1 159 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 Q6ZTI0 123 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 PRNTQ86SH4 94 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 ZNF575Q86XF7 245 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 NTN5Q8WTR8 489 aaPredicted RBP4.57□□□□□ -1.68
BRCC3-209ENST00000620502 C18orf15Q96N68 181 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 NDUFAF3Q9BU61 184 aa4.57□□□□□ -1.68
BRCC3-209ENST00000620502 NKX6-2Q9C056 277 aaPredicted RBP4.57□□□□□ -1.68
BRCC3-209ENST00000620502 PLECQ15149 4684 aaKnown RBP4.56□□□□□ -1.68
BRCC3-209ENST00000620502 TRAV1-1A0A0B4J248 108 aa4.56□□□□□ -1.68
BRCC3-209ENST00000620502 TRAV21A0A0B4J279 112 aa4.56□□□□□ -1.68
BRCC3-209ENST00000620502 A0A1B0GV50 99 aa4.56□□□□□ -1.68
BRCC3-209ENST00000620502 FBLL1A6NHQ2 334 aaKnown RBP4.56□□□□□ -1.68
BRCC3-209ENST00000620502 F5H768 121 aa4.56□□□□□ -1.68
BRCC3-209ENST00000620502 PEX7O00628 323 aa4.56□□□□□ -1.68
BRCC3-209ENST00000620502 IFNA7P01567 189 aa4.56□□□□□ -1.68
BRCC3-209ENST00000620502 SULT1A2P50226 295 aa4.56□□□□□ -1.68
BRCC3-209ENST00000620502 RAB5CP51148 216 aa4.56□□□□□ -1.68
BRCC3-209ENST00000620502 SAPCD1Q5SSQ6 148 aa4.56□□□□□ -1.68
BRCC3-209ENST00000620502 FAM159AQ6UWV7 190 aa4.56□□□□□ -1.68
BRCC3-209ENST00000620502 SLC51BQ86UW2 128 aa4.56□□□□□ -1.68
BRCC3-209ENST00000620502 HIST1H2BAQ96A08 127 aa4.56□□□□□ -1.68
BRCC3-209ENST00000620502 LYSTQ99698 3801 aa4.56□□□□□ -1.68
BRCC3-209ENST00000620502 NDFIP1Q9BT67 221 aa4.56□□□□□ -1.68
BRCC3-209ENST00000620502 ARL2-SNX15V9GYD0 113 aa4.56□□□□□ -1.68
BRCC3-209ENST00000620502 SACSQ9NZJ4 4579 aa4.56□□□□□ -1.68
BRCC3-209ENST00000620502 TRGV1A0A0A0MS02 117 aa4.55□□□□□ -1.68
BRCC3-209ENST00000620502 IGHV3-16A0A0C4DH30 117 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms