RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 LINC00477Q96M19 166 aa9.53□□□□□ -0.88
TNFAIP3-209ENST00000619035 K7EQG2 157 aa9.53□□□□□ -0.88
TNFAIP3-209ENST00000619035 PROK1P58294 105 aa9.53□□□□□ -0.88
TNFAIP3-209ENST00000619035 RIGQ13278 110 aa9.53□□□□□ -0.88
TNFAIP3-209ENST00000619035 DNLZQ5SXM8 178 aa9.53□□□□□ -0.88
TNFAIP3-209ENST00000619035 C11orf21Q9P2W6 132 aa9.53□□□□□ -0.88
TNFAIP3-209ENST00000619035 LENEPQ9Y5L5 61 aa9.53□□□□□ -0.88
TNFAIP3-209ENST00000619035 SETXQ7Z333 2677 aaKnown RBP9.52□□□□□ -0.88
TNFAIP3-209ENST00000619035 FHL3Q13643 280 aa9.52□□□□□ -0.89
TNFAIP3-209ENST00000619035 PRR9Q5T870 116 aa9.52□□□□□ -0.89
TNFAIP3-209ENST00000619035 HSBP1O75506 76 aa9.52□□□□□ -0.89
TNFAIP3-209ENST00000619035 CSN3P07498 182 aa9.52□□□□□ -0.89
TNFAIP3-209ENST00000619035 PKIAP61925 76 aa9.52□□□□□ -0.89
TNFAIP3-209ENST00000619035 NSUN5P1Q3KNT7 163 aa9.52□□□□□ -0.89
TNFAIP3-209ENST00000619035 MSRB1Q9NZV6 116 aa9.52□□□□□ -0.89
TNFAIP3-209ENST00000619035 FN1P02751 2386 aaKnown RBP9.51□□□□□ -0.89
TNFAIP3-209ENST00000619035 IGKV3-20P01619 116 aa9.51□□□□□ -0.89
TNFAIP3-209ENST00000619035 FER1L6-AS1Q8NA97 138 aa9.51□□□□□ -0.89
TNFAIP3-209ENST00000619035 BORCS7Q96B45 105 aa9.51□□□□□ -0.89
TNFAIP3-209ENST00000619035 TRAV2A0A0B4J234 112 aa9.51□□□□□ -0.89
TNFAIP3-209ENST00000619035 TRBV7-9A0A0J9YWB2 115 aa9.51□□□□□ -0.89
TNFAIP3-209ENST00000619035 Q6AWC8 147 aa9.51□□□□□ -0.89
TNFAIP3-209ENST00000619035 AMN1Q8IY45 258 aa9.51□□□□□ -0.89
TNFAIP3-209ENST00000619035 TMEM61Q8N0U2 210 aa9.51□□□□□ -0.89
TNFAIP3-209ENST00000619035 IGKV3D-20A0A0C4DH25 116 aa9.5□□□□□ -0.89
TNFAIP3-209ENST00000619035 TSTD3H0UI37 97 aa9.5□□□□□ -0.89
TNFAIP3-209ENST00000619035 M0R2Z0 102 aa9.5□□□□□ -0.89
TNFAIP3-209ENST00000619035 RPS20P60866 119 aaKnown RBP9.5□□□□□ -0.89
TNFAIP3-209ENST00000619035 TWIST1Q15672 202 aa9.5□□□□□ -0.89
TNFAIP3-209ENST00000619035 ZFAND2AQ8N6M9 145 aa9.5□□□□□ -0.89
TNFAIP3-209ENST00000619035 Q8N976 141 aa9.5□□□□□ -0.89
TNFAIP3-209ENST00000619035 C3orf79P0CE67 100 aa9.49□□□□□ -0.89
TNFAIP3-209ENST00000619035 RNASE4P34096 147 aaKnown RBP9.49□□□□□ -0.89
TNFAIP3-209ENST00000619035 KIR3DS1Q14943 382 aa9.49□□□□□ -0.89
TNFAIP3-209ENST00000619035 LINC01559Q495D7 138 aa9.49□□□□□ -0.89
TNFAIP3-209ENST00000619035 SIGLEC8Q9NYZ4 499 aa9.49□□□□□ -0.89
TNFAIP3-209ENST00000619035 IGLC6P0CF74 106 aa9.49□□□□□ -0.89
TNFAIP3-209ENST00000619035 DDTP30046 118 aa9.49□□□□□ -0.89
TNFAIP3-209ENST00000619035 EBLN2Q6P2I7 272 aa9.49□□□□□ -0.89
TNFAIP3-209ENST00000619035 SMKR1H3BMG3 65 aa9.48□□□□□ -0.89
TNFAIP3-209ENST00000619035 CD300EQ496F6 205 aaPredicted RBP9.48□□□□□ -0.89
TNFAIP3-209ENST00000619035 TIMM8BQ9Y5J9 83 aaPredicted RBP9.48□□□□□ -0.89
TNFAIP3-209ENST00000619035 WNK1Q9H4A3 2382 aa9.48□□□□□ -0.89
TNFAIP3-209ENST00000619035 A0A0J9YX75 114 aa9.48□□□□□ -0.89
TNFAIP3-209ENST00000619035 D6R8Y8 96 aa9.48□□□□□ -0.89
TNFAIP3-209ENST00000619035 SPRY2O43597 315 aa9.48□□□□□ -0.89
TNFAIP3-209ENST00000619035 CTRLP40313 264 aa9.48□□□□□ -0.89
TNFAIP3-209ENST00000619035 DEFB114Q30KQ6 69 aa9.48□□□□□ -0.89
TNFAIP3-209ENST00000619035 LINC00173Q6ZV60 143 aa9.48□□□□□ -0.89
TNFAIP3-209ENST00000619035 FAM19A4Q96LR4 140 aa9.48□□□□□ -0.89
TNFAIP3-209ENST00000619035 IGHV1-24A0A0C4DH33 117 aa9.47□□□□□ -0.89
TNFAIP3-209ENST00000619035 LOC389332A0A1B0GUA5 103 aa9.47□□□□□ -0.89
TNFAIP3-209ENST00000619035 KRTAP10-3P60369 221 aa9.47□□□□□ -0.89
TNFAIP3-209ENST00000619035 ATOH7Q8N100 152 aa9.47□□□□□ -0.89
TNFAIP3-209ENST00000619035 GATD1Q8NB37 220 aa9.47□□□□□ -0.89
TNFAIP3-209ENST00000619035 PAM16Q9Y3D7 125 aa9.47□□□□□ -0.89
TNFAIP3-209ENST00000619035 TRAV25A0A0B4J276 109 aa9.47□□□□□ -0.89
TNFAIP3-209ENST00000619035 TRAV21A0A0B4J279 112 aa9.47□□□□□ -0.89
TNFAIP3-209ENST00000619035 NCR2O95944 276 aa9.47□□□□□ -0.89
TNFAIP3-209ENST00000619035 LINC00614P0C842 121 aa9.47□□□□□ -0.89
TNFAIP3-209ENST00000619035 DEFB131AP59861 70 aa9.47□□□□□ -0.89
TNFAIP3-209ENST00000619035 ZNF493Q6ZR52 646 aa9.47□□□□□ -0.89
TNFAIP3-209ENST00000619035 NDUFA11Q86Y39 141 aa9.47□□□□□ -0.89
TNFAIP3-209ENST00000619035 A0A1B0GW15 77 aa9.46□□□□□ -0.9
TNFAIP3-209ENST00000619035 ADARB2-AS1A8MUL3 147 aa9.46□□□□□ -0.9
TNFAIP3-209ENST00000619035 GAS8-AS1O95177 125 aa9.46□□□□□ -0.9
TNFAIP3-209ENST00000619035 MRPL51Q4U2R6 128 aaKnown RBP9.46□□□□□ -0.9
TNFAIP3-209ENST00000619035 FAM104BQ5XKR9 115 aa9.46□□□□□ -0.9
TNFAIP3-209ENST00000619035 C14orf144Q96I85 54 aa9.46□□□□□ -0.9
TNFAIP3-209ENST00000619035 KNCNA6PVL3 124 aa9.45□□□□□ -0.9
TNFAIP3-209ENST00000619035 DEFA6Q01524 100 aa9.45□□□□□ -0.9
TNFAIP3-209ENST00000619035 ZNF124Q15973 351 aa9.45□□□□□ -0.9
TNFAIP3-209ENST00000619035 TEX43Q6ZNM6 134 aa9.45□□□□□ -0.9
TNFAIP3-209ENST00000619035 SPATA12Q7Z6I5 190 aa9.45□□□□□ -0.9
TNFAIP3-209ENST00000619035 OR10AG1Q8NH19 301 aa9.45□□□□□ -0.9
TNFAIP3-209ENST00000619035 SAP30O75446 220 aa9.45□□□□□ -0.9
TNFAIP3-209ENST00000619035 FOXI2Q6ZQN5 318 aa9.45□□□□□ -0.9
TNFAIP3-209ENST00000619035 ODF3Q96PU9 254 aa9.45□□□□□ -0.9
TNFAIP3-209ENST00000619035 SORL1Q92673 2214 aa9.45□□□□□ -0.9
TNFAIP3-209ENST00000619035 C2CD3Q4AC94 2353 aa9.45□□□□□ -0.9
TNFAIP3-209ENST00000619035 F8P00451 2351 aa9.44□□□□□ -0.9
TNFAIP3-209ENST00000619035 TRAV12-2A0A075B6T6 113 aa9.44□□□□□ -0.9
TNFAIP3-209ENST00000619035 TRAV12-3A0A0B4J271 114 aa9.44□□□□□ -0.9
TNFAIP3-209ENST00000619035 OR4C46A6NHA9 309 aa9.44□□□□□ -0.9
TNFAIP3-209ENST00000619035 KLLNB2CW77 178 aa9.44□□□□□ -0.9
TNFAIP3-209ENST00000619035 H3BVH4 76 aa9.44□□□□□ -0.9
TNFAIP3-209ENST00000619035 IFI27P40305 119 aaPredicted RBP9.44□□□□□ -0.9
TNFAIP3-209ENST00000619035 LEPP41159 167 aa9.44□□□□□ -0.9
TNFAIP3-209ENST00000619035 FXYD7P58549 80 aa9.44□□□□□ -0.9
TNFAIP3-209ENST00000619035 CTAG1AP78358 180 aa9.44□□□□□ -0.9
TNFAIP3-209ENST00000619035 SPINK13Q1W4C9 94 aa9.44□□□□□ -0.9
TNFAIP3-209ENST00000619035 MAJINQ3KP22 176 aa9.44□□□□□ -0.9
TNFAIP3-209ENST00000619035 ANXA2RQ3ZCQ2 193 aa9.44□□□□□ -0.9
TNFAIP3-209ENST00000619035 APRG1Q8IVJ8 170 aa9.44□□□□□ -0.9
TNFAIP3-209ENST00000619035 SPAG8Q99932 426 aaPredicted RBP9.44□□□□□ -0.9
TNFAIP3-209ENST00000619035 DUSP14O95147 198 aaKnown RBP9.43□□□□□ -0.9
TNFAIP3-209ENST00000619035 CHCHD1Q96BP2 118 aaKnown RBP9.43□□□□□ -0.9
TNFAIP3-209ENST00000619035 RNF185Q96GF1 192 aa9.43□□□□□ -0.9
TNFAIP3-209ENST00000619035 PRELID3AQ96N28 172 aa9.43□□□□□ -0.9
TNFAIP3-209ENST00000619035 MCRIP2Q9BUT9 160 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms