RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 SPAG8Q99932 426 aaPredicted RBP3.94□□□□□ -1.78
SHMT1-211ENST00000618902 ALKBH7Q9BT30 221 aaPredicted RBP3.94□□□□□ -1.78
SHMT1-211ENST00000618902 RPP21Q9H633 154 aaKnown RBP3.94□□□□□ -1.78
SHMT1-211ENST00000618902 CLEC5AQ9NY25 188 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 HSPB8Q9UJY1 196 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 TP53TG3Q9ULZ0 132 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 HIGD1AQ9Y241 93 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 IGHV3OR16-13A0A075B7E8 117 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 IGHV3-74A0A0B4J1X5 117 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 A0A1B0GXF2 115 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 C19orf71A6NCJ1 209 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 PGPEP1LA6NFU8 196 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 ZNF785A8K8V0 405 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 HIGD1CA8MV81 97 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 HSBP1L1C9JCN9 74 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 C3orf84H3BNL1 204 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 GNG7O60262 68 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 NUPR1O60356 82 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 TCRAP04437 139 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 RD3LP0DJH9 198 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 GATA2P23769 480 aaPredicted RBP3.93□□□□□ -1.78
SHMT1-211ENST00000618902 SRIP30626 198 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 CTRLP40313 264 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 CSN1S1P47710 185 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 RPS20P60866 119 aaKnown RBP3.93□□□□□ -1.78
SHMT1-211ENST00000618902 PLECQ15149 4684 aaKnown RBP3.93□□□□□ -1.78
SHMT1-211ENST00000618902 DEFB114Q30KQ6 69 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 CD300EQ496F6 205 aaPredicted RBP3.93□□□□□ -1.78
SHMT1-211ENST00000618902 CDPF1Q6NVV7 123 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 TMEM75Q8N9X5 138 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 C18orf32Q8TCD1 76 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 DYNLRB2Q8TF09 96 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 ORAOV1Q8WV07 137 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 TMEM70Q9BUB7 260 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 SNHG12Q9BXW3 62 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 TMEM191AQ9H0A3 160 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 RNASE7Q9H1E1 156 aaKnown RBP3.93□□□□□ -1.78
SHMT1-211ENST00000618902 ST20Q9HBF5 79 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 C19orf73Q9NVV2 129 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 U3KQE9 123 aa3.93□□□□□ -1.78
SHMT1-211ENST00000618902 DYNC2H1Q8NCM8 4307 aaKnown RBP3.92□□□□□ -1.78
SHMT1-211ENST00000618902 AGRNO00468 2067 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 IGHV3-66A0A0C4DH42 116 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 IGHV7-4-1A0A0J9YVY3 117 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 GRIFINA4D1Z8 144 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 OR4C46A6NHA9 309 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 M0R2Z0 102 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 CHEK1O14757 476 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 DLEU1O43261 78 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 IGLC2P0DOY2 106 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 IGLC3P0DOY3 106 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 PSG1P11464 419 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 ORM2P19652 201 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 KRTDAPP60985 99 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 SPATA45Q537H7 98 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 C16orf54Q6UWD8 224 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 NIT1Q86X76 327 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 TMEM61Q8N0U2 210 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 Q8N1Y9 231 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 OR1B1Q8NGR6 318 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 KIR2DL5BQ8NHK3 375 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 C17orf77Q96MU5 243 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 SPATA25Q9BR10 227 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 TM2D3Q9BRN9 247 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 SHANK2-AS3Q9BTD1 123 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 MAP1LC3CQ9BXW4 147 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 SLC25A39Q9BZJ4 359 aaPredicted RBP3.92□□□□□ -1.78
SHMT1-211ENST00000618902 AAMDCQ9H7C9 122 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 SMPXQ9UHP9 88 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 TP53TG1Q9Y2A0 90 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 GOLT1BQ9Y3E0 138 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 CBY1Q9Y3M2 126 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 U3KQK5 164 aa3.92□□□□□ -1.78
SHMT1-211ENST00000618902 SACSQ9NZJ4 4579 aa3.91□□□□□ -1.78
SHMT1-211ENST00000618902 TRBV19A0A075B6N1 114 aa3.91□□□□□ -1.78
SHMT1-211ENST00000618902 TRAV5A0A0B4J249 113 aa3.91□□□□□ -1.78
SHMT1-211ENST00000618902 A0A1B0GUT8 65 aa3.91□□□□□ -1.78
SHMT1-211ENST00000618902 LEPROTL1O95214 131 aa3.91□□□□□ -1.78
SHMT1-211ENST00000618902 PPBPP02775 128 aa3.91□□□□□ -1.78
SHMT1-211ENST00000618902 C3orf79P0CE67 100 aa3.91□□□□□ -1.78
SHMT1-211ENST00000618902 CT45A10P0DMU9 189 aa3.91□□□□□ -1.78
SHMT1-211ENST00000618902 IGHV4-30-4P0DP06 118 aa3.91□□□□□ -1.78
SHMT1-211ENST00000618902 RPL7P18124 248 aaKnown RBP3.91□□□□□ -1.78
SHMT1-211ENST00000618902 HNRNPA3P51991 378 aaKnown RBP3.91□□□□□ -1.78
SHMT1-211ENST00000618902 LINC00310P59036 64 aa3.91□□□□□ -1.78
SHMT1-211ENST00000618902 MRPL54Q6P161 138 aaKnown RBP3.91□□□□□ -1.78
SHMT1-211ENST00000618902 ZNF493Q6ZR52 646 aa3.91□□□□□ -1.78
SHMT1-211ENST00000618902 ZNF738Q8NE65 137 aa3.91□□□□□ -1.78
SHMT1-211ENST00000618902 OR10AG1Q8NH19 301 aa3.91□□□□□ -1.78
SHMT1-211ENST00000618902 SVIPQ8NHG7 77 aa3.91□□□□□ -1.78
SHMT1-211ENST00000618902 RHPN1-AS1Q9BWJ2 59 aa3.91□□□□□ -1.78
SHMT1-211ENST00000618902 WFDC10AQ9H1F0 79 aa3.91□□□□□ -1.78
SHMT1-211ENST00000618902 Q9H3A6 140 aa3.91□□□□□ -1.78
SHMT1-211ENST00000618902 LAMTOR2Q9Y2Q5 125 aa3.91□□□□□ -1.78
SHMT1-211ENST00000618902 DNAH1Q9P2D7 4330 aa3.91□□□□□ -1.78
SHMT1-211ENST00000618902 STARD9Q9P2P6 4700 aa3.9□□□□□ -1.78
SHMT1-211ENST00000618902 LOC102724200A0A096LPH7 203 aaPredicted RBP3.9□□□□□ -1.79
SHMT1-211ENST00000618902 RBAKDNA6NC62 111 aa3.9□□□□□ -1.79
SHMT1-211ENST00000618902 F2Z2F3 143 aa3.9□□□□□ -1.79
SHMT1-211ENST00000618902 SIVA1O15304 175 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms