RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 COLQQ9Y215 455 aaPredicted RBP12.06□□□□□ -0.48
COL5A1-208ENST00000618395 COL11A2P13942 1736 aaPredicted RBP12.06□□□□□ -0.48
COL5A1-208ENST00000618395 SHANK3Q9BYB0 1731 aa12.06□□□□□ -0.48
COL5A1-208ENST00000618395 IGHV4-28A0A0C4DH34 117 aa12.06□□□□□ -0.48
COL5A1-208ENST00000618395 PDE6GP18545 87 aa12.06□□□□□ -0.48
COL5A1-208ENST00000618395 PMAIP1Q13794 54 aa12.06□□□□□ -0.48
COL5A1-208ENST00000618395 TMEM14BQ9NUH8 114 aa12.06□□□□□ -0.48
COL5A1-208ENST00000618395 C17orf100A8MU93 164 aa12.06□□□□□ -0.48
COL5A1-208ENST00000618395 C10orf55Q5SWW7 151 aa12.06□□□□□ -0.48
COL5A1-208ENST00000618395 C11orf52Q96A22 123 aa12.06□□□□□ -0.48
COL5A1-208ENST00000618395 IMUPQ9GZP8 106 aa12.06□□□□□ -0.48
COL5A1-208ENST00000618395 LINC00473A8K010 186 aa12.06□□□□□ -0.48
COL5A1-208ENST00000618395 DKK1O94907 266 aa12.05□□□□□ -0.48
COL5A1-208ENST00000618395 CELA3BP08861 270 aa12.05□□□□□ -0.48
COL5A1-208ENST00000618395 LYPD6Q86Y78 171 aa12.05□□□□□ -0.48
COL5A1-208ENST00000618395 BSPH1Q075Z2 132 aa12.05□□□□□ -0.48
COL5A1-208ENST00000618395 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.05□□□□□ -0.48
COL5A1-208ENST00000618395 K7EN84 100 aa12.05□□□□□ -0.48
COL5A1-208ENST00000618395 NUP210LQ5VU65 1888 aa12.05□□□□□ -0.48
COL5A1-208ENST00000618395 TRAV4A0A0B4J268 109 aa12.05□□□□□ -0.48
COL5A1-208ENST00000618395 Q6ZRM9 215 aa12.05□□□□□ -0.48
COL5A1-208ENST00000618395 RNF5Q99942 180 aa12.05□□□□□ -0.48
COL5A1-208ENST00000618395 NDUFB8O95169 186 aa12.04□□□□□ -0.48
COL5A1-208ENST00000618395 IGKV1-12A0A0C4DH73 117 aa12.04□□□□□ -0.48
COL5A1-208ENST00000618395 IGKV1D-12P01611 117 aa12.04□□□□□ -0.48
COL5A1-208ENST00000618395 A0A0G2JRQ6 117 aa12.04□□□□□ -0.48
COL5A1-208ENST00000618395 FOXE3Q13461 319 aa12.04□□□□□ -0.48
COL5A1-208ENST00000618395 ZNF837Q96EG3 531 aaPredicted RBP12.04□□□□□ -0.48
COL5A1-208ENST00000618395 PRR25Q96S07 402 aa12.04□□□□□ -0.48
COL5A1-208ENST00000618395 SMIM9A6NGZ8 99 aa12.03□□□□□ -0.48
COL5A1-208ENST00000618395 ATP5EP2Q5VTU8 51 aa12.03□□□□□ -0.48
COL5A1-208ENST00000618395 A0A1W2PRX2 142 aa12.03□□□□□ -0.48
COL5A1-208ENST00000618395 SDIM1Q6ZPB5 146 aa12.03□□□□□ -0.48
COL5A1-208ENST00000618395 USMG5Q96IX5 58 aa12.03□□□□□ -0.48
COL5A1-208ENST00000618395 IL15RAQ13261 267 aa12.03□□□□□ -0.48
COL5A1-208ENST00000618395 C16orf54Q6UWD8 224 aa12.03□□□□□ -0.48
COL5A1-208ENST00000618395 IGKV1-27A0A075B6S5 117 aa12.03□□□□□ -0.48
COL5A1-208ENST00000618395 TEX49A0A1B0GTD5 131 aa12.03□□□□□ -0.48
COL5A1-208ENST00000618395 MLST8Q9BVC4 326 aa12.03□□□□□ -0.48
COL5A1-208ENST00000618395 FAM223BA6NKX1 122 aa12.02□□□□□ -0.48
COL5A1-208ENST00000618395 FAM223AQ8IWN6 122 aa12.02□□□□□ -0.48
COL5A1-208ENST00000618395 TCL1BO95988 128 aa12.02□□□□□ -0.48
COL5A1-208ENST00000618395 SLC25A45Q8N413 288 aa12.02□□□□□ -0.48
COL5A1-208ENST00000618395 LINC00694P0DN24 101 aa12.02□□□□□ -0.49
COL5A1-208ENST00000618395 EIF4EBP2Q13542 120 aaPredicted RBP12.02□□□□□ -0.49
COL5A1-208ENST00000618395 SPATA12Q7Z6I5 190 aa12.02□□□□□ -0.49
COL5A1-208ENST00000618395 PRSS22Q9GZN4 317 aa12.02□□□□□ -0.49
COL5A1-208ENST00000618395 IGFL4Q6B9Z1 124 aa12.02□□□□□ -0.49
COL5A1-208ENST00000618395 SND1-IT1Q9HBX3 110 aa12.02□□□□□ -0.49
COL5A1-208ENST00000618395 SIGLEC9Q9Y336 463 aa12.02□□□□□ -0.49
COL5A1-208ENST00000618395 MDS2Q8NDY4 140 aa12.02□□□□□ -0.49
COL5A1-208ENST00000618395 TMEM14CQ9P0S9 112 aa12.01□□□□□ -0.49
COL5A1-208ENST00000618395 CLEC2BQ92478 149 aa12.01□□□□□ -0.49
COL5A1-208ENST00000618395 IGHV1-69DA0A0B4J2H0 117 aa12.01□□□□□ -0.49
COL5A1-208ENST00000618395 NRXN2Q9P2S2 1712 aa12.01□□□□□ -0.49
COL5A1-208ENST00000618395 SERP2Q8N6R1 65 aa12.01□□□□□ -0.49
COL5A1-208ENST00000618395 Q8N1Y9 231 aa12.01□□□□□ -0.49
COL5A1-208ENST00000618395 IGHV1-3A0A0C4DH29 117 aa12.01□□□□□ -0.49
COL5A1-208ENST00000618395 MSRB2Q9Y3D2 182 aa12.01□□□□□ -0.49
COL5A1-208ENST00000618395 PLXNA4Q9HCM2 1894 aa12□□□□□ -0.49
COL5A1-208ENST00000618395 SPAARA0A1B0GVQ0 90 aa12□□□□□ -0.49
COL5A1-208ENST00000618395 LTAP01374 205 aa12□□□□□ -0.49
COL5A1-208ENST00000618395 IGHV1-2P23083 117 aa12□□□□□ -0.49
COL5A1-208ENST00000618395 SLC22A18ASQ8N1D0 253 aa12□□□□□ -0.49
COL5A1-208ENST00000618395 DSCAMO60469 2012 aa12□□□□□ -0.49
COL5A1-208ENST00000618395 UBE2AP49459 152 aa12□□□□□ -0.49
COL5A1-208ENST00000618395 ETV2O00321 342 aaPredicted RBP12□□□□□ -0.49
COL5A1-208ENST00000618395 CCDC179H3BU77 68 aa11.99□□□□□ -0.49
COL5A1-208ENST00000618395 STPG1Q5TH74 334 aa11.99□□□□□ -0.49
COL5A1-208ENST00000618395 NUPR1O60356 82 aa11.99□□□□□ -0.49
COL5A1-208ENST00000618395 PCOLCEQ15113 449 aa11.99□□□□□ -0.49
COL5A1-208ENST00000618395 PIFOQ8TCI5 191 aa11.99□□□□□ -0.49
COL5A1-208ENST00000618395 PAX9P55771 341 aa11.99□□□□□ -0.49
COL5A1-208ENST00000618395 FAM168AQ92567 244 aa11.99□□□□□ -0.49
COL5A1-208ENST00000618395 RNASE13Q5GAN3 156 aaKnown RBP11.98□□□□□ -0.49
COL5A1-208ENST00000618395 WI2-2373I1.2A0A1W2PRP0 233 aa11.98□□□□□ -0.49
COL5A1-208ENST00000618395 DAZ1Q9NQZ3 744 aaKnown RBP11.98□□□□□ -0.49
COL5A1-208ENST00000618395 NDUFA11Q86Y39 141 aa11.98□□□□□ -0.49
COL5A1-208ENST00000618395 HRCT1Q6UXD1 115 aa11.98□□□□□ -0.49
COL5A1-208ENST00000618395 FAM110AQ9BQ89 295 aa11.98□□□□□ -0.49
COL5A1-208ENST00000618395 UBE2DNLQ8IWF7 75 aa11.98□□□□□ -0.49
COL5A1-208ENST00000618395 C7orf69Q9H7B7 122 aa11.98□□□□□ -0.49
COL5A1-208ENST00000618395 SRRM5B3KS81 715 aa11.98□□□□□ -0.49
COL5A1-208ENST00000618395 TMEM200BQ69YZ2 307 aa11.97□□□□□ -0.49
COL5A1-208ENST00000618395 SMIM26A0A096LP01 95 aa11.97□□□□□ -0.49
COL5A1-208ENST00000618395 KLHL30-AS1Q8NEE0 82 aa11.97□□□□□ -0.49
COL5A1-208ENST00000618395 E9PLD3 99 aa11.97□□□□□ -0.49
COL5A1-208ENST00000618395 Q6P435 159 aa11.97□□□□□ -0.49
COL5A1-208ENST00000618395 TFF1P04155 84 aa11.97□□□□□ -0.49
COL5A1-208ENST00000618395 IGHV1-8P0DP01 117 aa11.97□□□□□ -0.49
COL5A1-208ENST00000618395 FAM120AOSQ5T036 256 aa11.97□□□□□ -0.49
COL5A1-208ENST00000618395 PSPNO60542 156 aa11.97□□□□□ -0.49
COL5A1-208ENST00000618395 COX7CP15954 63 aa11.97□□□□□ -0.49
COL5A1-208ENST00000618395 MRPS36P82909 103 aaKnown RBP11.96□□□□□ -0.49
COL5A1-208ENST00000618395 LOXL1Q08397 574 aaPredicted RBP11.96□□□□□ -0.49
COL5A1-208ENST00000618395 RFPL3SP0C7P2 107 aa11.96□□□□□ -0.49
COL5A1-208ENST00000618395 FXYD5Q96DB9 178 aa11.96□□□□□ -0.49
COL5A1-208ENST00000618395 ATG2AQ2TAZ0 1938 aa11.96□□□□□ -0.49
COL5A1-208ENST00000618395 IGHV3-16A0A0C4DH30 117 aa11.96□□□□□ -0.49
COL5A1-208ENST00000618395 ITGBL1O95965 494 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms