RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 PEMTQ9UBM1 199 aa12.15□□□□□ -0.46
PTPRT-210ENST00000617474 TRGV4A0A0C4DH28 118 aa12.15□□□□□ -0.46
PTPRT-210ENST00000617474 PF4P02776 101 aa12.15□□□□□ -0.46
PTPRT-210ENST00000617474 YAE1D1Q9NRH1 226 aa12.15□□□□□ -0.46
PTPRT-210ENST00000617474 P0C879 139 aa12.15□□□□□ -0.46
PTPRT-210ENST00000617474 KIAA1549Q9HCM3 1950 aa12.15□□□□□ -0.47
PTPRT-210ENST00000617474 SH2D6Q7Z4S9 175 aa12.14□□□□□ -0.47
PTPRT-210ENST00000617474 HLA-DRB4P13762 266 aa12.14□□□□□ -0.47
PTPRT-210ENST00000617474 PLA2G2CQ5R387 149 aa12.14□□□□□ -0.47
PTPRT-210ENST00000617474 HLA-DRB4X5D2U9 266 aa12.14□□□□□ -0.47
PTPRT-210ENST00000617474 K7EIM0 57 aa12.14□□□□□ -0.47
PTPRT-210ENST00000617474 CEND1Q8N111 149 aa12.14□□□□□ -0.47
PTPRT-210ENST00000617474 CFHR4Q92496 578 aa12.14□□□□□ -0.47
PTPRT-210ENST00000617474 NAV2Q8IVL1 2488 aa12.14□□□□□ -0.47
PTPRT-210ENST00000617474 TEX48A0A1B0GUV7 120 aa12.14□□□□□ -0.47
PTPRT-210ENST00000617474 UBE2E1P51965 193 aa12.14□□□□□ -0.47
PTPRT-210ENST00000617474 IGFL3Q6UXB1 125 aa12.14□□□□□ -0.47
PTPRT-210ENST00000617474 KAAG1Q9UBP8 84 aa12.14□□□□□ -0.47
PTPRT-210ENST00000617474 NCKAP5O14513 1909 aa12.13□□□□□ -0.47
PTPRT-210ENST00000617474 IGHV3-16A0A0C4DH30 117 aa12.13□□□□□ -0.47
PTPRT-210ENST00000617474 ADARB2-AS1A8MUL3 147 aa12.13□□□□□ -0.47
PTPRT-210ENST00000617474 GNLYP22749 145 aa12.13□□□□□ -0.47
PTPRT-210ENST00000617474 DEFB131AP59861 70 aa12.13□□□□□ -0.47
PTPRT-210ENST00000617474 TRBV25-1A0A075B6N4 114 aa12.13□□□□□ -0.47
PTPRT-210ENST00000617474 MSRB2Q9Y3D2 182 aa12.13□□□□□ -0.47
PTPRT-210ENST00000617474 USMG5Q96IX5 58 aa12.13□□□□□ -0.47
PTPRT-210ENST00000617474 GAGE12HA6NDE8 117 aa12.12□□□□□ -0.47
PTPRT-210ENST00000617474 AZU1P20160 251 aa12.12□□□□□ -0.47
PTPRT-210ENST00000617474 CDKN1BP46527 198 aa12.12□□□□□ -0.47
PTPRT-210ENST00000617474 LINC01545Q5VT33 79 aa12.12□□□□□ -0.47
PTPRT-210ENST00000617474 PIEZO1Q92508 2521 aa12.12□□□□□ -0.47
PTPRT-210ENST00000617474 PMVKQ15126 192 aa12.12□□□□□ -0.47
PTPRT-210ENST00000617474 C12orf74Q32Q52 190 aa12.12□□□□□ -0.47
PTPRT-210ENST00000617474 TAX1BP3O14907 124 aa12.12□□□□□ -0.47
PTPRT-210ENST00000617474 LINC00322Q6ZN03 302 aaPredicted RBP12.12□□□□□ -0.47
PTPRT-210ENST00000617474 GNRH2O43555 120 aa12.12□□□□□ -0.47
PTPRT-210ENST00000617474 TCF15Q12870 199 aa12.12□□□□□ -0.47
PTPRT-210ENST00000617474 RNASE13Q5GAN3 156 aaKnown RBP12.12□□□□□ -0.47
PTPRT-210ENST00000617474 GATD1Q8NB37 220 aa12.12□□□□□ -0.47
PTPRT-210ENST00000617474 LY6G5BQ8NDX9 201 aa12.12□□□□□ -0.47
PTPRT-210ENST00000617474 FAM223BA6NKX1 122 aa12.11□□□□□ -0.47
PTPRT-210ENST00000617474 I3L2K1 104 aa12.11□□□□□ -0.47
PTPRT-210ENST00000617474 MORN3Q6PF18 240 aaPredicted RBP12.11□□□□□ -0.47
PTPRT-210ENST00000617474 PRIMA1Q86XR5 153 aa12.11□□□□□ -0.47
PTPRT-210ENST00000617474 FAM223AQ8IWN6 122 aa12.11□□□□□ -0.47
PTPRT-210ENST00000617474 C1orf229Q6ZS94 237 aaPredicted RBP12.11□□□□□ -0.47
PTPRT-210ENST00000617474 SEM1Q6ZVN7 128 aa12.11□□□□□ -0.47
PTPRT-210ENST00000617474 SCRT2Q9NQ03 307 aa12.11□□□□□ -0.47
PTPRT-210ENST00000617474 PAX4O43316 350 aa12.1□□□□□ -0.47
PTPRT-210ENST00000617474 IGHV3-38A0A0C4DH36 116 aa12.1□□□□□ -0.47
PTPRT-210ENST00000617474 PRSS29PA6NIE9 313 aa12.1□□□□□ -0.47
PTPRT-210ENST00000617474 F8W1H4 67 aa12.1□□□□□ -0.47
PTPRT-210ENST00000617474 FGF6P10767 208 aa12.1□□□□□ -0.47
PTPRT-210ENST00000617474 FXYD2P54710 66 aa12.1□□□□□ -0.47
PTPRT-210ENST00000617474 GDF5OSQ5U4N7 250 aa12.1□□□□□ -0.47
PTPRT-210ENST00000617474 USP9XQ93008 2570 aaPredicted RBP12.1□□□□□ -0.47
PTPRT-210ENST00000617474 C2orf70A6NJV1 201 aa12.1□□□□□ -0.47
PTPRT-210ENST00000617474 TMEM131Q92545 1883 aa12.1□□□□□ -0.47
PTPRT-210ENST00000617474 SHISA9B4DS77 424 aa12.09□□□□□ -0.47
PTPRT-210ENST00000617474 USP9YO00507 2555 aaPredicted RBP12.09□□□□□ -0.47
PTPRT-210ENST00000617474 IGLV2-8P01709 118 aa12.09□□□□□ -0.47
PTPRT-210ENST00000617474 TP53TG3Q9ULZ0 132 aa12.09□□□□□ -0.47
PTPRT-210ENST00000617474 ARHGAP32A7KAX9 2087 aa12.09□□□□□ -0.47
PTPRT-210ENST00000617474 RBMY1BA6NDE4 496 aaKnown RBP12.09□□□□□ -0.47
PTPRT-210ENST00000617474 RBMY1EA6NEQ0 496 aaKnown RBP12.09□□□□□ -0.47
PTPRT-210ENST00000617474 B4DSR2 109 aa12.09□□□□□ -0.47
PTPRT-210ENST00000617474 RBMY1DP0C7P1 496 aaKnown RBP12.09□□□□□ -0.47
PTPRT-210ENST00000617474 RBMY1A1P0DJD3 496 aaKnown RBP12.09□□□□□ -0.47
PTPRT-210ENST00000617474 RBMY1CP0DJD4 496 aa12.09□□□□□ -0.47
PTPRT-210ENST00000617474 RPL36AP83881 106 aaKnown RBP12.09□□□□□ -0.47
PTPRT-210ENST00000617474 LOXL1Q08397 574 aaPredicted RBP12.09□□□□□ -0.47
PTPRT-210ENST00000617474 RPL36ALQ969Q0 106 aaKnown RBP12.09□□□□□ -0.47
PTPRT-210ENST00000617474 A0A087WX48 190 aa12.09□□□□□ -0.47
PTPRT-210ENST00000617474 PRAC2D3DTV9 90 aa12.09□□□□□ -0.47
PTPRT-210ENST00000617474 CFAP161Q6P656 301 aa12.08□□□□□ -0.48
PTPRT-210ENST00000617474 ZNF415Q09FC8 603 aa12.08□□□□□ -0.48
PTPRT-210ENST00000617474 RPL39LQ96EH5 51 aaKnown RBP12.08□□□□□ -0.48
PTPRT-210ENST00000617474 XCL2Q9UBD3 114 aa12.08□□□□□ -0.48
PTPRT-210ENST00000617474 DEFB1P60022 68 aa12.07□□□□□ -0.48
PTPRT-210ENST00000617474 TRPT1Q86TN4 253 aaKnown RBP12.07□□□□□ -0.48
PTPRT-210ENST00000617474 KLHL30-AS1Q8NEE0 82 aa12.07□□□□□ -0.48
PTPRT-210ENST00000617474 KLF12Q9Y4X4 402 aa12.07□□□□□ -0.48
PTPRT-210ENST00000617474 RPL35AP18077 110 aaKnown RBP12.07□□□□□ -0.48
PTPRT-210ENST00000617474 SIVA1O15304 175 aa12.06□□□□□ -0.48
PTPRT-210ENST00000617474 PPDPFLQ8WWR9 84 aa12.06□□□□□ -0.48
PTPRT-210ENST00000617474 PRO1854Q9UHT4 67 aa12.06□□□□□ -0.48
PTPRT-210ENST00000617474 IGKV1D-37A0A075B6S9 117 aa12.06□□□□□ -0.48
PTPRT-210ENST00000617474 IGLV2-23P01705 113 aa12.06□□□□□ -0.48
PTPRT-210ENST00000617474 CTSGP08311 255 aa12.06□□□□□ -0.48
PTPRT-210ENST00000617474 WFDC2Q14508 124 aa12.06□□□□□ -0.48
PTPRT-210ENST00000617474 SPRY4Q9C004 299 aa12.06□□□□□ -0.48
PTPRT-210ENST00000617474 J3QQQ9 107 aa12.06□□□□□ -0.48
PTPRT-210ENST00000617474 CRPP02741 224 aa12.05□□□□□ -0.48
PTPRT-210ENST00000617474 MALP21145 153 aa12.05□□□□□ -0.48
PTPRT-210ENST00000617474 IGHV1-69DA0A0B4J2H0 117 aa12.05□□□□□ -0.48
PTPRT-210ENST00000617474 K7ENP7 123 aa12.05□□□□□ -0.48
PTPRT-210ENST00000617474 IGHV1-69P01742 117 aa12.05□□□□□ -0.48
PTPRT-210ENST00000617474 OR11H6Q8NGC7 330 aa12.05□□□□□ -0.48
PTPRT-210ENST00000617474 DOPEY1Q5JWR5 2465 aa12.05□□□□□ -0.48
PTPRT-210ENST00000617474 RNF114Q9Y508 228 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms