RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 ZNRF2Q8NHG8 242 aa8.41□□□□□ -1.06
CLTCL1-209ENST00000617103 PLXND1Q9Y4D7 1925 aa8.41□□□□□ -1.06
CLTCL1-209ENST00000617103 GATA1P15976 413 aaPredicted RBP8.41□□□□□ -1.06
CLTCL1-209ENST00000617103 TMEM243Q9BU79 118 aa8.41□□□□□ -1.06
CLTCL1-209ENST00000617103 EML6Q6ZMW3 1958 aa8.4□□□□□ -1.06
CLTCL1-209ENST00000617103 RBAKDNA6NC62 111 aa8.4□□□□□ -1.06
CLTCL1-209ENST00000617103 GP9P14770 177 aa8.4□□□□□ -1.06
CLTCL1-209ENST00000617103 RPL32P62910 135 aaKnown RBP8.4□□□□□ -1.06
CLTCL1-209ENST00000617103 KLHL30-AS1Q8NEE0 82 aa8.4□□□□□ -1.06
CLTCL1-209ENST00000617103 XCL2Q9UBD3 114 aa8.4□□□□□ -1.06
CLTCL1-209ENST00000617103 G3V4G9 280 aa8.4□□□□□ -1.06
CLTCL1-209ENST00000617103 DEFB130BP0DP73 79 aa8.4□□□□□ -1.06
CLTCL1-209ENST00000617103 DEFB130AP0DP74 79 aa8.4□□□□□ -1.06
CLTCL1-209ENST00000617103 C8orf31Q8N9H6 132 aa8.4□□□□□ -1.06
CLTCL1-209ENST00000617103 IGHV3-38A0A0C4DH36 116 aa8.4□□□□□ -1.07
CLTCL1-209ENST00000617103 BAALC-AS2P0C853 105 aa8.4□□□□□ -1.07
CLTCL1-209ENST00000617103 CFHR4Q92496 578 aa8.4□□□□□ -1.07
CLTCL1-209ENST00000617103 TRAV12-2A0A075B6T6 113 aa8.4□□□□□ -1.07
CLTCL1-209ENST00000617103 CRLF1O75462 422 aa8.4□□□□□ -1.07
CLTCL1-209ENST00000617103 RBMY1FQ15415 496 aaKnown RBP8.4□□□□□ -1.07
CLTCL1-209ENST00000617103 MRPL53Q96EL3 112 aaKnown RBP8.4□□□□□ -1.07
CLTCL1-209ENST00000617103 NSUN5P1Q3KNT7 163 aa8.39□□□□□ -1.07
CLTCL1-209ENST00000617103 C11orf53Q8IXP5 236 aa8.39□□□□□ -1.07
CLTCL1-209ENST00000617103 FGF23Q9GZV9 251 aaPredicted RBP8.39□□□□□ -1.07
CLTCL1-209ENST00000617103 KAAG1Q9UBP8 84 aa8.39□□□□□ -1.07
CLTCL1-209ENST00000617103 TINCRA0A1B0GVN0 87 aa8.39□□□□□ -1.07
CLTCL1-209ENST00000617103 CR1LQ2VPA4 569 aa8.39□□□□□ -1.07
CLTCL1-209ENST00000617103 GTF3C1Q12789 2109 aa8.39□□□□□ -1.07
CLTCL1-209ENST00000617103 PATE2Q6UY27 113 aa8.39□□□□□ -1.07
CLTCL1-209ENST00000617103 CITED2Q99967 270 aaPredicted RBP8.39□□□□□ -1.07
CLTCL1-209ENST00000617103 NXPH4O95158 308 aa8.38□□□□□ -1.07
CLTCL1-209ENST00000617103 FOXI1Q12951 378 aa8.38□□□□□ -1.07
CLTCL1-209ENST00000617103 DSCR8Q96T75 97 aa8.38□□□□□ -1.07
CLTCL1-209ENST00000617103 TRAV12-1A0A0B4J245 112 aa8.38□□□□□ -1.07
CLTCL1-209ENST00000617103 GTSF1Q8WW33 167 aa8.38□□□□□ -1.07
CLTCL1-209ENST00000617103 FAM167A-AS1Q96KT0 104 aa8.38□□□□□ -1.07
CLTCL1-209ENST00000617103 FOXE3Q13461 319 aa8.38□□□□□ -1.07
CLTCL1-209ENST00000617103 CDK2AP2O75956 126 aa8.38□□□□□ -1.07
CLTCL1-209ENST00000617103 A4D1N5 150 aa8.37□□□□□ -1.07
CLTCL1-209ENST00000617103 PRSS47A8MTI9 375 aa8.37□□□□□ -1.07
CLTCL1-209ENST00000617103 RBM3P98179 157 aaKnown RBP8.37□□□□□ -1.07
CLTCL1-209ENST00000617103 TTTY13Q9BZ97 58 aa8.37□□□□□ -1.07
CLTCL1-209ENST00000617103 WDR81Q562E7 1941 aa8.37□□□□□ -1.07
CLTCL1-209ENST00000617103 LINC01620Q4KN68 170 aa8.37□□□□□ -1.07
CLTCL1-209ENST00000617103 MED13Q9UHV7 2174 aa8.37□□□□□ -1.07
CLTCL1-209ENST00000617103 RS1O15537 224 aa8.37□□□□□ -1.07
CLTCL1-209ENST00000617103 FRMD6-AS1P0C7T7 363 aa8.37□□□□□ -1.07
CLTCL1-209ENST00000617103 TMEM258P61165 79 aa8.37□□□□□ -1.07
CLTCL1-209ENST00000617103 RUSC1-AS1Q66K80 236 aa8.37□□□□□ -1.07
CLTCL1-209ENST00000617103 MSRB1Q9NZV6 116 aa8.37□□□□□ -1.07
CLTCL1-209ENST00000617103 GNRH2O43555 120 aa8.37□□□□□ -1.07
CLTCL1-209ENST00000617103 IGHV1-69P01742 117 aa8.37□□□□□ -1.07
CLTCL1-209ENST00000617103 RNASE13Q5GAN3 156 aaKnown RBP8.37□□□□□ -1.07
CLTCL1-209ENST00000617103 PLXNA2O75051 1894 aa8.37□□□□□ -1.07
CLTCL1-209ENST00000617103 MRAPQ8TCY5 172 aa8.36□□□□□ -1.07
CLTCL1-209ENST00000617103 C11orf1Q9H5F2 150 aa8.36□□□□□ -1.07
CLTCL1-209ENST00000617103 FNDC1Q4ZHG4 1894 aaPredicted RBP8.36□□□□□ -1.07
CLTCL1-209ENST00000617103 IGHV7-4-1A0A0J9YVY3 117 aa8.36□□□□□ -1.07
CLTCL1-209ENST00000617103 IGKV1-17P01599 117 aa8.36□□□□□ -1.07
CLTCL1-209ENST00000617103 KRTAP27-1Q3LI81 207 aa8.36□□□□□ -1.07
CLTCL1-209ENST00000617103 Q9H8V8 135 aa8.36□□□□□ -1.07
CLTCL1-209ENST00000617103 TRAV26-1A0A087WT03 109 aa8.35□□□□□ -1.07
CLTCL1-209ENST00000617103 LY6G6EA0A0G2JKS1 128 aa8.35□□□□□ -1.07
CLTCL1-209ENST00000617103 C2orf70A6NJV1 201 aa8.35□□□□□ -1.07
CLTCL1-209ENST00000617103 TCTEX1D4Q5JR98 221 aa8.35□□□□□ -1.07
CLTCL1-209ENST00000617103 U3KQA8 63 aa8.35□□□□□ -1.07
CLTCL1-209ENST00000617103 NLRC5Q86WI3 1866 aa8.35□□□□□ -1.07
CLTCL1-209ENST00000617103 DYSFO75923 2080 aa8.35□□□□□ -1.07
CLTCL1-209ENST00000617103 MUSTN1Q8IVN3 82 aa8.35□□□□□ -1.07
CLTCL1-209ENST00000617103 RNF138Q8WVD3 245 aa8.35□□□□□ -1.07
CLTCL1-209ENST00000617103 ZNF561-AS1K7EIQ3 104 aa8.35□□□□□ -1.07
CLTCL1-209ENST00000617103 LY6DQ14210 128 aa8.35□□□□□ -1.07
CLTCL1-209ENST00000617103 SUMO4Q6EEV6 95 aa8.35□□□□□ -1.07
CLTCL1-209ENST00000617103 C22orf46C9J442 243 aa8.35□□□□□ -1.07
CLTCL1-209ENST00000617103 ATOX1O00244 68 aa8.35□□□□□ -1.07
CLTCL1-209ENST00000617103 CFHR3Q02985 330 aa8.34□□□□□ -1.07
CLTCL1-209ENST00000617103 RPL39LQ96EH5 51 aaKnown RBP8.34□□□□□ -1.07
CLTCL1-209ENST00000617103 I3L2K1 104 aa8.34□□□□□ -1.07
CLTCL1-209ENST00000617103 MSMBP08118 114 aa8.34□□□□□ -1.07
CLTCL1-209ENST00000617103 HERV-K104P63124 156 aa8.34□□□□□ -1.07
CLTCL1-209ENST00000617103 ATP6V0E2Q8NHE4 81 aa8.34□□□□□ -1.07
CLTCL1-209ENST00000617103 ORMDL1Q9P0S3 153 aa8.34□□□□□ -1.07
CLTCL1-209ENST00000617103 FAM236AA0A1B0GUQ0 79 aa8.34□□□□□ -1.07
CLTCL1-209ENST00000617103 FAM236BA0A1B0GV22 79 aa8.34□□□□□ -1.07
CLTCL1-209ENST00000617103 GATA3P23771 443 aa8.34□□□□□ -1.07
CLTCL1-209ENST00000617103 SPATA12Q7Z6I5 190 aa8.34□□□□□ -1.07
CLTCL1-209ENST00000617103 ICOSQ9Y6W8 199 aa8.34□□□□□ -1.07
CLTCL1-209ENST00000617103 TRAV25A0A0B4J276 109 aa8.34□□□□□ -1.08
CLTCL1-209ENST00000617103 A0A0B4J2C4 111 aa8.34□□□□□ -1.08
CLTCL1-209ENST00000617103 E9PLD3 99 aa8.34□□□□□ -1.08
CLTCL1-209ENST00000617103 F6UB75 175 aa8.34□□□□□ -1.08
CLTCL1-209ENST00000617103 A0A0J9YXV3 536 aa8.33□□□□□ -1.08
CLTCL1-209ENST00000617103 LINC01619G3V211 115 aa8.33□□□□□ -1.08
CLTCL1-209ENST00000617103 K7EIM0 57 aa8.33□□□□□ -1.08
CLTCL1-209ENST00000617103 ZFP2Q6ZN57 461 aa8.33□□□□□ -1.08
CLTCL1-209ENST00000617103 LINC01356Q8N9X3 169 aa8.33□□□□□ -1.08
CLTCL1-209ENST00000617103 ODF1Q14990 250 aa8.33□□□□□ -1.08
CLTCL1-209ENST00000617103 KMT2EQ8IZD2 1858 aa8.33□□□□□ -1.08
CLTCL1-209ENST00000617103 MGAMO43451 1857 aa8.32□□□□□ -1.08
CLTCL1-209ENST00000617103 IGKV1OR2-108A0A075B7D4 117 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms