RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 SHISA9B4DS77 424 aa12.19□□□□□ -0.46
SYNRG-223ENST00000616179 TMEM178BH3BS89 294 aa12.19□□□□□ -0.46
SYNRG-223ENST00000616179 I3L2K1 104 aa12.19□□□□□ -0.46
SYNRG-223ENST00000616179 RNASE4P34096 147 aaKnown RBP12.19□□□□□ -0.46
SYNRG-223ENST00000616179 PDE6HQ13956 83 aa12.19□□□□□ -0.46
SYNRG-223ENST00000616179 CFAP126Q5VTH2 177 aa12.19□□□□□ -0.46
SYNRG-223ENST00000616179 PRSS33Q8NF86 280 aa12.19□□□□□ -0.46
SYNRG-223ENST00000616179 PHLDA1Q8WV24 401 aaPredicted RBP12.19□□□□□ -0.46
SYNRG-223ENST00000616179 WDFY4Q6ZS81 3184 aa12.19□□□□□ -0.46
SYNRG-223ENST00000616179 A0A0U1RRA0 63 aa12.18□□□□□ -0.46
SYNRG-223ENST00000616179 K7EIM0 57 aa12.18□□□□□ -0.46
SYNRG-223ENST00000616179 IGKV3-20P01619 116 aa12.18□□□□□ -0.46
SYNRG-223ENST00000616179 SHISA2Q6UWI4 295 aa12.18□□□□□ -0.46
SYNRG-223ENST00000616179 ADARB2-AS1A8MUL3 147 aa12.17□□□□□ -0.46
SYNRG-223ENST00000616179 BUB1B-PAK6H3BSN5 160 aa12.17□□□□□ -0.46
SYNRG-223ENST00000616179 CDIP1Q9H305 208 aa12.17□□□□□ -0.46
SYNRG-223ENST00000616179 LOXP28300 417 aaPredicted RBP12.17□□□□□ -0.46
SYNRG-223ENST00000616179 METTL26Q96S19 204 aa12.17□□□□□ -0.46
SYNRG-223ENST00000616179 LINC01548A6NM66 108 aa12.17□□□□□ -0.46
SYNRG-223ENST00000616179 ASIPP42127 132 aa12.17□□□□□ -0.46
SYNRG-223ENST00000616179 TEX36Q5VZQ5 186 aa12.17□□□□□ -0.46
SYNRG-223ENST00000616179 RNF185Q96GF1 192 aa12.17□□□□□ -0.46
SYNRG-223ENST00000616179 TP53TG1Q9Y2A0 90 aa12.16□□□□□ -0.46
SYNRG-223ENST00000616179 OR10J6PQ8NGY7 276 aa12.16□□□□□ -0.46
SYNRG-223ENST00000616179 UBTD1Q9HAC8 227 aa12.16□□□□□ -0.46
SYNRG-223ENST00000616179 DPM3Q9P2X0 92 aa12.16□□□□□ -0.46
SYNRG-223ENST00000616179 COLQQ9Y215 455 aaPredicted RBP12.16□□□□□ -0.46
SYNRG-223ENST00000616179 U3KQK5 164 aa12.16□□□□□ -0.46
SYNRG-223ENST00000616179 CTSZQ9UBR2 303 aa12.16□□□□□ -0.46
SYNRG-223ENST00000616179 TRAV4A0A0B4J268 109 aa12.16□□□□□ -0.46
SYNRG-223ENST00000616179 GATA4P43694 442 aa12.16□□□□□ -0.46
SYNRG-223ENST00000616179 NDUFV3P56181 108 aaKnown RBP12.16□□□□□ -0.46
SYNRG-223ENST00000616179 KLRB1Q12918 225 aa12.16□□□□□ -0.46
SYNRG-223ENST00000616179 SORL1Q92673 2214 aa12.15□□□□□ -0.46
SYNRG-223ENST00000616179 LINC00527Q9UJ94 153 aa12.15□□□□□ -0.46
SYNRG-223ENST00000616179 A0A087WWL8 130 aa12.15□□□□□ -0.47
SYNRG-223ENST00000616179 TEX22C9J3V5 150 aa12.15□□□□□ -0.47
SYNRG-223ENST00000616179 MORN3Q6PF18 240 aaPredicted RBP12.15□□□□□ -0.47
SYNRG-223ENST00000616179 IGLV3-9A0A075B6K5 115 aa12.14□□□□□ -0.47
SYNRG-223ENST00000616179 LY6HO94772 140 aa12.14□□□□□ -0.47
SYNRG-223ENST00000616179 NACAE9PAV3 2078 aa12.14□□□□□ -0.47
SYNRG-223ENST00000616179 TRAV8-3A0A0A6YYJ7 113 aa12.14□□□□□ -0.47
SYNRG-223ENST00000616179 IGKV3D-20A0A0C4DH25 116 aa12.14□□□□□ -0.47
SYNRG-223ENST00000616179 C15orf32Q32M92 178 aa12.14□□□□□ -0.47
SYNRG-223ENST00000616179 DUSP14O95147 198 aaKnown RBP12.14□□□□□ -0.47
SYNRG-223ENST00000616179 AGPAT4-IT1Q9H0P7 198 aa12.14□□□□□ -0.47
SYNRG-223ENST00000616179 A4D1N5 150 aa12.13□□□□□ -0.47
SYNRG-223ENST00000616179 CEACAM4O75871 244 aa12.13□□□□□ -0.47
SYNRG-223ENST00000616179 ATXN8Q156A1 80 aa12.13□□□□□ -0.47
SYNRG-223ENST00000616179 NDUFA11Q86Y39 141 aa12.13□□□□□ -0.47
SYNRG-223ENST00000616179 ATP6V0E2Q8NHE4 81 aa12.13□□□□□ -0.47
SYNRG-223ENST00000616179 INS-IGF2F8WCM5 200 aa12.13□□□□□ -0.47
SYNRG-223ENST00000616179 TRBV7-3A0A075B6L6 115 aa12.12□□□□□ -0.47
SYNRG-223ENST00000616179 SRD5A1P18405 259 aa12.12□□□□□ -0.47
SYNRG-223ENST00000616179 H3BMM0 161 aa12.12□□□□□ -0.47
SYNRG-223ENST00000616179 UBE2WQ96B02 151 aa12.12□□□□□ -0.47
SYNRG-223ENST00000616179 C5orf64Q2M2E5 130 aa12.12□□□□□ -0.47
SYNRG-223ENST00000616179 TEX49A0A1B0GTD5 131 aa12.11□□□□□ -0.47
SYNRG-223ENST00000616179 RNASE6Q93091 150 aaKnown RBP12.11□□□□□ -0.47
SYNRG-223ENST00000616179 DPH3P1Q9H4G8 78 aa12.11□□□□□ -0.47
SYNRG-223ENST00000616179 IGLC6P0CF74 106 aa12.11□□□□□ -0.47
SYNRG-223ENST00000616179 RPL32P62910 135 aaKnown RBP12.11□□□□□ -0.47
SYNRG-223ENST00000616179 SPXQ9BT56 116 aa12.11□□□□□ -0.47
SYNRG-223ENST00000616179 SLC50A1Q9BRV3 221 aa12.11□□□□□ -0.47
SYNRG-223ENST00000616179 SMCPP49901 116 aaPredicted RBP12.11□□□□□ -0.47
SYNRG-223ENST00000616179 DEFB1P60022 68 aa12.11□□□□□ -0.47
SYNRG-223ENST00000616179 CARD19Q96LW7 228 aa12.11□□□□□ -0.47
SYNRG-223ENST00000616179 C11orf86A6NJI1 115 aa12.1□□□□□ -0.47
SYNRG-223ENST00000616179 CFC1BP0CG36 223 aa12.1□□□□□ -0.47
SYNRG-223ENST00000616179 CFC1P0CG37 223 aa12.1□□□□□ -0.47
SYNRG-223ENST00000616179 PAPPA-AS1Q5QFB9 102 aa12.1□□□□□ -0.47
SYNRG-223ENST00000616179 BAALCQ8WXS3 180 aa12.1□□□□□ -0.47
SYNRG-223ENST00000616179 DUX3Q96PT4 197 aa12.1□□□□□ -0.47
SYNRG-223ENST00000616179 RPL39P62891 51 aaKnown RBP12.1□□□□□ -0.47
SYNRG-223ENST00000616179 MRPL23Q16540 153 aaKnown RBP12.1□□□□□ -0.47
SYNRG-223ENST00000616179 Q6ZQT7 251 aa12.1□□□□□ -0.47
SYNRG-223ENST00000616179 C22orf34Q6ZV56 151 aa12.1□□□□□ -0.47
SYNRG-223ENST00000616179 IGHG3P01860 377 aa12.1□□□□□ -0.47
SYNRG-223ENST00000616179 FOXC1Q12948 553 aa12.1□□□□□ -0.47
SYNRG-223ENST00000616179 C9orf153Q5TBE3 101 aa12.1□□□□□ -0.47
SYNRG-223ENST00000616179 CHCHD5Q9BSY4 110 aa12.1□□□□□ -0.47
SYNRG-223ENST00000616179 TTC28Q96AY4 2481 aa12.09□□□□□ -0.47
SYNRG-223ENST00000616179 J3QQQ9 107 aa12.09□□□□□ -0.47
SYNRG-223ENST00000616179 PRO0461Q9UI25 63 aa12.09□□□□□ -0.47
SYNRG-223ENST00000616179 FCN3O75636 299 aa12.09□□□□□ -0.47
SYNRG-223ENST00000616179 RS1O15537 224 aa12.09□□□□□ -0.47
SYNRG-223ENST00000616179 Q8N1Y9 231 aa12.09□□□□□ -0.47
SYNRG-223ENST00000616179 LINC00311Q8N616 119 aa12.09□□□□□ -0.47
SYNRG-223ENST00000616179 SPG11Q96JI7 2443 aa12.09□□□□□ -0.47
SYNRG-223ENST00000616179 A0A1W2PNU3 283 aaPredicted RBP12.08□□□□□ -0.48
SYNRG-223ENST00000616179 DEFB124Q8NES8 71 aa12.08□□□□□ -0.48
SYNRG-223ENST00000616179 TRBV6-1A0A0K0K1D8 114 aa12.08□□□□□ -0.48
SYNRG-223ENST00000616179 CD3EP07766 207 aa12.08□□□□□ -0.48
SYNRG-223ENST00000616179 CRIP2P52943 208 aaPredicted RBP12.08□□□□□ -0.48
SYNRG-223ENST00000616179 FAM57AQ8TBR7 257 aa12.07□□□□□ -0.48
SYNRG-223ENST00000616179 CD7P09564 240 aa12.07□□□□□ -0.48
SYNRG-223ENST00000616179 PMVKQ15126 192 aa12.07□□□□□ -0.48
SYNRG-223ENST00000616179 TRAV21A0A0B4J279 112 aa12.06□□□□□ -0.48
SYNRG-223ENST00000616179 CRLF1O75462 422 aa12.06□□□□□ -0.48
SYNRG-223ENST00000616179 Q6ZS46 218 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms