RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 TIMM17AQ99595 171 aa7.03□□□□□ -1.28
TTC28-208ENST00000612946 FGFBP3Q8TAT2 258 aa7.03□□□□□ -1.28
TTC28-208ENST00000612946 TET2Q6N021 2002 aaPredicted RBP7.03□□□□□ -1.28
TTC28-208ENST00000612946 ZNF134P52741 427 aa7.02□□□□□ -1.28
TTC28-208ENST00000612946 TLN2Q9Y4G6 2542 aa7.02□□□□□ -1.28
TTC28-208ENST00000612946 A0A0J9YXY3 114 aa7.02□□□□□ -1.29
TTC28-208ENST00000612946 C11orf86A6NJI1 115 aa7.02□□□□□ -1.29
TTC28-208ENST00000612946 IGLV3-19P01714 112 aa7.02□□□□□ -1.29
TTC28-208ENST00000612946 IGHV1-8P0DP01 117 aa7.02□□□□□ -1.29
TTC28-208ENST00000612946 CTRLP40313 264 aa7.02□□□□□ -1.29
TTC28-208ENST00000612946 DAD1P61803 113 aa7.02□□□□□ -1.29
TTC28-208ENST00000612946 FANCD2OSQ96PS1 177 aa7.02□□□□□ -1.29
TTC28-208ENST00000612946 OPRPNQ99935 248 aaPredicted RBP7.02□□□□□ -1.29
TTC28-208ENST00000612946 Q8TAT8 98 aa7.02□□□□□ -1.29
TTC28-208ENST00000612946 MT-ATP8P03928 68 aa7.02□□□□□ -1.29
TTC28-208ENST00000612946 SPINK2P20155 84 aa7.02□□□□□ -1.29
TTC28-208ENST00000612946 WFDC9Q8NEX5 89 aa7.02□□□□□ -1.29
TTC28-208ENST00000612946 IGF2BP2-AS1Q96M15 143 aa7.02□□□□□ -1.29
TTC28-208ENST00000612946 IGHV1-3A0A0C4DH29 117 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 CRIPAKQ8N1N5 446 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 LTBP1Q14766 1721 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 A0A0U1RRA0 63 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 F5H768 121 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 IGHV1-69P01742 117 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 PRR20EP86478 221 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 PRR20CP86479 221 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 PRR20DP86480 221 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 PRR20BP86481 221 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 PRR20AP86496 221 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 LINC00311Q8N616 119 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 FXYD7P58549 80 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 IGHV3OR16-13A0A075B7E8 117 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 IGHV3-74A0A0B4J1X5 117 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 TDRG1Q3Y452 100 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 C1orf147Q96MC9 270 aaPredicted RBP7.01□□□□□ -1.29
TTC28-208ENST00000612946 CD59P13987 128 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 COLCA1Q6ZS62 124 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 ZNF833PQ6ZTB9 187 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 Q8N1Y9 231 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 IGKV3-20P01619 116 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 MCRIP2Q9BUT9 160 aaKnown RBP7.01□□□□□ -1.29
TTC28-208ENST00000612946 MED14OSP0DP75 135 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 NKAPP1Q8N9T2 125 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 PLA2G2FQ9BZM2 168 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 LRRK2Q5S007 2527 aa7.01□□□□□ -1.29
TTC28-208ENST00000612946 IGHV3-66A0A0C4DH42 116 aa7□□□□□ -1.29
TTC28-208ENST00000612946 TOMM6Q96B49 74 aa7□□□□□ -1.29
TTC28-208ENST00000612946 PRR15LQ9BU68 103 aa7□□□□□ -1.29
TTC28-208ENST00000612946 SMIM26A0A096LP01 95 aa7□□□□□ -1.29
TTC28-208ENST00000612946 IGHV3-49A0A0A0MS15 119 aa7□□□□□ -1.29
TTC28-208ENST00000612946 TRAV3A0A0B4J244 114 aa7□□□□□ -1.29
TTC28-208ENST00000612946 ODF1Q14990 250 aa7□□□□□ -1.29
TTC28-208ENST00000612946 CCL21O00585 134 aa7□□□□□ -1.29
TTC28-208ENST00000612946 ZNF883P0CG24 379 aa7□□□□□ -1.29
TTC28-208ENST00000612946 DAND5Q8N907 189 aa7□□□□□ -1.29
TTC28-208ENST00000612946 ADAMTS20P59510 1910 aa7□□□□□ -1.29
TTC28-208ENST00000612946 A4D1N5 150 aa7□□□□□ -1.29
TTC28-208ENST00000612946 COX7CP15954 63 aa7□□□□□ -1.29
TTC28-208ENST00000612946 PROP1O75360 226 aa6.99□□□□□ -1.29
TTC28-208ENST00000612946 BSPH1Q075Z2 132 aa6.99□□□□□ -1.29
TTC28-208ENST00000612946 SERP1Q9Y6X1 66 aa6.99□□□□□ -1.29
TTC28-208ENST00000612946 LINC01565O15544 149 aa6.99□□□□□ -1.29
TTC28-208ENST00000612946 IGHV1-2P23083 117 aa6.99□□□□□ -1.29
TTC28-208ENST00000612946 CCL4P13236 92 aa6.99□□□□□ -1.29
TTC28-208ENST00000612946 A0A0G2JRQ6 117 aa6.99□□□□□ -1.29
TTC28-208ENST00000612946 Q8TCH9 128 aa6.99□□□□□ -1.29
TTC28-208ENST00000612946 C8orf49Q96NF6 230 aa6.98□□□□□ -1.29
TTC28-208ENST00000612946 IGHV3-35A0A0C4DH35 117 aa6.98□□□□□ -1.29
TTC28-208ENST00000612946 SMIM9A6NGZ8 99 aa6.98□□□□□ -1.29
TTC28-208ENST00000612946 BUB1B-PAK6H3BSN5 160 aa6.98□□□□□ -1.29
TTC28-208ENST00000612946 M0QXV9 152 aa6.98□□□□□ -1.29
TTC28-208ENST00000612946 IGHV3-23P01764 117 aa6.98□□□□□ -1.29
TTC28-208ENST00000612946 CSRP1P21291 193 aaKnown RBP6.98□□□□□ -1.29
TTC28-208ENST00000612946 UPK3BQ9BT76 320 aa6.98□□□□□ -1.29
TTC28-208ENST00000612946 TRGV1A0A0A0MS02 117 aa6.98□□□□□ -1.29
TTC28-208ENST00000612946 C2orf70A6NJV1 201 aa6.98□□□□□ -1.29
TTC28-208ENST00000612946 TEX36Q5VZQ5 186 aa6.98□□□□□ -1.29
TTC28-208ENST00000612946 PRSS22Q9GZN4 317 aa6.98□□□□□ -1.29
TTC28-208ENST00000612946 TP73-AS1Q9UF72 201 aa6.98□□□□□ -1.29
TTC28-208ENST00000612946 IGKV1-6A0A0C4DH72 117 aa6.97□□□□□ -1.29
TTC28-208ENST00000612946 CLUHP3Q96NS8 147 aa6.97□□□□□ -1.29
TTC28-208ENST00000612946 CPAMD8Q8IZJ3 1885 aa6.97□□□□□ -1.29
TTC28-208ENST00000612946 IGHV1OR15-1A0A075B7D0 117 aa6.97□□□□□ -1.29
TTC28-208ENST00000612946 PSPNO60542 156 aa6.97□□□□□ -1.29
TTC28-208ENST00000612946 FHL1Q13642 323 aa6.97□□□□□ -1.29
TTC28-208ENST00000612946 FAM110DQ8TAY7 271 aaPredicted RBP6.97□□□□□ -1.29
TTC28-208ENST00000612946 A0A087WWL8 130 aa6.97□□□□□ -1.29
TTC28-208ENST00000612946 CHKB-CPT1BH3BT56 60 aa6.97□□□□□ -1.29
TTC28-208ENST00000612946 COX7A2LO14548 114 aa6.97□□□□□ -1.29
TTC28-208ENST00000612946 TCL1BO95988 128 aa6.97□□□□□ -1.29
TTC28-208ENST00000612946 ANXA2RQ3ZCQ2 193 aa6.97□□□□□ -1.29
TTC28-208ENST00000612946 METRNQ9UJH8 293 aa6.97□□□□□ -1.29
TTC28-208ENST00000612946 TGFBR3LH3BV60 316 aa6.97□□□□□ -1.29
TTC28-208ENST00000612946 CELA2AP08217 269 aa6.97□□□□□ -1.29
TTC28-208ENST00000612946 DYNAPQ8N1N2 210 aa6.97□□□□□ -1.29
TTC28-208ENST00000612946 FLVCR1-AS1Q8TAF5 88 aa6.97□□□□□ -1.29
TTC28-208ENST00000612946 BUB3O43684 328 aa6.97□□□□□ -1.29
TTC28-208ENST00000612946 YPEL4Q96NS1 127 aa6.97□□□□□ -1.29
TTC28-208ENST00000612946 TINCRA0A1B0GVN0 87 aa6.97□□□□□ -1.29
TTC28-208ENST00000612946 CELA3BP08861 270 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms