RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 VCX2Q9H322 139 aa12.68□□□□□ -0.38
TSKU-205ENST00000612930 A8MWV9 139 aa12.67□□□□□ -0.38
TSKU-205ENST00000612930 TGFAP01135 160 aa12.67□□□□□ -0.38
TSKU-205ENST00000612930 ZFAND6Q6FIF0 208 aa12.67□□□□□ -0.38
TSKU-205ENST00000612930 SLC50A1Q9BRV3 221 aa12.67□□□□□ -0.38
TSKU-205ENST00000612930 TACC2O95359 2948 aa12.67□□□□□ -0.38
TSKU-205ENST00000612930 FAM90A27PA6NNH2 459 aa12.67□□□□□ -0.38
TSKU-205ENST00000612930 NHLRC4P0CG21 123 aaPredicted RBP12.67□□□□□ -0.38
TSKU-205ENST00000612930 TRIOBPQ9H2D6 2365 aa12.67□□□□□ -0.38
TSKU-205ENST00000612930 H3BVH4 76 aa12.66□□□□□ -0.38
TSKU-205ENST00000612930 SUMO2P61956 95 aaKnown RBP12.66□□□□□ -0.38
TSKU-205ENST00000612930 GAGE5Q13069 117 aa12.66□□□□□ -0.38
TSKU-205ENST00000612930 GAGE6Q13070 117 aa12.66□□□□□ -0.38
TSKU-205ENST00000612930 LYRM7Q5U5X0 104 aa12.66□□□□□ -0.38
TSKU-205ENST00000612930 C2orf66Q6UXQ4 117 aa12.66□□□□□ -0.38
TSKU-205ENST00000612930 CITED1Q99966 193 aa12.66□□□□□ -0.38
TSKU-205ENST00000612930 A0A0J9YY99 117 aa12.66□□□□□ -0.38
TSKU-205ENST00000612930 HES1Q14469 280 aa12.66□□□□□ -0.38
TSKU-205ENST00000612930 PLA2G2CQ5R387 149 aa12.66□□□□□ -0.38
TSKU-205ENST00000612930 RPL39LQ96EH5 51 aaKnown RBP12.66□□□□□ -0.38
TSKU-205ENST00000612930 TRBV20-1A0A075B6N2 111 aa12.65□□□□□ -0.38
TSKU-205ENST00000612930 IGHV3-66A0A0C4DH42 116 aa12.65□□□□□ -0.38
TSKU-205ENST00000612930 RNF223E7ERA6 249 aa12.65□□□□□ -0.38
TSKU-205ENST00000612930 SPRY2O43597 315 aa12.65□□□□□ -0.38
TSKU-205ENST00000612930 BUB3O43684 328 aa12.65□□□□□ -0.38
TSKU-205ENST00000612930 CFC1BP0CG36 223 aa12.65□□□□□ -0.38
TSKU-205ENST00000612930 CFC1P0CG37 223 aa12.65□□□□□ -0.38
TSKU-205ENST00000612930 TEX29Q8N6K0 151 aa12.65□□□□□ -0.38
TSKU-205ENST00000612930 E7EQL1 145 aa12.65□□□□□ -0.39
TSKU-205ENST00000612930 DPM3Q9P2X0 92 aa12.65□□□□□ -0.39
TSKU-205ENST00000612930 TRAV8-2A0A0B4J237 113 aa12.64□□□□□ -0.39
TSKU-205ENST00000612930 B5MCH6 92 aa12.64□□□□□ -0.39
TSKU-205ENST00000612930 CRYGDP07320 174 aa12.64□□□□□ -0.39
TSKU-205ENST00000612930 TPRP12270 2363 aaKnown RBP12.64□□□□□ -0.39
TSKU-205ENST00000612930 Q6ZS46 218 aa12.64□□□□□ -0.39
TSKU-205ENST00000612930 A0A0G2JNJ9 132 aa12.64□□□□□ -0.39
TSKU-205ENST00000612930 ZFAND3Q9H8U3 227 aa12.64□□□□□ -0.39
TSKU-205ENST00000612930 Q9UFV3 132 aa12.64□□□□□ -0.39
TSKU-205ENST00000612930 CUL9Q8IWT3 2517 aa12.64□□□□□ -0.39
TSKU-205ENST00000612930 ARHGAP32A7KAX9 2087 aa12.63□□□□□ -0.39
TSKU-205ENST00000612930 AJUBAQ96IF1 538 aa12.63□□□□□ -0.39
TSKU-205ENST00000612930 IGHV3OR16-13A0A075B7E8 117 aa12.63□□□□□ -0.39
TSKU-205ENST00000612930 IGHV3-74A0A0B4J1X5 117 aa12.63□□□□□ -0.39
TSKU-205ENST00000612930 TMEM262E9PQX1 116 aa12.63□□□□□ -0.39
TSKU-205ENST00000612930 IGHV3-30P01768 117 aa12.63□□□□□ -0.39
TSKU-205ENST00000612930 IGHV3-30-5P0DP03 117 aa12.63□□□□□ -0.39
TSKU-205ENST00000612930 PRR9Q5T870 116 aa12.63□□□□□ -0.39
TSKU-205ENST00000612930 C10orf126Q8N4M7 172 aa12.63□□□□□ -0.39
TSKU-205ENST00000612930 C11orf86A6NJI1 115 aa12.62□□□□□ -0.39
TSKU-205ENST00000612930 FAM57AQ8TBR7 257 aa12.62□□□□□ -0.39
TSKU-205ENST00000612930 IGLV4-69A0A075B6H9 119 aa12.62□□□□□ -0.39
TSKU-205ENST00000612930 SRD5A1P18405 259 aa12.62□□□□□ -0.39
TSKU-205ENST00000612930 SCGB2A1O75556 95 aa12.61□□□□□ -0.39
TSKU-205ENST00000612930 EMP1P54849 157 aa12.61□□□□□ -0.39
TSKU-205ENST00000612930 POLEQ07864 2286 aa12.61□□□□□ -0.39
TSKU-205ENST00000612930 CLPSL1A2RUU4 121 aa12.61□□□□□ -0.39
TSKU-205ENST00000612930 CRIP2P52943 208 aaPredicted RBP12.61□□□□□ -0.39
TSKU-205ENST00000612930 TSPEAR-AS2P59090 65 aa12.61□□□□□ -0.39
TSKU-205ENST00000612930 M0R381 172 aa12.6□□□□□ -0.39
TSKU-205ENST00000612930 RHODO00212 210 aa12.6□□□□□ -0.39
TSKU-205ENST00000612930 DUSP14O95147 198 aaKnown RBP12.6□□□□□ -0.39
TSKU-205ENST00000612930 TSHBP01222 138 aa12.6□□□□□ -0.39
TSKU-205ENST00000612930 SCGB1C2P0DMR2 95 aa12.6□□□□□ -0.39
TSKU-205ENST00000612930 C9orf47Q6ZRZ4 202 aa12.6□□□□□ -0.39
TSKU-205ENST00000612930 WNK2Q9Y3S1 2297 aa12.6□□□□□ -0.39
TSKU-205ENST00000612930 CENPVL3A0A0U1RRI6 287 aa12.6□□□□□ -0.39
TSKU-205ENST00000612930 C14orf178Q8N769 122 aaPredicted RBP12.6□□□□□ -0.39
TSKU-205ENST00000612930 PCNX1Q96RV3 2341 aa12.6□□□□□ -0.39
TSKU-205ENST00000612930 SLC25A20O43772 301 aa12.59□□□□□ -0.39
TSKU-205ENST00000612930 PRTN3P24158 256 aa12.59□□□□□ -0.39
TSKU-205ENST00000612930 ADGRG4Q8IZF6 3080 aa12.59□□□□□ -0.39
TSKU-205ENST00000612930 CEP250Q9BV73 2442 aa12.59□□□□□ -0.39
TSKU-205ENST00000612930 IGHV3-49A0A0A0MS15 119 aa12.59□□□□□ -0.39
TSKU-205ENST00000612930 IGF1P05019 195 aa12.59□□□□□ -0.39
TSKU-205ENST00000612930 ANXA2RQ3ZCQ2 193 aa12.59□□□□□ -0.39
TSKU-205ENST00000612930 SLC25A29Q8N8R3 303 aa12.59□□□□□ -0.39
TSKU-205ENST00000612930 PRO1854Q9UHT4 67 aa12.59□□□□□ -0.39
TSKU-205ENST00000612930 LY6G5BQ8NDX9 201 aa12.58□□□□□ -0.4
TSKU-205ENST00000612930 DPH3P1Q9H4G8 78 aa12.58□□□□□ -0.4
TSKU-205ENST00000612930 TRAV4A0A0B4J268 109 aa12.58□□□□□ -0.4
TSKU-205ENST00000612930 CRLF1O75462 422 aa12.58□□□□□ -0.4
TSKU-205ENST00000612930 IGFL3Q6UXB1 125 aa12.58□□□□□ -0.4
TSKU-205ENST00000612930 C9JAW5 83 aa12.57□□□□□ -0.4
TSKU-205ENST00000612930 EIF4EBP3O60516 100 aaPredicted RBP12.57□□□□□ -0.4
TSKU-205ENST00000612930 CLEC3BP05452 202 aa12.57□□□□□ -0.4
TSKU-205ENST00000612930 TRPT1Q86TN4 253 aaKnown RBP12.57□□□□□ -0.4
TSKU-205ENST00000612930 NDUFV3P56181 108 aaKnown RBP12.57□□□□□ -0.4
TSKU-205ENST00000612930 C15orf32Q32M92 178 aa12.57□□□□□ -0.4
TSKU-205ENST00000612930 MRPL53Q96EL3 112 aaKnown RBP12.57□□□□□ -0.4
TSKU-205ENST00000612930 IGHV7-81A0A0B4J1V7 117 aa12.56□□□□□ -0.4
TSKU-205ENST00000612930 J3KRW8 73 aa12.56□□□□□ -0.4
TSKU-205ENST00000612930 MGPP08493 103 aa12.56□□□□□ -0.4
TSKU-205ENST00000612930 GPHB5Q86YW7 130 aa12.56□□□□□ -0.4
TSKU-205ENST00000612930 AMELXQ99217 191 aa12.56□□□□□ -0.4
TSKU-205ENST00000612930 HIF1ANQ9NWT6 349 aa12.56□□□□□ -0.4
TSKU-205ENST00000612930 HERVK_113P61574 105 aa12.56□□□□□ -0.4
TSKU-205ENST00000612930 GAGE2BQ13066 116 aa12.56□□□□□ -0.4
TSKU-205ENST00000612930 GAGE2EQ4V326 116 aa12.56□□□□□ -0.4
TSKU-205ENST00000612930 RAX2Q96IS3 184 aa12.56□□□□□ -0.4
TSKU-205ENST00000612930 GAGE2DQ9UEU5 116 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms