RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 F6UZH7 168 aa16.39■□□□□ 0.21
CDKN3-211ENST00000611205 TYMSP04818 313 aa16.39■□□□□ 0.21
CDKN3-211ENST00000611205 CYCSP99999 105 aaKnown RBP16.39■□□□□ 0.21
CDKN3-211ENST00000611205 SH2D6Q7Z4S9 175 aa16.39■□□□□ 0.21
CDKN3-211ENST00000611205 OTORQ9NRC9 128 aa16.39■□□□□ 0.21
CDKN3-211ENST00000611205 VPS13BQ7Z7G8 4022 aa16.38■□□□□ 0.21
CDKN3-211ENST00000611205 TRAV21A0A0B4J279 112 aa16.38■□□□□ 0.21
CDKN3-211ENST00000611205 FAM74A1Q5RGS3 127 aa16.38■□□□□ 0.21
CDKN3-211ENST00000611205 GOLT1AQ6ZVE7 132 aa16.38■□□□□ 0.21
CDKN3-211ENST00000611205 SCGB1C1Q8TD33 95 aa16.38■□□□□ 0.21
CDKN3-211ENST00000611205 SMIM3Q9BZL3 60 aa16.38■□□□□ 0.21
CDKN3-211ENST00000611205 FAM229AH3BQW9 127 aa16.37■□□□□ 0.21
CDKN3-211ENST00000611205 SDF2L1Q9HCN8 221 aa16.37■□□□□ 0.21
CDKN3-211ENST00000611205 MBD2Q9UBB5 411 aa16.37■□□□□ 0.21
CDKN3-211ENST00000611205 HSPB11Q9Y547 144 aa16.37■□□□□ 0.21
CDKN3-211ENST00000611205 FLG2Q5D862 2391 aaPredicted RBP16.36■□□□□ 0.21
CDKN3-211ENST00000611205 LRCOL1A6NCL2 159 aa16.36■□□□□ 0.21
CDKN3-211ENST00000611205 GATA1P15976 413 aaPredicted RBP16.36■□□□□ 0.21
CDKN3-211ENST00000611205 PPP1R1CQ8WVI7 109 aa16.36■□□□□ 0.21
CDKN3-211ENST00000611205 Q9HAA7 133 aa16.36■□□□□ 0.21
CDKN3-211ENST00000611205 TREM1Q9NP99 234 aa16.36■□□□□ 0.21
CDKN3-211ENST00000611205 TRAV8-1A0A0A6YYK1 113 aa16.35■□□□□ 0.21
CDKN3-211ENST00000611205 A6NHS1 94 aa16.35■□□□□ 0.21
CDKN3-211ENST00000611205 TIRAPP58753 221 aa16.35■□□□□ 0.21
CDKN3-211ENST00000611205 LINC01556Q5JQF7 62 aa16.35■□□□□ 0.21
CDKN3-211ENST00000611205 OR10J3Q5JRS4 329 aa16.35■□□□□ 0.21
CDKN3-211ENST00000611205 TRAV8-6A0A0B4J262 113 aa16.34■□□□□ 0.21
CDKN3-211ENST00000611205 FBLL1A6NHQ2 334 aaKnown RBP16.34■□□□□ 0.21
CDKN3-211ENST00000611205 NTN5Q8WTR8 489 aaPredicted RBP16.34■□□□□ 0.21
CDKN3-211ENST00000611205 TVP23CQ96ET8 276 aa16.34■□□□□ 0.21
CDKN3-211ENST00000611205 KCNS1Q96KK3 526 aa16.34■□□□□ 0.21
CDKN3-211ENST00000611205 BATF3Q9NR55 127 aa16.34■□□□□ 0.21
CDKN3-211ENST00000611205 IBA57-AS1B1ANH7 110 aa16.33■□□□□ 0.2
CDKN3-211ENST00000611205 H2BFSP57053 126 aa16.33■□□□□ 0.2
CDKN3-211ENST00000611205 GNG5P63218 68 aa16.33■□□□□ 0.2
CDKN3-211ENST00000611205 IFITM3Q01628 133 aa16.33■□□□□ 0.2
CDKN3-211ENST00000611205 Q6ZSN1 163 aa16.33■□□□□ 0.2
CDKN3-211ENST00000611205 TMEM70Q9BUB7 260 aa16.33■□□□□ 0.2
CDKN3-211ENST00000611205 A0A1W2PPV4 95 aa16.32■□□□□ 0.2
CDKN3-211ENST00000611205 INMT-MINDY4F8WBC2 141 aa16.32■□□□□ 0.2
CDKN3-211ENST00000611205 IGHV3-30P01768 117 aa16.32■□□□□ 0.2
CDKN3-211ENST00000611205 IGHV3-33P01772 117 aa16.32■□□□□ 0.2
CDKN3-211ENST00000611205 PFN1P07737 140 aaKnown RBP16.32■□□□□ 0.2
CDKN3-211ENST00000611205 IGHV3-30-3P0DP02 117 aa16.32■□□□□ 0.2
CDKN3-211ENST00000611205 IGHV3-30-5P0DP03 117 aa16.32■□□□□ 0.2
CDKN3-211ENST00000611205 Q8N814 137 aa16.32■□□□□ 0.2
CDKN3-211ENST00000611205 SLC25A29Q8N8R3 303 aa16.32■□□□□ 0.2
CDKN3-211ENST00000611205 ASB13Q8WXK3 278 aa16.32■□□□□ 0.2
CDKN3-211ENST00000611205 SGK494Q96LW2 274 aa16.32■□□□□ 0.2
CDKN3-211ENST00000611205 MARVELD1Q9BSK0 173 aa16.32■□□□□ 0.2
CDKN3-211ENST00000611205 MPC2O95563 127 aa16.31■□□□□ 0.2
CDKN3-211ENST00000611205 PET100P0DJ07 73 aa16.31■□□□□ 0.2
CDKN3-211ENST00000611205 RPL12P30050 165 aaKnown RBP16.31■□□□□ 0.2
CDKN3-211ENST00000611205 ACOT6Q3I5F7 207 aaPredicted RBP16.31■□□□□ 0.2
CDKN3-211ENST00000611205 PQLC2Q6ZP29 291 aa16.31■□□□□ 0.2
CDKN3-211ENST00000611205 PRADC1Q9BSG0 188 aa16.31■□□□□ 0.2
CDKN3-211ENST00000611205 IGHV3-73A0A0B4J1V6 119 aa16.3■□□□□ 0.2
CDKN3-211ENST00000611205 HMGB3O15347 200 aaKnown RBP16.3■□□□□ 0.2
CDKN3-211ENST00000611205 ZNF876PQ49A33 203 aa16.3■□□□□ 0.2
CDKN3-211ENST00000611205 RAB2AP61019 212 aa16.29■□□□□ 0.2
CDKN3-211ENST00000611205 RHOHQ15669 191 aa16.29■□□□□ 0.2
CDKN3-211ENST00000611205 ARL6IP6Q8N6S5 226 aa16.29■□□□□ 0.2
CDKN3-211ENST00000611205 NDFIP1Q9BT67 221 aa16.29■□□□□ 0.2
CDKN3-211ENST00000611205 RS1O15537 224 aa16.28■□□□□ 0.2
CDKN3-211ENST00000611205 CFAP126Q5VTH2 177 aa16.28■□□□□ 0.2
CDKN3-211ENST00000611205 DPPA3Q6W0C5 159 aa16.28■□□□□ 0.2
CDKN3-211ENST00000611205 WFDC1Q9HC57 220 aa16.28■□□□□ 0.2
CDKN3-211ENST00000611205 BOLA1Q9Y3E2 137 aa16.28■□□□□ 0.2
CDKN3-211ENST00000611205 SSNA1O43805 119 aa16.27■□□□□ 0.2
CDKN3-211ENST00000611205 LELP1Q5T871 98 aa16.27■□□□□ 0.2
CDKN3-211ENST00000611205 TRBV6-4A0A1B0GX49 114 aa16.26■□□□□ 0.19
CDKN3-211ENST00000611205 DEFA1P59665 94 aa16.26■□□□□ 0.19
CDKN3-211ENST00000611205 DEFA3P59666 94 aa16.26■□□□□ 0.19
CDKN3-211ENST00000611205 FAM30AQ9NZY2 134 aa16.26■□□□□ 0.19
CDKN3-211ENST00000611205 MYCBP2O75592 4640 aa16.26■□□□□ 0.19
CDKN3-211ENST00000611205 SRRM2Q9UQ35 2752 aaKnown RBP16.26■□□□□ 0.19
CDKN3-211ENST00000611205 CIDEAO60543 219 aa16.25■□□□□ 0.19
CDKN3-211ENST00000611205 ZNF80P51504 273 aaPredicted RBP16.25■□□□□ 0.19
CDKN3-211ENST00000611205 OR10G9Q8NGN4 311 aa16.25■□□□□ 0.19
CDKN3-211ENST00000611205 OR10G7Q8NGN6 311 aa16.25■□□□□ 0.19
CDKN3-211ENST00000611205 C11orf21Q9P2W6 132 aa16.25■□□□□ 0.19
CDKN3-211ENST00000611205 ARL14EPLP0DKL9 152 aa16.24■□□□□ 0.19
CDKN3-211ENST00000611205 TMEM75Q8N9X5 138 aa16.24■□□□□ 0.19
CDKN3-211ENST00000611205 ATP6V0E2Q8NHE4 81 aa16.24■□□□□ 0.19
CDKN3-211ENST00000611205 GTSF1LQ9H1H1 148 aa16.24■□□□□ 0.19
CDKN3-211ENST00000611205 PGPEP1LA6NFU8 196 aa16.23■□□□□ 0.19
CDKN3-211ENST00000611205 TAAR5O14804 337 aa16.23■□□□□ 0.19
CDKN3-211ENST00000611205 GCGP01275 180 aa16.23■□□□□ 0.19
CDKN3-211ENST00000611205 ZNF506Q5JVG8 444 aa16.23■□□□□ 0.19
CDKN3-211ENST00000611205 C9orf85Q96MD7 179 aa16.23■□□□□ 0.19
CDKN3-211ENST00000611205 SERTM2A0A1B0GWG4 89 aa16.22■□□□□ 0.19
CDKN3-211ENST00000611205 CDC34P49427 236 aaPredicted RBP16.22■□□□□ 0.19
CDKN3-211ENST00000611205 TM2D2Q9BX73 214 aa16.22■□□□□ 0.19
CDKN3-211ENST00000611205 J3QL48 77 aa16.21■□□□□ 0.19
CDKN3-211ENST00000611205 K7EQM0 130 aa16.21■□□□□ 0.19
CDKN3-211ENST00000611205 TCRAP04437 139 aa16.21■□□□□ 0.19
CDKN3-211ENST00000611205 MGST1P10620 155 aaKnown RBP16.21■□□□□ 0.19
CDKN3-211ENST00000611205 LAGE3Q14657 143 aa16.21■□□□□ 0.19
CDKN3-211ENST00000611205 ZFP69Q49AA0 526 aa16.21■□□□□ 0.19
CDKN3-211ENST00000611205 C5orf17Q8NAS9 161 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms