RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 HLA-DRB4P13762 266 aa12.97□□□□□ -0.33
TNIP1-220ENST00000610535 SPAG8Q99932 426 aaPredicted RBP12.97□□□□□ -0.33
TNIP1-220ENST00000610535 HLA-DRB4X5D2U9 266 aa12.97□□□□□ -0.33
TNIP1-220ENST00000610535 CD300EQ496F6 205 aaPredicted RBP12.97□□□□□ -0.33
TNIP1-220ENST00000610535 CCDC144NLQ6NUI1 221 aa12.97□□□□□ -0.33
TNIP1-220ENST00000610535 LINC01548A6NM66 108 aa12.96□□□□□ -0.33
TNIP1-220ENST00000610535 PRSS47A8MTI9 375 aa12.96□□□□□ -0.33
TNIP1-220ENST00000610535 IGF1P05019 195 aa12.96□□□□□ -0.33
TNIP1-220ENST00000610535 TIMD4Q96H15 378 aa12.96□□□□□ -0.33
TNIP1-220ENST00000610535 SLC50A1Q9BRV3 221 aa12.96□□□□□ -0.33
TNIP1-220ENST00000610535 ZFHX3Q15911 3703 aa12.96□□□□□ -0.34
TNIP1-220ENST00000610535 G3V318 75 aa12.96□□□□□ -0.34
TNIP1-220ENST00000610535 TAL2Q16559 108 aa12.96□□□□□ -0.34
TNIP1-220ENST00000610535 SFTA2Q6UW10 78 aa12.96□□□□□ -0.34
TNIP1-220ENST00000610535 CYSLTR1Q9Y271 337 aa12.96□□□□□ -0.34
TNIP1-220ENST00000610535 TRBV7-3A0A075B6L6 115 aa12.95□□□□□ -0.34
TNIP1-220ENST00000610535 PLNP26678 52 aa12.95□□□□□ -0.34
TNIP1-220ENST00000610535 PRR9Q5T870 116 aa12.95□□□□□ -0.34
TNIP1-220ENST00000610535 C8orf86Q6ZUL3 223 aa12.95□□□□□ -0.34
TNIP1-220ENST00000610535 CCDC140Q96MF4 163 aa12.95□□□□□ -0.34
TNIP1-220ENST00000610535 CHTOPQ9Y3Y2 248 aaKnown RBP12.95□□□□□ -0.34
TNIP1-220ENST00000610535 CCL21O00585 134 aa12.95□□□□□ -0.34
TNIP1-220ENST00000610535 ATP6V0E1O15342 81 aa12.95□□□□□ -0.34
TNIP1-220ENST00000610535 EBI3Q14213 229 aa12.95□□□□□ -0.34
TNIP1-220ENST00000610535 H7C1H1 209 aa12.94□□□□□ -0.34
TNIP1-220ENST00000610535 RRN3P1Q2M238 152 aa12.94□□□□□ -0.34
TNIP1-220ENST00000610535 GAGE13Q4V321 117 aa12.94□□□□□ -0.34
TNIP1-220ENST00000610535 F8VRH5 84 aa12.94□□□□□ -0.34
TNIP1-220ENST00000610535 ZFP36P26651 326 aaKnown RBP12.94□□□□□ -0.34
TNIP1-220ENST00000610535 ATP5G2Q06055 141 aa12.94□□□□□ -0.34
TNIP1-220ENST00000610535 SMIM2Q9BVW6 85 aa12.94□□□□□ -0.34
TNIP1-220ENST00000610535 HIVEP3Q5T1R4 2406 aa12.93□□□□□ -0.34
TNIP1-220ENST00000610535 FAM110DQ8TAY7 271 aaPredicted RBP12.93□□□□□ -0.34
TNIP1-220ENST00000610535 SCGB3A1Q96QR1 104 aa12.93□□□□□ -0.34
TNIP1-220ENST00000610535 VKORC1Q9BQB6 163 aa12.93□□□□□ -0.34
TNIP1-220ENST00000610535 MYMXA0A1B0GTQ4 84 aa12.93□□□□□ -0.34
TNIP1-220ENST00000610535 OR11H12B2RN74 326 aa12.93□□□□□ -0.34
TNIP1-220ENST00000610535 J3QR89 54 aa12.93□□□□□ -0.34
TNIP1-220ENST00000610535 RAB9AP51151 201 aa12.93□□□□□ -0.34
TNIP1-220ENST00000610535 OR11H1Q8NG94 326 aa12.93□□□□□ -0.34
TNIP1-220ENST00000610535 OR11H2Q8NH07 326 aa12.93□□□□□ -0.34
TNIP1-220ENST00000610535 M0R381 172 aa12.92□□□□□ -0.34
TNIP1-220ENST00000610535 DEFB104AQ8WTQ1 72 aa12.92□□□□□ -0.34
TNIP1-220ENST00000610535 PRO0461Q9UI25 63 aa12.92□□□□□ -0.34
TNIP1-220ENST00000610535 RPL39LQ96EH5 51 aaKnown RBP12.92□□□□□ -0.34
TNIP1-220ENST00000610535 IGHV4-4A0A075B6R2 117 aa12.91□□□□□ -0.34
TNIP1-220ENST00000610535 C9orf47Q6ZRZ4 202 aa12.91□□□□□ -0.34
TNIP1-220ENST00000610535 A0A1B0GWB2 263 aa12.91□□□□□ -0.34
TNIP1-220ENST00000610535 DEFB1P60022 68 aa12.91□□□□□ -0.34
TNIP1-220ENST00000610535 LY6DQ14210 128 aa12.91□□□□□ -0.34
TNIP1-220ENST00000610535 MORN3Q6PF18 240 aaPredicted RBP12.91□□□□□ -0.34
TNIP1-220ENST00000610535 RASL10AQ92737 203 aa12.9□□□□□ -0.34
TNIP1-220ENST00000610535 UTP20O75691 2785 aaKnown RBP12.9□□□□□ -0.34
TNIP1-220ENST00000610535 TRAV12-1A0A0B4J245 112 aa12.9□□□□□ -0.34
TNIP1-220ENST00000610535 LGALS1P09382 135 aaKnown RBP12.9□□□□□ -0.34
TNIP1-220ENST00000610535 C14orf178Q8N769 122 aaPredicted RBP12.9□□□□□ -0.34
TNIP1-220ENST00000610535 METTL26Q96S19 204 aa12.9□□□□□ -0.34
TNIP1-220ENST00000610535 SUMO2P61956 95 aaKnown RBP12.9□□□□□ -0.35
TNIP1-220ENST00000610535 SCGB2A2Q13296 93 aa12.9□□□□□ -0.35
TNIP1-220ENST00000610535 NEXN-AS1Q8NBZ9 246 aa12.9□□□□□ -0.35
TNIP1-220ENST00000610535 C16orf92Q96LL3 132 aa12.9□□□□□ -0.35
TNIP1-220ENST00000610535 HIF1ANQ9NWT6 349 aa12.9□□□□□ -0.35
TNIP1-220ENST00000610535 PGPEP1Q9NXJ5 209 aa12.9□□□□□ -0.35
TNIP1-220ENST00000610535 CRYBG3Q68DQ2 2970 aa12.89□□□□□ -0.35
TNIP1-220ENST00000610535 OOSP1A8MZH6 123 aa12.89□□□□□ -0.35
TNIP1-220ENST00000610535 HOXA3O43365 443 aaPredicted RBP12.89□□□□□ -0.35
TNIP1-220ENST00000610535 MINOS1Q5TGZ0 78 aa12.89□□□□□ -0.35
TNIP1-220ENST00000610535 TOMM6Q96B49 74 aa12.89□□□□□ -0.35
TNIP1-220ENST00000610535 MRAP2Q96G30 205 aa12.89□□□□□ -0.35
TNIP1-220ENST00000610535 C20orf173Q96LM9 149 aa12.89□□□□□ -0.35
TNIP1-220ENST00000610535 MINOS1-NBL1R4GNA1 71 aa12.89□□□□□ -0.35
TNIP1-220ENST00000610535 SPATA25Q9BR10 227 aa12.89□□□□□ -0.35
TNIP1-220ENST00000610535 C20orf78Q9BR46 151 aa12.89□□□□□ -0.35
TNIP1-220ENST00000610535 PIEZO1Q92508 2521 aa12.88□□□□□ -0.35
TNIP1-220ENST00000610535 WFDC12Q8WWY7 111 aa12.88□□□□□ -0.35
TNIP1-220ENST00000610535 PRADC1Q9BSG0 188 aa12.88□□□□□ -0.35
TNIP1-220ENST00000610535 MRPL16Q9NX20 251 aaKnown RBP12.88□□□□□ -0.35
TNIP1-220ENST00000610535 SPG11Q96JI7 2443 aa12.87□□□□□ -0.35
TNIP1-220ENST00000610535 NDUFS8O00217 210 aa12.87□□□□□ -0.35
TNIP1-220ENST00000610535 ORMDL2Q53FV1 153 aa12.87□□□□□ -0.35
TNIP1-220ENST00000610535 C1orf122Q6ZSJ8 110 aa12.87□□□□□ -0.35
TNIP1-220ENST00000610535 BAALCQ8WXS3 180 aa12.87□□□□□ -0.35
TNIP1-220ENST00000610535 AJUBAQ96IF1 538 aa12.87□□□□□ -0.35
TNIP1-220ENST00000610535 PKD1L2Q7Z442 2459 aa12.87□□□□□ -0.35
TNIP1-220ENST00000610535 PRSS29PA6NIE9 313 aa12.87□□□□□ -0.35
TNIP1-220ENST00000610535 APOMO95445 188 aa12.87□□□□□ -0.35
TNIP1-220ENST00000610535 SCGB1A1P11684 91 aa12.87□□□□□ -0.35
TNIP1-220ENST00000610535 C2orf66Q6UXQ4 117 aa12.87□□□□□ -0.35
TNIP1-220ENST00000610535 KLHL30-AS1Q8NEE0 82 aa12.87□□□□□ -0.35
TNIP1-220ENST00000610535 PLEKHB2Q96CS7 222 aa12.87□□□□□ -0.35
TNIP1-220ENST00000610535 LINC00527Q9UJ94 153 aa12.87□□□□□ -0.35
TNIP1-220ENST00000610535 CFAP46Q8IYW2 2715 aa12.86□□□□□ -0.35
TNIP1-220ENST00000610535 MGPP08493 103 aa12.86□□□□□ -0.35
TNIP1-220ENST00000610535 EMP1P54849 157 aa12.86□□□□□ -0.35
TNIP1-220ENST00000610535 SCGB1D4Q6XE38 83 aa12.86□□□□□ -0.35
TNIP1-220ENST00000610535 EEF1AKMT3Q96AZ1 226 aa12.86□□□□□ -0.35
TNIP1-220ENST00000610535 ATP6V0BQ99437 205 aa12.86□□□□□ -0.35
TNIP1-220ENST00000610535 LOC107984156A0A0G2JMH3 177 aa12.86□□□□□ -0.35
TNIP1-220ENST00000610535 ZNF815PA8K554 130 aa12.86□□□□□ -0.35
TNIP1-220ENST00000610535 S100A4P26447 101 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms