RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 CHAC1Q9BUX1 264 aa8.11□□□□□ -1.11
CTCFL-216ENST00000608263 A0A1B0GXF2 115 aa8.11□□□□□ -1.11
CTCFL-216ENST00000608263 C19orf71A6NCJ1 209 aa8.11□□□□□ -1.11
CTCFL-216ENST00000608263 LAGE3Q14657 143 aa8.11□□□□□ -1.11
CTCFL-216ENST00000608263 AMTNQ6UX39 209 aa8.11□□□□□ -1.11
CTCFL-216ENST00000608263 DEFB125Q8N687 156 aa8.11□□□□□ -1.11
CTCFL-216ENST00000608263 MRPL35Q9NZE8 188 aaKnown RBP8.11□□□□□ -1.11
CTCFL-216ENST00000608263 IGHV2-70DA0A0C4DH43 119 aa8.1□□□□□ -1.11
CTCFL-216ENST00000608263 K7EP13 123 aa8.1□□□□□ -1.11
CTCFL-216ENST00000608263 SNRPD3P62318 126 aaKnown RBP8.1□□□□□ -1.11
CTCFL-216ENST00000608263 DTX2Q86UW9 622 aa8.1□□□□□ -1.11
CTCFL-216ENST00000608263 Q8N976 141 aa8.1□□□□□ -1.11
CTCFL-216ENST00000608263 KIR2DL4Q99706 377 aa8.1□□□□□ -1.11
CTCFL-216ENST00000608263 MLST8Q9BVC4 326 aa8.1□□□□□ -1.11
CTCFL-216ENST00000608263 HELZ2Q9BYK8 2649 aaKnown RBP8.1□□□□□ -1.11
CTCFL-216ENST00000608263 ZNF815PA8K554 130 aa8.1□□□□□ -1.11
CTCFL-216ENST00000608263 PDE6HQ13956 83 aa8.1□□□□□ -1.11
CTCFL-216ENST00000608263 KLHL30-AS1Q8NEE0 82 aa8.1□□□□□ -1.11
CTCFL-216ENST00000608263 CHTOPQ9Y3Y2 248 aaKnown RBP8.1□□□□□ -1.11
CTCFL-216ENST00000608263 A0A087WWL8 130 aa8.09□□□□□ -1.11
CTCFL-216ENST00000608263 F6UB75 175 aa8.09□□□□□ -1.11
CTCFL-216ENST00000608263 FOXE3Q13461 319 aa8.09□□□□□ -1.11
CTCFL-216ENST00000608263 RRN3P1Q2M238 152 aa8.09□□□□□ -1.11
CTCFL-216ENST00000608263 CRYGCP07315 174 aa8.09□□□□□ -1.11
CTCFL-216ENST00000608263 ZNF688P0C7X2 276 aa8.09□□□□□ -1.11
CTCFL-216ENST00000608263 C1orf122Q6ZSJ8 110 aa8.09□□□□□ -1.11
CTCFL-216ENST00000608263 C3orf56Q8N813 242 aa8.09□□□□□ -1.11
CTCFL-216ENST00000608263 SCRT2Q9NQ03 307 aa8.09□□□□□ -1.11
CTCFL-216ENST00000608263 WDFY3Q8IZQ1 3526 aa8.08□□□□□ -1.12
CTCFL-216ENST00000608263 M0R1W7 72 aa8.08□□□□□ -1.12
CTCFL-216ENST00000608263 FCN3O75636 299 aa8.08□□□□□ -1.12
CTCFL-216ENST00000608263 CFHR4Q92496 578 aa8.08□□□□□ -1.12
CTCFL-216ENST00000608263 DUX3Q96PT4 197 aa8.08□□□□□ -1.12
CTCFL-216ENST00000608263 PRORYQ9H606 182 aa8.08□□□□□ -1.12
CTCFL-216ENST00000608263 ADAMTS20P59510 1910 aa8.08□□□□□ -1.12
CTCFL-216ENST00000608263 IGHV1-69DA0A0B4J2H0 117 aa8.08□□□□□ -1.12
CTCFL-216ENST00000608263 IGKV3OR2-268A0A0C4DH90 116 aa8.08□□□□□ -1.12
CTCFL-216ENST00000608263 IGHV1-69P01742 117 aa8.08□□□□□ -1.12
CTCFL-216ENST00000608263 TMEM95Q3KNT9 176 aa8.08□□□□□ -1.12
CTCFL-216ENST00000608263 LINC01545Q5VT33 79 aa8.08□□□□□ -1.12
CTCFL-216ENST00000608263 PIP4P2Q8N4L2 257 aa8.08□□□□□ -1.12
CTCFL-216ENST00000608263 AGPAT4-IT1Q9H0P7 198 aa8.08□□□□□ -1.12
CTCFL-216ENST00000608263 IGHV3-73A0A0B4J1V6 119 aa8.08□□□□□ -1.12
CTCFL-216ENST00000608263 TMEM238LA0A1B0GVL6 79 aa8.08□□□□□ -1.12
CTCFL-216ENST00000608263 A6NJY4 79 aa8.08□□□□□ -1.12
CTCFL-216ENST00000608263 LGALS3P17931 250 aaKnown RBP8.08□□□□□ -1.12
CTCFL-216ENST00000608263 ZNF80P51504 273 aaPredicted RBP8.08□□□□□ -1.12
CTCFL-216ENST00000608263 CDSNQ15517 529 aa8.08□□□□□ -1.12
CTCFL-216ENST00000608263 ETDBQ3ZM63 59 aa8.08□□□□□ -1.12
CTCFL-216ENST00000608263 TRAV12-3A0A0B4J271 114 aa8.07□□□□□ -1.12
CTCFL-216ENST00000608263 C9orf118A6NHY6 69 aa8.07□□□□□ -1.12
CTCFL-216ENST00000608263 LGALS9BQ3B8N2 356 aa8.07□□□□□ -1.12
CTCFL-216ENST00000608263 MINOS1Q5TGZ0 78 aa8.07□□□□□ -1.12
CTCFL-216ENST00000608263 LGALS9CQ6DKI2 356 aa8.07□□□□□ -1.12
CTCFL-216ENST00000608263 RAX2Q96IS3 184 aa8.07□□□□□ -1.12
CTCFL-216ENST00000608263 MINOS1-NBL1R4GNA1 71 aa8.07□□□□□ -1.12
CTCFL-216ENST00000608263 TRAV21A0A0B4J279 112 aa8.07□□□□□ -1.12
CTCFL-216ENST00000608263 IGKV3D-20A0A0C4DH25 116 aa8.07□□□□□ -1.12
CTCFL-216ENST00000608263 OVOL3O00110 214 aa8.07□□□□□ -1.12
CTCFL-216ENST00000608263 NDUFS8O00217 210 aa8.07□□□□□ -1.12
CTCFL-216ENST00000608263 SYNJ2BPP57105 145 aa8.07□□□□□ -1.12
CTCFL-216ENST00000608263 DEFB121Q5J5C9 76 aa8.07□□□□□ -1.12
CTCFL-216ENST00000608263 IGHV4-59P01825 116 aa8.07□□□□□ -1.12
CTCFL-216ENST00000608263 CTSGP08311 255 aa8.07□□□□□ -1.12
CTCFL-216ENST00000608263 CRIP1P50238 77 aa8.07□□□□□ -1.12
CTCFL-216ENST00000608263 UBE2E1P51965 193 aa8.07□□□□□ -1.12
CTCFL-216ENST00000608263 C8orf86Q6ZUL3 223 aa8.07□□□□□ -1.12
CTCFL-216ENST00000608263 SAMD13Q5VXD3 122 aa8.06□□□□□ -1.12
CTCFL-216ENST00000608263 ADAMTSL5Q6ZMM2 481 aa8.06□□□□□ -1.12
CTCFL-216ENST00000608263 URB1-AS1Q96HZ7 61 aa8.06□□□□□ -1.12
CTCFL-216ENST00000608263 IGHV4-38-2P0DP08 117 aa8.06□□□□□ -1.12
CTCFL-216ENST00000608263 LINC00477Q96M19 166 aa8.06□□□□□ -1.12
CTCFL-216ENST00000608263 COL4A2P08572 1712 aa8.06□□□□□ -1.12
CTCFL-216ENST00000608263 HOXA3O43365 443 aaPredicted RBP8.06□□□□□ -1.12
CTCFL-216ENST00000608263 DEFB113Q30KQ7 82 aa8.06□□□□□ -1.12
CTCFL-216ENST00000608263 ZNF843Q8N446 348 aa8.06□□□□□ -1.12
CTCFL-216ENST00000608263 FANCD2OSQ96PS1 177 aa8.06□□□□□ -1.12
CTCFL-216ENST00000608263 CSTL1Q9H114 145 aa8.06□□□□□ -1.12
CTCFL-216ENST00000608263 LINC00574Q9H8X3 128 aa8.06□□□□□ -1.12
CTCFL-216ENST00000608263 A0A0U1RRA0 63 aa8.06□□□□□ -1.12
CTCFL-216ENST00000608263 H3BRM9 83 aa8.06□□□□□ -1.12
CTCFL-216ENST00000608263 PSMG4Q5JS54 123 aa8.06□□□□□ -1.12
CTCFL-216ENST00000608263 OR5A1Q8NGJ0 315 aa8.06□□□□□ -1.12
CTCFL-216ENST00000608263 NPIPB6E9PJ23 425 aa8.05□□□□□ -1.12
CTCFL-216ENST00000608263 H3BMG7 143 aa8.05□□□□□ -1.12
CTCFL-216ENST00000608263 DEFB112Q30KQ8 113 aa8.05□□□□□ -1.12
CTCFL-216ENST00000608263 PCSK5Q92824 1860 aa8.05□□□□□ -1.12
CTCFL-216ENST00000608263 IGHV7-81A0A0B4J1V7 117 aa8.05□□□□□ -1.12
CTCFL-216ENST00000608263 FXYD2P54710 66 aa8.05□□□□□ -1.12
CTCFL-216ENST00000608263 IGLV11-55A0A075B6I3 123 aa8.05□□□□□ -1.12
CTCFL-216ENST00000608263 MYCNOSP40205 109 aa8.05□□□□□ -1.12
CTCFL-216ENST00000608263 NPC2P61916 151 aa8.05□□□□□ -1.12
CTCFL-216ENST00000608263 PTPRBP23467 1997 aa8.04□□□□□ -1.12
CTCFL-216ENST00000608263 LINC01548A6NM66 108 aa8.04□□□□□ -1.12
CTCFL-216ENST00000608263 TMEM238C9JI98 176 aa8.04□□□□□ -1.12
CTCFL-216ENST00000608263 INS-IGF2F8WCM5 200 aa8.04□□□□□ -1.12
CTCFL-216ENST00000608263 GAGE13Q4V321 117 aa8.04□□□□□ -1.12
CTCFL-216ENST00000608263 LYRM7Q5U5X0 104 aa8.04□□□□□ -1.12
CTCFL-216ENST00000608263 PGPEP1Q9NXJ5 209 aa8.04□□□□□ -1.12
CTCFL-216ENST00000608263 TRAV2A0A0B4J234 112 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms