RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 CTSZQ9UBR2 303 aa8.69□□□□□ -1.02
SHANK2-219ENST00000606715 HERVK_113P63121 156 aa8.69□□□□□ -1.02
SHANK2-219ENST00000606715 ZC2HC1BQ5TFG8 222 aa8.69□□□□□ -1.02
SHANK2-219ENST00000606715 GFRA4Q9GZZ7 299 aa8.69□□□□□ -1.02
SHANK2-219ENST00000606715 ESM1Q9NQ30 184 aa8.69□□□□□ -1.02
SHANK2-219ENST00000606715 PLXND1Q9Y4D7 1925 aa8.69□□□□□ -1.02
SHANK2-219ENST00000606715 LINC01551Q86U37 167 aa8.69□□□□□ -1.02
SHANK2-219ENST00000606715 CADP27708 2225 aa8.68□□□□□ -1.02
SHANK2-219ENST00000606715 TPSG1Q9NRR2 321 aa8.68□□□□□ -1.02
SHANK2-219ENST00000606715 TMEM213A2RRL7 107 aa8.68□□□□□ -1.02
SHANK2-219ENST00000606715 UBE2CO00762 179 aa8.68□□□□□ -1.02
SHANK2-219ENST00000606715 SRSF2Q01130 221 aaKnown RBP8.68□□□□□ -1.02
SHANK2-219ENST00000606715 CENPVL3A0A0U1RRI6 287 aa8.68□□□□□ -1.02
SHANK2-219ENST00000606715 FAM231BA6NCW3 169 aa8.68□□□□□ -1.02
SHANK2-219ENST00000606715 H3BRN7 92 aa8.68□□□□□ -1.02
SHANK2-219ENST00000606715 CXCL1P09341 107 aa8.68□□□□□ -1.02
SHANK2-219ENST00000606715 KIR3DS1Q14943 382 aa8.68□□□□□ -1.02
SHANK2-219ENST00000606715 HIST3H2BBQ8N257 126 aa8.68□□□□□ -1.02
SHANK2-219ENST00000606715 DSCR8Q96T75 97 aa8.68□□□□□ -1.02
SHANK2-219ENST00000606715 MPV17L2Q567V2 206 aa8.68□□□□□ -1.02
SHANK2-219ENST00000606715 Q8NA96 180 aa8.68□□□□□ -1.02
SHANK2-219ENST00000606715 GTF3C1Q12789 2109 aa8.67□□□□□ -1.02
SHANK2-219ENST00000606715 PRSS46E5RG02 174 aa8.67□□□□□ -1.02
SHANK2-219ENST00000606715 ATP6V0E2Q8NHE4 81 aa8.67□□□□□ -1.02
SHANK2-219ENST00000606715 PCNX1Q96RV3 2341 aa8.67□□□□□ -1.02
SHANK2-219ENST00000606715 DEFB135Q30KP9 77 aa8.67□□□□□ -1.02
SHANK2-219ENST00000606715 CITED1Q99966 193 aa8.67□□□□□ -1.02
SHANK2-219ENST00000606715 SEM1Q6ZVN7 128 aa8.67□□□□□ -1.02
SHANK2-219ENST00000606715 ZNF492Q9P255 531 aa8.67□□□□□ -1.02
SHANK2-219ENST00000606715 ZGRF1Q86YA3 2104 aa8.67□□□□□ -1.02
SHANK2-219ENST00000606715 LINC00479Q96M42 142 aa8.67□□□□□ -1.02
SHANK2-219ENST00000606715 DIAPH2-AS1Q14236 149 aa8.67□□□□□ -1.02
SHANK2-219ENST00000606715 ZNF493Q6ZR52 646 aa8.67□□□□□ -1.02
SHANK2-219ENST00000606715 DOCK9Q9BZ29 2069 aa8.66□□□□□ -1.02
SHANK2-219ENST00000606715 WT1-ASQ06250 92 aa8.66□□□□□ -1.02
SHANK2-219ENST00000606715 MAJINQ3KP22 176 aa8.66□□□□□ -1.02
SHANK2-219ENST00000606715 MPDZO75970 2070 aa8.66□□□□□ -1.02
SHANK2-219ENST00000606715 BDP1A6H8Y1 2624 aa8.66□□□□□ -1.02
SHANK2-219ENST00000606715 HAMPP81172 84 aa8.66□□□□□ -1.02
SHANK2-219ENST00000606715 ADAMTSL5Q6ZMM2 481 aa8.66□□□□□ -1.02
SHANK2-219ENST00000606715 DOCK7Q96N67 2140 aa8.66□□□□□ -1.02
SHANK2-219ENST00000606715 TRAV26-2A0A0B4J265 109 aa8.66□□□□□ -1.02
SHANK2-219ENST00000606715 BLCAPP62952 87 aa8.66□□□□□ -1.02
SHANK2-219ENST00000606715 KIAA2026Q5HYC2 2103 aa8.66□□□□□ -1.02
SHANK2-219ENST00000606715 F6UB75 175 aa8.65□□□□□ -1.02
SHANK2-219ENST00000606715 INSL3P51460 131 aa8.65□□□□□ -1.02
SHANK2-219ENST00000606715 CT83Q5H943 113 aa8.65□□□□□ -1.02
SHANK2-219ENST00000606715 Q8N8P6 123 aa8.65□□□□□ -1.02
SHANK2-219ENST00000606715 NPBQ8NG41 125 aa8.65□□□□□ -1.02
SHANK2-219ENST00000606715 PRR25Q96S07 402 aa8.65□□□□□ -1.02
SHANK2-219ENST00000606715 ZNF843Q8N446 348 aa8.65□□□□□ -1.02
SHANK2-219ENST00000606715 IGLV10-54A0A075B6I4 117 aa8.65□□□□□ -1.02
SHANK2-219ENST00000606715 DLEU1O43261 78 aa8.65□□□□□ -1.02
SHANK2-219ENST00000606715 CRYGCP07315 174 aa8.65□□□□□ -1.02
SHANK2-219ENST00000606715 MRPL36Q9P0J6 103 aaKnown RBP8.65□□□□□ -1.02
SHANK2-219ENST00000606715 DENND4CQ5VZ89 1909 aa8.65□□□□□ -1.02
SHANK2-219ENST00000606715 NDUFA12Q9UI09 145 aa8.65□□□□□ -1.03
SHANK2-219ENST00000606715 C3orf79P0CE67 100 aa8.65□□□□□ -1.03
SHANK2-219ENST00000606715 ABCA1O95477 2261 aa8.64□□□□□ -1.03
SHANK2-219ENST00000606715 DEFB4AO15263 64 aa8.64□□□□□ -1.03
SHANK2-219ENST00000606715 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.64□□□□□ -1.03
SHANK2-219ENST00000606715 TMEM89A2RUT3 159 aa8.64□□□□□ -1.03
SHANK2-219ENST00000606715 SYS1-DBNDD2H3BUS1 97 aa8.64□□□□□ -1.03
SHANK2-219ENST00000606715 RNF152Q8N8N0 203 aa8.64□□□□□ -1.03
SHANK2-219ENST00000606715 UBL5Q9BZL1 73 aa8.64□□□□□ -1.03
SHANK2-219ENST00000606715 WNK2Q9Y3S1 2297 aa8.64□□□□□ -1.03
SHANK2-219ENST00000606715 RNASE13Q5GAN3 156 aaKnown RBP8.64□□□□□ -1.03
SHANK2-219ENST00000606715 FAM208BQ5VWN6 2430 aa8.64□□□□□ -1.03
SHANK2-219ENST00000606715 INAFM1C9JVW0 142 aa8.64□□□□□ -1.03
SHANK2-219ENST00000606715 IGLC1P0CG04 106 aa8.64□□□□□ -1.03
SHANK2-219ENST00000606715 TP53BP1Q12888 1972 aaPredicted RBP8.64□□□□□ -1.03
SHANK2-219ENST00000606715 C11orf45Q8TAV5 145 aa8.63□□□□□ -1.03
SHANK2-219ENST00000606715 PLXNB3Q9ULL4 1909 aa8.63□□□□□ -1.03
SHANK2-219ENST00000606715 SHISA2Q6UWI4 295 aa8.63□□□□□ -1.03
SHANK2-219ENST00000606715 IGHV4-4A0A075B6R2 117 aa8.63□□□□□ -1.03
SHANK2-219ENST00000606715 IGHV4OR15-8A0A075B7B6 117 aa8.63□□□□□ -1.03
SHANK2-219ENST00000606715 A0A087WW49 117 aa8.63□□□□□ -1.03
SHANK2-219ENST00000606715 TRAV13-2A0A0B4J235 113 aa8.63□□□□□ -1.03
SHANK2-219ENST00000606715 PRSS57Q6UWY2 283 aa8.63□□□□□ -1.03
SHANK2-219ENST00000606715 GPHB5Q86YW7 130 aa8.63□□□□□ -1.03
SHANK2-219ENST00000606715 AJUBAQ96IF1 538 aa8.63□□□□□ -1.03
SHANK2-219ENST00000606715 SIGLEC8Q9NYZ4 499 aa8.63□□□□□ -1.03
SHANK2-219ENST00000606715 CFHR4Q92496 578 aa8.63□□□□□ -1.03
SHANK2-219ENST00000606715 LOXL1Q08397 574 aaPredicted RBP8.63□□□□□ -1.03
SHANK2-219ENST00000606715 FAM104BQ5XKR9 115 aa8.63□□□□□ -1.03
SHANK2-219ENST00000606715 MRPL52Q86TS9 123 aaKnown RBP8.63□□□□□ -1.03
SHANK2-219ENST00000606715 STPG4Q8N801 248 aa8.63□□□□□ -1.03
SHANK2-219ENST00000606715 MALRD1Q5VYJ5 2156 aa8.62□□□□□ -1.03
SHANK2-219ENST00000606715 DNAJC9-AS1A6NH13 148 aa8.62□□□□□ -1.03
SHANK2-219ENST00000606715 K7EQD1 137 aa8.62□□□□□ -1.03
SHANK2-219ENST00000606715 BOD1L2Q8IYS8 172 aa8.62□□□□□ -1.03
SHANK2-219ENST00000606715 UBE2V1Q13404 147 aa8.62□□□□□ -1.03
SHANK2-219ENST00000606715 AMTNQ6UX39 209 aa8.62□□□□□ -1.03
SHANK2-219ENST00000606715 C4orf3Q8WVX3 66 aa8.62□□□□□ -1.03
SHANK2-219ENST00000606715 TRAV12-1A0A0B4J245 112 aa8.62□□□□□ -1.03
SHANK2-219ENST00000606715 C5orf38Q86SI9 138 aa8.62□□□□□ -1.03
SHANK2-219ENST00000606715 COX7A2LO14548 114 aa8.62□□□□□ -1.03
SHANK2-219ENST00000606715 NDUFS6O75380 124 aaKnown RBP8.61□□□□□ -1.03
SHANK2-219ENST00000606715 LENEPQ9Y5L5 61 aa8.61□□□□□ -1.03
SHANK2-219ENST00000606715 GNRH2O43555 120 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms