RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 RBM12B-AS1Q9P1G2 102 aa6.73□□□□□ -1.33
COMMD3-215ENST00000602574 FAM27BQ5VT28 67 aa6.73□□□□□ -1.33
COMMD3-215ENST00000602574 LYPD5Q6UWN5 251 aa6.73□□□□□ -1.33
COMMD3-215ENST00000602574 CCL4L1Q8NHW4 92 aa6.73□□□□□ -1.33
COMMD3-215ENST00000602574 C11orf45Q8TAV5 145 aa6.73□□□□□ -1.33
COMMD3-215ENST00000602574 ZNF71Q9NQZ8 489 aaPredicted RBP6.73□□□□□ -1.33
COMMD3-215ENST00000602574 H3BTX0 84 aa6.72□□□□□ -1.33
COMMD3-215ENST00000602574 EFNA2O43921 213 aa6.72□□□□□ -1.33
COMMD3-215ENST00000602574 EIF4EBP3O60516 100 aaPredicted RBP6.72□□□□□ -1.33
COMMD3-215ENST00000602574 APOC4P55056 127 aa6.72□□□□□ -1.33
COMMD3-215ENST00000602574 BRWD1-AS2P59051 145 aa6.72□□□□□ -1.33
COMMD3-215ENST00000602574 DEFB110Q30KQ9 67 aa6.72□□□□□ -1.33
COMMD3-215ENST00000602574 FANCD2OSQ96PS1 177 aa6.72□□□□□ -1.33
COMMD3-215ENST00000602574 ICOSQ9Y6W8 199 aa6.72□□□□□ -1.33
COMMD3-215ENST00000602574 TRAV3A0A0B4J244 114 aa6.71□□□□□ -1.33
COMMD3-215ENST00000602574 FAM223BA6NKX1 122 aa6.71□□□□□ -1.33
COMMD3-215ENST00000602574 C17orf98A8MV24 154 aa6.71□□□□□ -1.33
COMMD3-215ENST00000602574 H3BS24 57 aa6.71□□□□□ -1.33
COMMD3-215ENST00000602574 ZNF134P52741 427 aa6.71□□□□□ -1.33
COMMD3-215ENST00000602574 Q1RN00 199 aa6.71□□□□□ -1.33
COMMD3-215ENST00000602574 CXorf67Q86X51 503 aaPredicted RBP6.71□□□□□ -1.33
COMMD3-215ENST00000602574 FAM216BQ8N7L0 139 aa6.71□□□□□ -1.33
COMMD3-215ENST00000602574 HES7Q9BYE0 225 aa6.71□□□□□ -1.33
COMMD3-215ENST00000602574 MOB4Q9Y3A3 225 aa6.71□□□□□ -1.33
COMMD3-215ENST00000602574 VPREB1P12018 145 aa6.71□□□□□ -1.34
COMMD3-215ENST00000602574 LGALS3P17931 250 aaKnown RBP6.71□□□□□ -1.34
COMMD3-215ENST00000602574 LAGE3Q14657 143 aa6.71□□□□□ -1.34
COMMD3-215ENST00000602574 SS18Q15532 418 aa6.71□□□□□ -1.34
COMMD3-215ENST00000602574 SPINK9Q5DT21 86 aa6.71□□□□□ -1.34
COMMD3-215ENST00000602574 ATP5EP2Q5VTU8 51 aa6.71□□□□□ -1.34
COMMD3-215ENST00000602574 KTN1-AS1Q86SY8 53 aa6.71□□□□□ -1.34
COMMD3-215ENST00000602574 NDUFB3O43676 98 aa6.7□□□□□ -1.34
COMMD3-215ENST00000602574 COX7A2P2O60397 106 aa6.7□□□□□ -1.34
COMMD3-215ENST00000602574 C20orf204Q6ZNR8 217 aa6.7□□□□□ -1.34
COMMD3-215ENST00000602574 EEF1AKMT3Q96AZ1 226 aa6.7□□□□□ -1.34
COMMD3-215ENST00000602574 PRR25Q96S07 402 aa6.7□□□□□ -1.34
COMMD3-215ENST00000602574 UBE2D4Q9Y2X8 147 aa6.7□□□□□ -1.34
COMMD3-215ENST00000602574 EP400Q96L91 3159 aa6.7□□□□□ -1.34
COMMD3-215ENST00000602574 C5orf67F2Z3F1 127 aa6.7□□□□□ -1.34
COMMD3-215ENST00000602574 WNT9BO14905 357 aa6.7□□□□□ -1.34
COMMD3-215ENST00000602574 FSTL3O95633 263 aa6.7□□□□□ -1.34
COMMD3-215ENST00000602574 DYNAPQ8N1N2 210 aa6.7□□□□□ -1.34
COMMD3-215ENST00000602574 Q8N2B8 174 aa6.7□□□□□ -1.34
COMMD3-215ENST00000602574 A0A0J9YX75 114 aa6.69□□□□□ -1.34
COMMD3-215ENST00000602574 TMEM75Q8N9X5 138 aa6.69□□□□□ -1.34
COMMD3-215ENST00000602574 Q8NA96 180 aa6.69□□□□□ -1.34
COMMD3-215ENST00000602574 HS3ST6Q96QI5 342 aa6.69□□□□□ -1.34
COMMD3-215ENST00000602574 CNFNQ9BYD5 112 aa6.69□□□□□ -1.34
COMMD3-215ENST00000602574 MRPS21P82921 87 aaKnown RBP6.69□□□□□ -1.34
COMMD3-215ENST00000602574 C10orf113Q5VZT2 155 aa6.69□□□□□ -1.34
COMMD3-215ENST00000602574 PVRIGQ6DKI7 326 aa6.69□□□□□ -1.34
COMMD3-215ENST00000602574 LY6G5BQ8NDX9 201 aa6.69□□□□□ -1.34
COMMD3-215ENST00000602574 RNF185Q96GF1 192 aa6.69□□□□□ -1.34
COMMD3-215ENST00000602574 GON4LQ3T8J9 2241 aa6.68□□□□□ -1.34
COMMD3-215ENST00000602574 SPTY2D1-AS1A0A0U1RR47 76 aa6.68□□□□□ -1.34
COMMD3-215ENST00000602574 FOXF2Q12947 444 aa6.68□□□□□ -1.34
COMMD3-215ENST00000602574 C17orf82Q86X59 251 aaPredicted RBP6.68□□□□□ -1.34
COMMD3-215ENST00000602574 UBALD1Q8TB05 177 aa6.68□□□□□ -1.34
COMMD3-215ENST00000602574 ALPK2Q86TB3 2170 aa6.68□□□□□ -1.34
COMMD3-215ENST00000602574 IGLV3-12A0A075B6K2 115 aa6.67□□□□□ -1.34
COMMD3-215ENST00000602574 IGHV3OR16-10A0A075B7F0 116 aa6.67□□□□□ -1.34
COMMD3-215ENST00000602574 TRAV13-2A0A0B4J235 113 aa6.67□□□□□ -1.34
COMMD3-215ENST00000602574 IGLV2-11P01706 119 aa6.67□□□□□ -1.34
COMMD3-215ENST00000602574 PLGLAQ15195 96 aa6.67□□□□□ -1.34
COMMD3-215ENST00000602574 LYZL1Q6UWQ5 148 aa6.67□□□□□ -1.34
COMMD3-215ENST00000602574 Q8IYB0 196 aa6.67□□□□□ -1.34
COMMD3-215ENST00000602574 LINC00474Q9P2X8 69 aa6.67□□□□□ -1.34
COMMD3-215ENST00000602574 TRAV7A0A075B6U4 112 aa6.67□□□□□ -1.34
COMMD3-215ENST00000602574 IGKV1OR2-108A0A075B7D4 117 aa6.67□□□□□ -1.34
COMMD3-215ENST00000602574 NXPH4O95158 308 aa6.67□□□□□ -1.34
COMMD3-215ENST00000602574 GHRHP01286 108 aa6.67□□□□□ -1.34
COMMD3-215ENST00000602574 IGLV3-19P01714 112 aa6.67□□□□□ -1.34
COMMD3-215ENST00000602574 C2orf83Q53S99 150 aa6.67□□□□□ -1.34
COMMD3-215ENST00000602574 FAM53AQ6NSI3 398 aaPredicted RBP6.67□□□□□ -1.34
COMMD3-215ENST00000602574 C16orf47Q6ZP98 133 aaPredicted RBP6.67□□□□□ -1.34
COMMD3-215ENST00000602574 COX8CQ7Z4L0 72 aa6.67□□□□□ -1.34
COMMD3-215ENST00000602574 C20orf197Q8N268 126 aa6.67□□□□□ -1.34
COMMD3-215ENST00000602574 ZNF491Q8N8L2 437 aa6.67□□□□□ -1.34
COMMD3-215ENST00000602574 PATE1Q8WXA2 126 aa6.67□□□□□ -1.34
COMMD3-215ENST00000602574 SDHAF1A6NFY7 115 aa6.66□□□□□ -1.34
COMMD3-215ENST00000602574 SPRY3O43610 288 aa6.66□□□□□ -1.34
COMMD3-215ENST00000602574 RBM3P98179 157 aaKnown RBP6.66□□□□□ -1.34
COMMD3-215ENST00000602574 MORN5Q5VZ52 161 aa6.66□□□□□ -1.34
COMMD3-215ENST00000602574 Q6ZS46 218 aa6.66□□□□□ -1.34
COMMD3-215ENST00000602574 TOMM6Q96B49 74 aa6.66□□□□□ -1.34
COMMD3-215ENST00000602574 AMELXQ99217 191 aa6.66□□□□□ -1.34
COMMD3-215ENST00000602574 TRBV10-3A0A0K0K1G6 114 aa6.66□□□□□ -1.34
COMMD3-215ENST00000602574 TMEM30CPA0ZSE6 113 aa6.66□□□□□ -1.34
COMMD3-215ENST00000602574 C11orf86A6NJI1 115 aa6.66□□□□□ -1.34
COMMD3-215ENST00000602574 NDUFS5O43920 106 aa6.66□□□□□ -1.34
COMMD3-215ENST00000602574 DAD1P61803 113 aa6.66□□□□□ -1.34
COMMD3-215ENST00000602574 WDR86Q86TI4 376 aa6.66□□□□□ -1.34
COMMD3-215ENST00000602574 Q9H3A6 140 aa6.66□□□□□ -1.34
COMMD3-215ENST00000602574 TET2Q6N021 2002 aaPredicted RBP6.66□□□□□ -1.34
COMMD3-215ENST00000602574 TRBV27A0A0K0K1C4 114 aa6.65□□□□□ -1.34
COMMD3-215ENST00000602574 LYRM9A8MSI8 78 aa6.65□□□□□ -1.34
COMMD3-215ENST00000602574 H0Y8X5 98 aa6.65□□□□□ -1.34
COMMD3-215ENST00000602574 PRSS2P07478 247 aa6.65□□□□□ -1.34
COMMD3-215ENST00000602574 C6orf223Q8N319 242 aa6.65□□□□□ -1.34
COMMD3-215ENST00000602574 NRACQ8N912 160 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms