RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 FAM159AQ6UWV7 190 aa13.27□□□□□ -0.29
VRK3-225ENST00000601912 TRPT1Q86TN4 253 aaKnown RBP13.27□□□□□ -0.29
VRK3-225ENST00000601912 FER1L6-AS1Q8NA97 138 aa13.27□□□□□ -0.29
VRK3-225ENST00000601912 VWFP04275 2813 aa13.26□□□□□ -0.29
VRK3-225ENST00000601912 GRIFINA4D1Z8 144 aa13.26□□□□□ -0.29
VRK3-225ENST00000601912 ZNF324O75467 553 aaPredicted RBP13.26□□□□□ -0.29
VRK3-225ENST00000601912 AMBPP02760 352 aa13.26□□□□□ -0.29
VRK3-225ENST00000601912 MUC21Q5SSG8 566 aa13.26□□□□□ -0.29
VRK3-225ENST00000601912 KCNS1Q96KK3 526 aa13.26□□□□□ -0.29
VRK3-225ENST00000601912 C1orf196B1AJZ1 125 aa13.25□□□□□ -0.29
VRK3-225ENST00000601912 ANXA2RQ3ZCQ2 193 aa13.25□□□□□ -0.29
VRK3-225ENST00000601912 WDR73Q6P4I2 378 aa13.25□□□□□ -0.29
VRK3-225ENST00000601912 STAB1Q9NY15 2570 aa13.25□□□□□ -0.29
VRK3-225ENST00000601912 COL6A5A8TX70 2615 aa13.25□□□□□ -0.29
VRK3-225ENST00000601912 A0A1B0GUT8 65 aa13.24□□□□□ -0.29
VRK3-225ENST00000601912 F2Z2F3 143 aa13.24□□□□□ -0.29
VRK3-225ENST00000601912 IGLC6P0CF74 106 aa13.24□□□□□ -0.29
VRK3-225ENST00000601912 LYZL1Q6UWQ5 148 aa13.24□□□□□ -0.29
VRK3-225ENST00000601912 ZNF575Q86XF7 245 aa13.24□□□□□ -0.29
VRK3-225ENST00000601912 RIGQ13278 110 aa13.24□□□□□ -0.29
VRK3-225ENST00000601912 PRR31Q5SQ13 230 aa13.24□□□□□ -0.29
VRK3-225ENST00000601912 GNB1LQ9BYB4 327 aa13.24□□□□□ -0.29
VRK3-225ENST00000601912 WFDC10AQ9H1F0 79 aa13.24□□□□□ -0.29
VRK3-225ENST00000601912 TRAPPC1Q9Y5R8 145 aa13.24□□□□□ -0.29
VRK3-225ENST00000601912 CRXO43186 299 aaPredicted RBP13.23□□□□□ -0.29
VRK3-225ENST00000601912 TRGC2P03986 189 aa13.23□□□□□ -0.29
VRK3-225ENST00000601912 S100A4P26447 101 aaKnown RBP13.23□□□□□ -0.29
VRK3-225ENST00000601912 CTRLP40313 264 aa13.23□□□□□ -0.29
VRK3-225ENST00000601912 ASIPP42127 132 aa13.23□□□□□ -0.29
VRK3-225ENST00000601912 RAB4BP61018 213 aa13.23□□□□□ -0.29
VRK3-225ENST00000601912 HBBP68871 147 aa13.23□□□□□ -0.29
VRK3-225ENST00000601912 A0A1B0GW15 77 aa13.22□□□□□ -0.29
VRK3-225ENST00000601912 SNURFLB1AK76 121 aa13.22□□□□□ -0.29
VRK3-225ENST00000601912 MT-ND6P03923 174 aa13.22□□□□□ -0.29
VRK3-225ENST00000601912 S100A8P05109 93 aa13.22□□□□□ -0.29
VRK3-225ENST00000601912 CAMPP49913 170 aa13.22□□□□□ -0.29
VRK3-225ENST00000601912 TDRG1Q3Y452 100 aa13.22□□□□□ -0.29
VRK3-225ENST00000601912 C20orf144Q9BQM9 153 aa13.22□□□□□ -0.29
VRK3-225ENST00000601912 A0A1B0GXF2 115 aa13.21□□□□□ -0.29
VRK3-225ENST00000601912 INSP01308 110 aa13.21□□□□□ -0.29
VRK3-225ENST00000601912 ARMS2P0C7Q2 107 aa13.21□□□□□ -0.29
VRK3-225ENST00000601912 FRMD6-AS1P0C7T7 363 aa13.21□□□□□ -0.29
VRK3-225ENST00000601912 RAB5BP61020 215 aa13.21□□□□□ -0.29
VRK3-225ENST00000601912 DEFB125Q8N687 156 aa13.21□□□□□ -0.29
VRK3-225ENST00000601912 FRZBQ92765 325 aa13.21□□□□□ -0.29
VRK3-225ENST00000601912 IGHV1OR15-1A0A075B7D0 117 aa13.21□□□□□ -0.3
VRK3-225ENST00000601912 HLA-DQA1P01909 254 aa13.21□□□□□ -0.3
VRK3-225ENST00000601912 GNRH2O43555 120 aa13.2□□□□□ -0.3
VRK3-225ENST00000601912 OR5AL1P0C617 328 aa13.2□□□□□ -0.3
VRK3-225ENST00000601912 RPL35AP18077 110 aaKnown RBP13.2□□□□□ -0.3
VRK3-225ENST00000601912 FABP9Q0Z7S8 132 aa13.2□□□□□ -0.3
VRK3-225ENST00000601912 DNLZQ5SXM8 178 aa13.2□□□□□ -0.3
VRK3-225ENST00000601912 MORN3Q6PF18 240 aaPredicted RBP13.2□□□□□ -0.3
VRK3-225ENST00000601912 TMEM136Q6ZRR5 245 aa13.2□□□□□ -0.3
VRK3-225ENST00000601912 SSBP4Q9BWG4 385 aaPredicted RBP13.2□□□□□ -0.3
VRK3-225ENST00000601912 XCL2Q9UBD3 114 aa13.2□□□□□ -0.3
VRK3-225ENST00000601912 H3BVH4 76 aa13.19□□□□□ -0.3
VRK3-225ENST00000601912 MED14OSP0DP75 135 aa13.19□□□□□ -0.3
VRK3-225ENST00000601912 CNFNQ9BYD5 112 aa13.19□□□□□ -0.3
VRK3-225ENST00000601912 ZMAT5Q9UDW3 170 aaKnown RBP13.19□□□□□ -0.3
VRK3-225ENST00000601912 SNAI2O43623 268 aa13.18□□□□□ -0.3
VRK3-225ENST00000601912 SSTP61278 116 aa13.18□□□□□ -0.3
VRK3-225ENST00000601912 TWIST1Q15672 202 aa13.18□□□□□ -0.3
VRK3-225ENST00000601912 C1QTNF4Q9BXJ3 329 aa13.18□□□□□ -0.3
VRK3-225ENST00000601912 MRPL18Q9H0U6 180 aaKnown RBP13.18□□□□□ -0.3
VRK3-225ENST00000601912 TIMM8BQ9Y5J9 83 aaPredicted RBP13.18□□□□□ -0.3
VRK3-225ENST00000601912 TRGV11A0A075B6L2 103 aa13.18□□□□□ -0.3
VRK3-225ENST00000601912 MUC21A0A0G2JKD1 596 aa13.18□□□□□ -0.3
VRK3-225ENST00000601912 MUC21A0A140T8X8 626 aa13.18□□□□□ -0.3
VRK3-225ENST00000601912 RBMY1A1P0DJD3 496 aaKnown RBP13.18□□□□□ -0.3
VRK3-225ENST00000601912 RBMY1CP0DJD4 496 aa13.18□□□□□ -0.3
VRK3-225ENST00000601912 NTF3P20783 257 aa13.18□□□□□ -0.3
VRK3-225ENST00000601912 CACNG7P62955 275 aa13.18□□□□□ -0.3
VRK3-225ENST00000601912 RBMY1FQ15415 496 aaKnown RBP13.18□□□□□ -0.3
VRK3-225ENST00000601912 OXLD1Q5BKU9 147 aa13.18□□□□□ -0.3
VRK3-225ENST00000601912 ZFP82Q8N141 532 aa13.18□□□□□ -0.3
VRK3-225ENST00000601912 LINC01587Q99440 93 aa13.18□□□□□ -0.3
VRK3-225ENST00000601912 CBY3A6NI87 242 aa13.17□□□□□ -0.3
VRK3-225ENST00000601912 Q8N1Y9 231 aa13.17□□□□□ -0.3
VRK3-225ENST00000601912 TMEM256Q8N2U0 113 aa13.17□□□□□ -0.3
VRK3-225ENST00000601912 TMEM208Q9BTX3 173 aa13.17□□□□□ -0.3
VRK3-225ENST00000601912 PHLDA3Q9Y5J5 127 aa13.17□□□□□ -0.3
VRK3-225ENST00000601912 TRRAPQ9Y4A5 3859 aa13.17□□□□□ -0.3
VRK3-225ENST00000601912 APCSP02743 223 aa13.16□□□□□ -0.3
VRK3-225ENST00000601912 SPANXN1Q5VSR9 72 aa13.16□□□□□ -0.3
VRK3-225ENST00000601912 MDFIQ99750 246 aa13.16□□□□□ -0.3
VRK3-225ENST00000601912 PHOX2AO14813 284 aa13.15□□□□□ -0.3
VRK3-225ENST00000601912 RNASE3P12724 160 aaKnown RBP13.15□□□□□ -0.3
VRK3-225ENST00000601912 HTN1P15515 57 aa13.15□□□□□ -0.3
VRK3-225ENST00000601912 OR10AG1Q8NH19 301 aa13.15□□□□□ -0.3
VRK3-225ENST00000601912 LINC00467Q9BRT7 94 aa13.15□□□□□ -0.3
VRK3-225ENST00000601912 TP53TG3Q9ULZ0 132 aa13.15□□□□□ -0.3
VRK3-225ENST00000601912 IGHV3-16A0A0C4DH30 117 aa13.15□□□□□ -0.31
VRK3-225ENST00000601912 SCRT2Q9NQ03 307 aa13.15□□□□□ -0.31
VRK3-225ENST00000601912 IGHV4-4A0A075B6R2 117 aa13.14□□□□□ -0.31
VRK3-225ENST00000601912 TRGC1P0CF51 173 aa13.14□□□□□ -0.31
VRK3-225ENST00000601912 GATD1Q8NB37 220 aa13.14□□□□□ -0.31
VRK3-225ENST00000601912 CSTL1Q9H114 145 aa13.14□□□□□ -0.31
VRK3-225ENST00000601912 GOLT1BQ9Y3E0 138 aa13.14□□□□□ -0.31
VRK3-225ENST00000601912 EGFEM1PQ0D2K5 195 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms