RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 MUC21Q5SSG8 566 aa11.83□□□□□ -0.52
SHKBP1-219ENST00000599575 DERL1Q9BUN8 251 aa11.83□□□□□ -0.52
SHKBP1-219ENST00000599575 NUPR2A6NF83 97 aa11.82□□□□□ -0.52
SHKBP1-219ENST00000599575 PRM2P04554 102 aa11.82□□□□□ -0.52
SHKBP1-219ENST00000599575 CENPWQ5EE01 88 aa11.82□□□□□ -0.52
SHKBP1-219ENST00000599575 Q6ZQT7 251 aa11.82□□□□□ -0.52
SHKBP1-219ENST00000599575 C18orf15Q96N68 181 aa11.82□□□□□ -0.52
SHKBP1-219ENST00000599575 NAGKQ9UJ70 344 aa11.82□□□□□ -0.52
SHKBP1-219ENST00000599575 CELA1Q9UNI1 258 aa11.82□□□□□ -0.52
SHKBP1-219ENST00000599575 CRIP1P50238 77 aa11.81□□□□□ -0.52
SHKBP1-219ENST00000599575 NANOS2P60321 138 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-219ENST00000599575 DAD1P61803 113 aa11.81□□□□□ -0.52
SHKBP1-219ENST00000599575 C12orf74Q32Q52 190 aa11.81□□□□□ -0.52
SHKBP1-219ENST00000599575 LINC00612Q8N6U2 182 aa11.81□□□□□ -0.52
SHKBP1-219ENST00000599575 NDUFAF3Q9BU61 184 aa11.81□□□□□ -0.52
SHKBP1-219ENST00000599575 NOP10Q9NPE3 64 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-219ENST00000599575 GSN-AS1Q9NRJ2 163 aa11.81□□□□□ -0.52
SHKBP1-219ENST00000599575 TRAV10A0A0B4J240 114 aa11.8□□□□□ -0.52
SHKBP1-219ENST00000599575 IGHV3-16A0A0C4DH30 117 aa11.8□□□□□ -0.52
SHKBP1-219ENST00000599575 SH2D1AO60880 128 aa11.8□□□□□ -0.52
SHKBP1-219ENST00000599575 LINC01559Q495D7 138 aa11.8□□□□□ -0.52
SHKBP1-219ENST00000599575 FAM74A3Q4VXF1 159 aa11.8□□□□□ -0.52
SHKBP1-219ENST00000599575 DNLZQ5SXM8 178 aa11.8□□□□□ -0.52
SHKBP1-219ENST00000599575 PARLQ9H300 379 aa11.8□□□□□ -0.52
SHKBP1-219ENST00000599575 C11orf21Q9P2W6 132 aa11.8□□□□□ -0.52
SHKBP1-219ENST00000599575 KLK5Q9Y337 293 aaPredicted RBP11.8□□□□□ -0.52
SHKBP1-219ENST00000599575 LY96Q9Y6Y9 160 aa11.8□□□□□ -0.52
SHKBP1-219ENST00000599575 TRBV20OR9-2A0A075B6H5 130 aa11.79□□□□□ -0.52
SHKBP1-219ENST00000599575 SPINK4O60575 86 aa11.79□□□□□ -0.52
SHKBP1-219ENST00000599575 ORM1P02763 201 aa11.79□□□□□ -0.52
SHKBP1-219ENST00000599575 TYMSP04818 313 aa11.79□□□□□ -0.52
SHKBP1-219ENST00000599575 SRP19P09132 144 aaKnown RBP11.79□□□□□ -0.52
SHKBP1-219ENST00000599575 CXCL1P09341 107 aa11.79□□□□□ -0.52
SHKBP1-219ENST00000599575 IFITM2Q01629 132 aa11.79□□□□□ -0.52
SHKBP1-219ENST00000599575 CEMP1Q6PRD7 247 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-219ENST00000599575 PHLDA1Q8WV24 401 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-219ENST00000599575 PCNPQ8WW12 178 aaKnown RBP11.79□□□□□ -0.52
SHKBP1-219ENST00000599575 PTH2Q96A98 100 aa11.79□□□□□ -0.52
SHKBP1-219ENST00000599575 DNAH7Q8WXX0 4024 aa11.79□□□□□ -0.52
SHKBP1-219ENST00000599575 IGKV3D-20A0A0C4DH25 116 aa11.78□□□□□ -0.52
SHKBP1-219ENST00000599575 RAB19A4D1S5 217 aa11.78□□□□□ -0.52
SHKBP1-219ENST00000599575 B4DEV8 164 aa11.78□□□□□ -0.52
SHKBP1-219ENST00000599575 KRBOX1C9JBD0 128 aa11.78□□□□□ -0.52
SHKBP1-219ENST00000599575 IGLV2-8P01709 118 aa11.78□□□□□ -0.52
SHKBP1-219ENST00000599575 TCTAP57738 103 aa11.78□□□□□ -0.52
SHKBP1-219ENST00000599575 PIK3CD-AS1Q5SR53 167 aa11.78□□□□□ -0.52
SHKBP1-219ENST00000599575 CASC10Q5T4H9 136 aa11.78□□□□□ -0.52
SHKBP1-219ENST00000599575 Q6ZTC4 211 aa11.78□□□□□ -0.52
SHKBP1-219ENST00000599575 NHLRC2Q8NBF2 726 aa11.78□□□□□ -0.52
SHKBP1-219ENST00000599575 DAZAP1Q96EP5 407 aaKnown RBP11.78□□□□□ -0.52
SHKBP1-219ENST00000599575 FAM210BQ96KR6 192 aa11.78□□□□□ -0.52
SHKBP1-219ENST00000599575 MDFICQ9P1T7 246 aa11.78□□□□□ -0.52
SHKBP1-219ENST00000599575 GNRH2O43555 120 aa11.77□□□□□ -0.53
SHKBP1-219ENST00000599575 ATP5G1P05496 136 aa11.77□□□□□ -0.53
SHKBP1-219ENST00000599575 DEFB130BP0DP73 79 aa11.77□□□□□ -0.53
SHKBP1-219ENST00000599575 DEFB130AP0DP74 79 aa11.77□□□□□ -0.53
SHKBP1-219ENST00000599575 ASIPP42127 132 aa11.77□□□□□ -0.53
SHKBP1-219ENST00000599575 RASL10AQ92737 203 aa11.77□□□□□ -0.53
SHKBP1-219ENST00000599575 SMIM7Q9BQ49 75 aa11.77□□□□□ -0.53
SHKBP1-219ENST00000599575 DEFB131BA0A096LNP1 70 aa11.76□□□□□ -0.53
SHKBP1-219ENST00000599575 M0R2P5 195 aa11.76□□□□□ -0.53
SHKBP1-219ENST00000599575 MGST1P10620 155 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-219ENST00000599575 S100A4P26447 101 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-219ENST00000599575 IL36BQ9NZH7 164 aa11.76□□□□□ -0.53
SHKBP1-219ENST00000599575 TRGV1A0A0A0MS02 117 aa11.75□□□□□ -0.53
SHKBP1-219ENST00000599575 XKRY2A2RUG3 117 aa11.75□□□□□ -0.53
SHKBP1-219ENST00000599575 ZNF727A8MUV8 499 aa11.75□□□□□ -0.53
SHKBP1-219ENST00000599575 MED14OSP0DP75 135 aa11.75□□□□□ -0.53
SHKBP1-219ENST00000599575 RPS20P60866 119 aaKnown RBP11.75□□□□□ -0.53
SHKBP1-219ENST00000599575 PRR27Q6MZM9 219 aa11.75□□□□□ -0.53
SHKBP1-219ENST00000599575 C9orf85Q96MD7 179 aa11.75□□□□□ -0.53
SHKBP1-219ENST00000599575 TRGV2A0A075B6R0 118 aa11.74□□□□□ -0.53
SHKBP1-219ENST00000599575 GAGE12BA1L429 117 aa11.74□□□□□ -0.53
SHKBP1-219ENST00000599575 C19orf71A6NCJ1 209 aa11.74□□□□□ -0.53
SHKBP1-219ENST00000599575 CIDEAO60543 219 aa11.74□□□□□ -0.53
SHKBP1-219ENST00000599575 GAGE7O76087 117 aa11.74□□□□□ -0.53
SHKBP1-219ENST00000599575 GAGE12FP0CL80 117 aa11.74□□□□□ -0.53
SHKBP1-219ENST00000599575 GAGE12GP0CL81 117 aa11.74□□□□□ -0.53
SHKBP1-219ENST00000599575 GAGE12IP0CL82 117 aa11.74□□□□□ -0.53
SHKBP1-219ENST00000599575 CEBPGP53567 150 aa11.74□□□□□ -0.53
SHKBP1-219ENST00000599575 OR5I1Q13606 314 aa11.74□□□□□ -0.53
SHKBP1-219ENST00000599575 Q6ZTI0 123 aa11.74□□□□□ -0.53
SHKBP1-219ENST00000599575 OCC1Q8TAD7 63 aa11.74□□□□□ -0.53
SHKBP1-219ENST00000599575 M0R036 132 aa11.73□□□□□ -0.53
SHKBP1-219ENST00000599575 P01737 135 aa11.73□□□□□ -0.53
SHKBP1-219ENST00000599575 RNASE3P12724 160 aaKnown RBP11.73□□□□□ -0.53
SHKBP1-219ENST00000599575 ZFAND6Q6FIF0 208 aa11.73□□□□□ -0.53
SHKBP1-219ENST00000599575 SLAQ13239 276 aa11.72□□□□□ -0.53
SHKBP1-219ENST00000599575 TMEM241Q24JQ0 296 aa11.72□□□□□ -0.53
SHKBP1-219ENST00000599575 ZNF876PQ49A33 203 aa11.72□□□□□ -0.53
SHKBP1-219ENST00000599575 SOHLH1Q5JUK2 328 aa11.72□□□□□ -0.53
SHKBP1-219ENST00000599575 UQCC3Q6UW78 93 aa11.72□□□□□ -0.53
SHKBP1-219ENST00000599575 FAM231DQ6ZW35 169 aa11.72□□□□□ -0.53
SHKBP1-219ENST00000599575 CSMD3Q7Z407 3707 aa11.71□□□□□ -0.53
SHKBP1-219ENST00000599575 PGPEP1LA6NFU8 196 aa11.71□□□□□ -0.53
SHKBP1-219ENST00000599575 LINC01551Q86U37 167 aa11.71□□□□□ -0.53
SHKBP1-219ENST00000599575 SYT8Q8NBV8 401 aa11.71□□□□□ -0.53
SHKBP1-219ENST00000599575 SCRT2Q9NQ03 307 aa11.71□□□□□ -0.53
SHKBP1-219ENST00000599575 C9JQL5 133 aa11.7□□□□□ -0.54
SHKBP1-219ENST00000599575 OR5AL1P0C617 328 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms