RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 Q8TAT8 98 aa11.46□□□□□ -0.57
SHKBP1-215ENST00000597649 NDFIP1Q9BT67 221 aa11.46□□□□□ -0.57
SHKBP1-215ENST00000597649 KRTAP1-5Q9BYS1 174 aa11.46□□□□□ -0.57
SHKBP1-215ENST00000597649 RBFOX3A6NFN3 312 aa11.45□□□□□ -0.58
SHKBP1-215ENST00000597649 FBLL1A6NHQ2 334 aaKnown RBP11.45□□□□□ -0.58
SHKBP1-215ENST00000597649 AKR1C3P42330 323 aa11.45□□□□□ -0.58
SHKBP1-215ENST00000597649 UBE2G1P62253 170 aa11.45□□□□□ -0.58
SHKBP1-215ENST00000597649 MEF2BQ02080 365 aaPredicted RBP11.45□□□□□ -0.58
SHKBP1-215ENST00000597649 SGK494Q96LW2 274 aa11.45□□□□□ -0.58
SHKBP1-215ENST00000597649 SRRM2Q9UQ35 2752 aaKnown RBP11.45□□□□□ -0.58
SHKBP1-215ENST00000597649 TRAV12-2A0A075B6T6 113 aa11.44□□□□□ -0.58
SHKBP1-215ENST00000597649 TRAV8-1A0A0A6YYK1 113 aa11.44□□□□□ -0.58
SHKBP1-215ENST00000597649 PDE6DO43924 150 aa11.44□□□□□ -0.58
SHKBP1-215ENST00000597649 INSP01308 110 aa11.44□□□□□ -0.58
SHKBP1-215ENST00000597649 GPX1P07203 203 aa11.44□□□□□ -0.58
SHKBP1-215ENST00000597649 NMBP08949 121 aa11.44□□□□□ -0.58
SHKBP1-215ENST00000597649 CCL18P55774 89 aa11.44□□□□□ -0.58
SHKBP1-215ENST00000597649 FLI1Q01543 452 aaPredicted RBP11.44□□□□□ -0.58
SHKBP1-215ENST00000597649 PRNTQ86SH4 94 aa11.44□□□□□ -0.58
SHKBP1-215ENST00000597649 TMEM75Q8N9X5 138 aa11.44□□□□□ -0.58
SHKBP1-215ENST00000597649 EIF5A2Q9GZV4 153 aaKnown RBP11.44□□□□□ -0.58
SHKBP1-215ENST00000597649 PSG8Q9UQ74 426 aa11.44□□□□□ -0.58
SHKBP1-215ENST00000597649 LENEPQ9Y5L5 61 aa11.44□□□□□ -0.58
SHKBP1-215ENST00000597649 TRAV34A0A0B4J273 112 aa11.43□□□□□ -0.58
SHKBP1-215ENST00000597649 TRBV7-9A0A0J9YWB2 115 aa11.43□□□□□ -0.58
SHKBP1-215ENST00000597649 SCO2A0A1W2PP80 73 aa11.43□□□□□ -0.58
SHKBP1-215ENST00000597649 S100A9P06702 114 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-215ENST00000597649 IFITM2Q01629 132 aa11.43□□□□□ -0.58
SHKBP1-215ENST00000597649 LINC00479Q96M42 142 aa11.43□□□□□ -0.58
SHKBP1-215ENST00000597649 Q9H8V8 135 aa11.43□□□□□ -0.58
SHKBP1-215ENST00000597649 CBY3A6NI87 242 aa11.42□□□□□ -0.58
SHKBP1-215ENST00000597649 ATP5G1P05496 136 aa11.42□□□□□ -0.58
SHKBP1-215ENST00000597649 CRISP2P16562 243 aa11.42□□□□□ -0.58
SHKBP1-215ENST00000597649 RNASE4P34096 147 aaKnown RBP11.42□□□□□ -0.58
SHKBP1-215ENST00000597649 TOR2AQ5JU69 321 aa11.42□□□□□ -0.58
SHKBP1-215ENST00000597649 SAPCD1Q5SSQ6 148 aa11.42□□□□□ -0.58
SHKBP1-215ENST00000597649 FMC1Q96HJ9 113 aa11.42□□□□□ -0.58
SHKBP1-215ENST00000597649 TREM1Q9NP99 234 aa11.42□□□□□ -0.58
SHKBP1-215ENST00000597649 MED9Q9NWA0 146 aa11.42□□□□□ -0.58
SHKBP1-215ENST00000597649 C7orf71A4D174 169 aa11.41□□□□□ -0.58
SHKBP1-215ENST00000597649 ZNF506Q5JVG8 444 aa11.41□□□□□ -0.58
SHKBP1-215ENST00000597649 FAM19A4Q96LR4 140 aa11.41□□□□□ -0.58
SHKBP1-215ENST00000597649 FAM210AQ96ND0 272 aa11.41□□□□□ -0.58
SHKBP1-215ENST00000597649 TRAV12-3A0A0B4J271 114 aa11.4□□□□□ -0.58
SHKBP1-215ENST00000597649 IGLV2-11P01706 119 aa11.4□□□□□ -0.58
SHKBP1-215ENST00000597649 TMEM183BQ1AE95 376 aa11.4□□□□□ -0.58
SHKBP1-215ENST00000597649 GFI1BQ5VTD9 330 aa11.4□□□□□ -0.58
SHKBP1-215ENST00000597649 TMEM256Q8N2U0 113 aa11.4□□□□□ -0.58
SHKBP1-215ENST00000597649 LINC01587Q99440 93 aa11.4□□□□□ -0.58
SHKBP1-215ENST00000597649 C20orf144Q9BQM9 153 aa11.4□□□□□ -0.58
SHKBP1-215ENST00000597649 KLLNB2CW77 178 aa11.39□□□□□ -0.59
SHKBP1-215ENST00000597649 BTN1A1Q13410 526 aa11.39□□□□□ -0.59
SHKBP1-215ENST00000597649 KIR3DS1Q14943 382 aa11.39□□□□□ -0.59
SHKBP1-215ENST00000597649 CLLU1Q5K131 121 aa11.39□□□□□ -0.59
SHKBP1-215ENST00000597649 Q86TA4 180 aa11.39□□□□□ -0.59
SHKBP1-215ENST00000597649 ZFAND2AQ8N6M9 145 aa11.39□□□□□ -0.59
SHKBP1-215ENST00000597649 C11orf52Q96A22 123 aa11.39□□□□□ -0.59
SHKBP1-215ENST00000597649 ZFP30Q9Y2G7 519 aa11.39□□□□□ -0.59
SHKBP1-215ENST00000597649 KLF12Q9Y4X4 402 aa11.39□□□□□ -0.59
SHKBP1-215ENST00000597649 TRBV6-1A0A0K0K1D8 114 aa11.38□□□□□ -0.59
SHKBP1-215ENST00000597649 CEBPGP53567 150 aa11.38□□□□□ -0.59
SHKBP1-215ENST00000597649 PEA15Q15121 130 aa11.38□□□□□ -0.59
SHKBP1-215ENST00000597649 SMUG1Q53HV7 270 aa11.38□□□□□ -0.59
SHKBP1-215ENST00000597649 TVP23CQ96ET8 276 aa11.38□□□□□ -0.59
SHKBP1-215ENST00000597649 TMEM250H0YL14 139 aa11.37□□□□□ -0.59
SHKBP1-215ENST00000597649 H7BYZ3 331 aa11.37□□□□□ -0.59
SHKBP1-215ENST00000597649 HTN1P15515 57 aa11.37□□□□□ -0.59
SHKBP1-215ENST00000597649 BTF3P20290 206 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-215ENST00000597649 RPL35P42766 123 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-215ENST00000597649 TAS2R60P59551 318 aa11.37□□□□□ -0.59
SHKBP1-215ENST00000597649 ESRGQ1W209 222 aa11.37□□□□□ -0.59
SHKBP1-215ENST00000597649 BAGE2Q86Y30 109 aa11.37□□□□□ -0.59
SHKBP1-215ENST00000597649 C8orf49Q96NF6 230 aa11.37□□□□□ -0.59
SHKBP1-215ENST00000597649 NOP10Q9NPE3 64 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-215ENST00000597649 EPM2AB3EWF7 344 aa11.36□□□□□ -0.59
SHKBP1-215ENST00000597649 GCGP01275 180 aa11.36□□□□□ -0.59
SHKBP1-215ENST00000597649 LTAP01374 205 aa11.36□□□□□ -0.59
SHKBP1-215ENST00000597649 FUSP35637 526 aaKnown RBP eCLIP11.36□□□□□ -0.59
SHKBP1-215ENST00000597649 PRR9Q5T870 116 aa11.36□□□□□ -0.59
SHKBP1-215ENST00000597649 TIMM8BQ9Y5J9 83 aaPredicted RBP11.36□□□□□ -0.59
SHKBP1-215ENST00000597649 FLG2Q5D862 2391 aaPredicted RBP11.36□□□□□ -0.59
SHKBP1-215ENST00000597649 TRAV26-1A0A087WT03 109 aa11.35□□□□□ -0.59
SHKBP1-215ENST00000597649 TRAV21A0A0B4J279 112 aa11.35□□□□□ -0.59
SHKBP1-215ENST00000597649 RGS13O14921 159 aa11.35□□□□□ -0.59
SHKBP1-215ENST00000597649 OR5I1Q13606 314 aa11.35□□□□□ -0.59
SHKBP1-215ENST00000597649 ZNF674Q2M3X9 581 aa11.35□□□□□ -0.59
SHKBP1-215ENST00000597649 PYGO2Q9BRQ0 406 aa11.35□□□□□ -0.59
SHKBP1-215ENST00000597649 DERL1Q9BUN8 251 aa11.35□□□□□ -0.59
SHKBP1-215ENST00000597649 A0A0J9YY99 117 aa11.34□□□□□ -0.59
SHKBP1-215ENST00000597649 RAB19A4D1S5 217 aa11.34□□□□□ -0.59
SHKBP1-215ENST00000597649 NDUFS6O75380 124 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-215ENST00000597649 ZNF324O75467 553 aaPredicted RBP11.34□□□□□ -0.59
SHKBP1-215ENST00000597649 INAFM2P0DMQ5 153 aa11.34□□□□□ -0.59
SHKBP1-215ENST00000597649 HOXA5P20719 270 aa11.34□□□□□ -0.59
SHKBP1-215ENST00000597649 GNG4P50150 75 aa11.34□□□□□ -0.59
SHKBP1-215ENST00000597649 TTC32Q5I0X7 151 aa11.34□□□□□ -0.59
SHKBP1-215ENST00000597649 Q6AWC8 147 aa11.34□□□□□ -0.59
SHKBP1-215ENST00000597649 TMEM183AQ8IXX5 376 aa11.34□□□□□ -0.59
SHKBP1-215ENST00000597649 RNASE8Q8TDE3 154 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-215ENST00000597649 C16orf74Q96GX8 76 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms