RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 SMIM2Q9BVW6 85 aa13.32□□□□□ -0.28
ARHGEF1-213ENST00000595897 SPANXB1Q9NS25 103 aaPredicted RBP13.32□□□□□ -0.28
ARHGEF1-213ENST00000595897 M0R381 172 aa13.32□□□□□ -0.28
ARHGEF1-213ENST00000595897 C16orf92Q96LL3 132 aa13.32□□□□□ -0.28
ARHGEF1-213ENST00000595897 PRSS47A8MTI9 375 aa13.32□□□□□ -0.28
ARHGEF1-213ENST00000595897 CHTOPQ9Y3Y2 248 aaKnown RBP13.32□□□□□ -0.28
ARHGEF1-213ENST00000595897 CYSLTR1Q9Y271 337 aa13.31□□□□□ -0.28
ARHGEF1-213ENST00000595897 ASH1LQ9NR48 2969 aaKnown RBP13.31□□□□□ -0.28
ARHGEF1-213ENST00000595897 SPRY2O43597 315 aa13.31□□□□□ -0.28
ARHGEF1-213ENST00000595897 CD300EQ496F6 205 aaPredicted RBP13.31□□□□□ -0.28
ARHGEF1-213ENST00000595897 GAGE13Q4V321 117 aa13.31□□□□□ -0.28
ARHGEF1-213ENST00000595897 C1orf122Q6ZSJ8 110 aa13.31□□□□□ -0.28
ARHGEF1-213ENST00000595897 MRAP2Q96G30 205 aa13.31□□□□□ -0.28
ARHGEF1-213ENST00000595897 MYMXA0A1B0GTQ4 84 aa13.3□□□□□ -0.28
ARHGEF1-213ENST00000595897 GAGE12HA6NDE8 117 aa13.3□□□□□ -0.28
ARHGEF1-213ENST00000595897 S100A4P26447 101 aaKnown RBP13.3□□□□□ -0.28
ARHGEF1-213ENST00000595897 ZFP36P26651 326 aaKnown RBP13.3□□□□□ -0.28
ARHGEF1-213ENST00000595897 LCNL1Q6ZST4 164 aa13.3□□□□□ -0.28
ARHGEF1-213ENST00000595897 EEF1AKMT3Q96AZ1 226 aa13.3□□□□□ -0.28
ARHGEF1-213ENST00000595897 RRN3P1Q2M238 152 aa13.3□□□□□ -0.28
ARHGEF1-213ENST00000595897 ORMDL2Q53FV1 153 aa13.3□□□□□ -0.28
ARHGEF1-213ENST00000595897 C9orf47Q6ZRZ4 202 aa13.3□□□□□ -0.28
ARHGEF1-213ENST00000595897 SUMO2P61956 95 aaKnown RBP13.29□□□□□ -0.28
ARHGEF1-213ENST00000595897 IGHV4-4A0A075B6R2 117 aa13.29□□□□□ -0.28
ARHGEF1-213ENST00000595897 LINC01548A6NM66 108 aa13.29□□□□□ -0.28
ARHGEF1-213ENST00000595897 CCL21O00585 134 aa13.29□□□□□ -0.28
ARHGEF1-213ENST00000595897 MRPL53Q96EL3 112 aaKnown RBP13.29□□□□□ -0.28
ARHGEF1-213ENST00000595897 RAXQ9Y2V3 346 aa13.29□□□□□ -0.28
ARHGEF1-213ENST00000595897 TRAV12-1A0A0B4J245 112 aa13.28□□□□□ -0.28
ARHGEF1-213ENST00000595897 CIDEAO60543 219 aa13.28□□□□□ -0.28
ARHGEF1-213ENST00000595897 PRR9Q5T870 116 aa13.28□□□□□ -0.28
ARHGEF1-213ENST00000595897 TRBV7-3A0A075B6L6 115 aa13.27□□□□□ -0.28
ARHGEF1-213ENST00000595897 IGF1P05019 195 aa13.27□□□□□ -0.28
ARHGEF1-213ENST00000595897 MGPP08493 103 aa13.27□□□□□ -0.29
ARHGEF1-213ENST00000595897 SCGB1D4Q6XE38 83 aa13.27□□□□□ -0.29
ARHGEF1-213ENST00000595897 C14orf178Q8N769 122 aaPredicted RBP13.27□□□□□ -0.29
ARHGEF1-213ENST00000595897 SPAG8Q99932 426 aaPredicted RBP13.27□□□□□ -0.29
ARHGEF1-213ENST00000595897 HOXA3O43365 443 aaPredicted RBP13.26□□□□□ -0.29
ARHGEF1-213ENST00000595897 RPL39LQ96EH5 51 aaKnown RBP13.26□□□□□ -0.29
ARHGEF1-213ENST00000595897 PHLDA3Q9Y5J5 127 aa13.26□□□□□ -0.29
ARHGEF1-213ENST00000595897 TRBV7-1A0A0A6YYK4 115 aa13.26□□□□□ -0.29
ARHGEF1-213ENST00000595897 TOMM6Q96B49 74 aa13.26□□□□□ -0.29
ARHGEF1-213ENST00000595897 A0A1B0GWB2 263 aa13.26□□□□□ -0.29
ARHGEF1-213ENST00000595897 MRPL16Q9NX20 251 aaKnown RBP13.26□□□□□ -0.29
ARHGEF1-213ENST00000595897 SAA4P35542 130 aa13.25□□□□□ -0.29
ARHGEF1-213ENST00000595897 CLEC2AQ6UVW9 174 aa13.25□□□□□ -0.29
ARHGEF1-213ENST00000595897 C2orf66Q6UXQ4 117 aa13.25□□□□□ -0.29
ARHGEF1-213ENST00000595897 RASL10AQ92737 203 aa13.25□□□□□ -0.29
ARHGEF1-213ENST00000595897 PGPEP1Q9NXJ5 209 aa13.25□□□□□ -0.29
ARHGEF1-213ENST00000595897 PTPRQQ9UMZ3 2332 aa13.25□□□□□ -0.29
ARHGEF1-213ENST00000595897 ATP5G2Q06055 141 aa13.25□□□□□ -0.29
ARHGEF1-213ENST00000595897 CDSNQ15517 529 aa13.25□□□□□ -0.29
ARHGEF1-213ENST00000595897 FBXL19-AS1Q494R0 122 aa13.25□□□□□ -0.29
ARHGEF1-213ENST00000595897 NEXN-AS1Q8NBZ9 246 aa13.25□□□□□ -0.29
ARHGEF1-213ENST00000595897 PRADC1Q9BSG0 188 aa13.25□□□□□ -0.29
ARHGEF1-213ENST00000595897 AKAP6Q13023 2319 aa13.24□□□□□ -0.29
ARHGEF1-213ENST00000595897 LGALS1P09382 135 aaKnown RBP13.24□□□□□ -0.29
ARHGEF1-213ENST00000595897 SRSF9Q13242 221 aaKnown RBP eCLIP13.24□□□□□ -0.29
ARHGEF1-213ENST00000595897 SIRPDQ9H106 197 aa13.24□□□□□ -0.29
ARHGEF1-213ENST00000595897 DPH3P1Q9H4G8 78 aa13.24□□□□□ -0.29
ARHGEF1-213ENST00000595897 ZNF815PA8K554 130 aa13.24□□□□□ -0.29
ARHGEF1-213ENST00000595897 SLC25A16P16260 332 aa13.23□□□□□ -0.29
ARHGEF1-213ENST00000595897 ASIPP42127 132 aa13.23□□□□□ -0.29
ARHGEF1-213ENST00000595897 C20orf78Q9BR46 151 aa13.23□□□□□ -0.29
ARHGEF1-213ENST00000595897 LINC00527Q9UJ94 153 aa13.23□□□□□ -0.29
ARHGEF1-213ENST00000595897 SCGB1A1P11684 91 aa13.23□□□□□ -0.29
ARHGEF1-213ENST00000595897 INSL3P51460 131 aa13.23□□□□□ -0.29
ARHGEF1-213ENST00000595897 UBE2E1P51965 193 aa13.23□□□□□ -0.29
ARHGEF1-213ENST00000595897 SFTA2Q6UW10 78 aa13.23□□□□□ -0.29
ARHGEF1-213ENST00000595897 C9orf139Q6ZV77 190 aa13.23□□□□□ -0.29
ARHGEF1-213ENST00000595897 OR10J6PQ8NGY7 276 aa13.23□□□□□ -0.29
ARHGEF1-213ENST00000595897 BAALCQ8WXS3 180 aa13.23□□□□□ -0.29
ARHGEF1-213ENST00000595897 TRAV21A0A0B4J279 112 aa13.23□□□□□ -0.29
ARHGEF1-213ENST00000595897 PRSS29PA6NIE9 313 aa13.23□□□□□ -0.29
ARHGEF1-213ENST00000595897 C11orf71Q6IPW1 123 aa13.23□□□□□ -0.29
ARHGEF1-213ENST00000595897 C20orf173Q96LM9 149 aa13.23□□□□□ -0.29
ARHGEF1-213ENST00000595897 RPL11P62913 178 aaKnown RBP13.22□□□□□ -0.29
ARHGEF1-213ENST00000595897 TMEM238LA0A1B0GVL6 79 aa13.22□□□□□ -0.29
ARHGEF1-213ENST00000595897 A6NJY4 79 aa13.22□□□□□ -0.29
ARHGEF1-213ENST00000595897 NDUFS8O00217 210 aa13.22□□□□□ -0.29
ARHGEF1-213ENST00000595897 APOMO95445 188 aa13.22□□□□□ -0.29
ARHGEF1-213ENST00000595897 DEFB1P60022 68 aa13.22□□□□□ -0.29
ARHGEF1-213ENST00000595897 MORN3Q6PF18 240 aaPredicted RBP13.21□□□□□ -0.29
ARHGEF1-213ENST00000595897 LENEPQ9Y5L5 61 aa13.21□□□□□ -0.29
ARHGEF1-213ENST00000595897 U3KQE9 123 aa13.21□□□□□ -0.29
ARHGEF1-213ENST00000595897 LOC107984156A0A0G2JMH3 177 aa13.21□□□□□ -0.29
ARHGEF1-213ENST00000595897 LINC01619G3V211 115 aa13.21□□□□□ -0.29
ARHGEF1-213ENST00000595897 TMEM219Q86XT9 240 aa13.21□□□□□ -0.29
ARHGEF1-213ENST00000595897 ARL17AQ8IVW1 177 aa13.21□□□□□ -0.29
ARHGEF1-213ENST00000595897 LINC00477Q96M19 166 aa13.21□□□□□ -0.29
ARHGEF1-213ENST00000595897 SPATA25Q9BR10 227 aa13.21□□□□□ -0.29
ARHGEF1-213ENST00000595897 PRO0461Q9UI25 63 aa13.21□□□□□ -0.29
ARHGEF1-213ENST00000595897 RNASE4P34096 147 aaKnown RBP13.2□□□□□ -0.3
ARHGEF1-213ENST00000595897 ANXA2RQ3ZCQ2 193 aa13.2□□□□□ -0.3
ARHGEF1-213ENST00000595897 HRNRQ86YZ3 2850 aaPredicted RBP13.2□□□□□ -0.3
ARHGEF1-213ENST00000595897 LINC01549A6NIU2 74 aa13.2□□□□□ -0.3
ARHGEF1-213ENST00000595897 ZFAND2AQ8N6M9 145 aa13.2□□□□□ -0.3
ARHGEF1-213ENST00000595897 DEFB104AQ8WTQ1 72 aa13.2□□□□□ -0.3
ARHGEF1-213ENST00000595897 GLMPQ8WWB7 406 aa13.2□□□□□ -0.3
ARHGEF1-213ENST00000595897 IGKV3-7A0A075B6H7 116 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms