RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 TMEM263Q8WUH6 116 aaKnown RBP3.85□□□□□ -1.79
DNMT1-220ENST00000589351 UPK3BQ9BT76 320 aa3.85□□□□□ -1.79
DNMT1-220ENST00000589351 SLC25A39Q9BZJ4 359 aaPredicted RBP3.85□□□□□ -1.79
DNMT1-220ENST00000589351 NOP10Q9NPE3 64 aaKnown RBP3.85□□□□□ -1.79
DNMT1-220ENST00000589351 MCUBQ9NWR8 336 aa3.85□□□□□ -1.79
DNMT1-220ENST00000589351 ZNF586Q9NXT0 402 aa3.85□□□□□ -1.79
DNMT1-220ENST00000589351 HIGD1AQ9Y241 93 aa3.85□□□□□ -1.79
DNMT1-220ENST00000589351 TINCRA0A1B0GVN0 87 aa3.84□□□□□ -1.79
DNMT1-220ENST00000589351 SYNGR2O43760 224 aa3.84□□□□□ -1.79
DNMT1-220ENST00000589351 PRM2P04554 102 aa3.84□□□□□ -1.79
DNMT1-220ENST00000589351 IL5P05113 134 aa3.84□□□□□ -1.79
DNMT1-220ENST00000589351 OR5G3P0C626 314 aa3.84□□□□□ -1.79
DNMT1-220ENST00000589351 NBEAP1P0C6P0 100 aa3.84□□□□□ -1.79
DNMT1-220ENST00000589351 FAUP35544 74 aaKnown RBP3.84□□□□□ -1.79
DNMT1-220ENST00000589351 ERVFC1-1P60608 527 aa3.84□□□□□ -1.79
DNMT1-220ENST00000589351 SELENOTP62341 195 aa3.84□□□□□ -1.79
DNMT1-220ENST00000589351 ESRGQ1W209 222 aa3.84□□□□□ -1.79
DNMT1-220ENST00000589351 BAP18Q8IXM2 172 aa3.84□□□□□ -1.79
DNMT1-220ENST00000589351 LYPD1Q8N2G4 141 aa3.84□□□□□ -1.79
DNMT1-220ENST00000589351 RNF182Q8N6D2 247 aa3.84□□□□□ -1.79
DNMT1-220ENST00000589351 OR8A1Q8NGG7 326 aa3.84□□□□□ -1.79
DNMT1-220ENST00000589351 OR51S1Q8NGJ8 323 aa3.84□□□□□ -1.79
DNMT1-220ENST00000589351 URB1-AS1Q96HZ7 61 aa3.84□□□□□ -1.79
DNMT1-220ENST00000589351 MRPS26Q9BYN8 205 aaKnown RBP3.84□□□□□ -1.79
DNMT1-220ENST00000589351 ARL6Q9H0F7 186 aa3.84□□□□□ -1.79
DNMT1-220ENST00000589351 MRPS16Q9Y3D3 137 aaKnown RBP3.84□□□□□ -1.79
DNMT1-220ENST00000589351 HSPG2P98160 4391 aa3.84□□□□□ -1.8
DNMT1-220ENST00000589351 TRGV2A0A075B6R0 118 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 IGKV1OR2-108A0A075B7D4 117 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 A0A0J9YY99 117 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 PLAC8L1A1L4L8 177 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 HYPMO75409 117 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 GAGE7O76087 117 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 GAGE12FP0CL80 117 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 GAGE12GP0CL81 117 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 GAGE12IP0CL82 117 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 IAPPP10997 89 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 SLC25A6P12236 298 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 CXCL3P19876 107 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 CRYBA4P53673 196 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 RPL24P83731 157 aaKnown RBP3.83□□□□□ -1.8
DNMT1-220ENST00000589351 TMEM128Q5BJH2 165 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 SPANXN5Q5MJ07 72 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 PXDC1Q5TGL8 231 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 FAAP20Q6NZ36 180 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 MRPL52Q86TS9 123 aaKnown RBP3.83□□□□□ -1.8
DNMT1-220ENST00000589351 CBLN2Q8IUK8 224 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 SMIM4Q8WVI0 70 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 RPUSD4Q96CM3 377 aaKnown RBP3.83□□□□□ -1.8
DNMT1-220ENST00000589351 DIRAS2Q96HU8 199 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 SLC50A1Q9BRV3 221 aa3.83□□□□□ -1.8
DNMT1-220ENST00000589351 RSL24D1Q9UHA3 163 aaKnown RBP3.83□□□□□ -1.8
DNMT1-220ENST00000589351 ABCA13Q86UQ4 5058 aa3.82□□□□□ -1.8
DNMT1-220ENST00000589351 TRAV8-2A0A0B4J237 113 aa3.82□□□□□ -1.8
DNMT1-220ENST00000589351 H3BRN7 92 aa3.82□□□□□ -1.8
DNMT1-220ENST00000589351 K7EP13 123 aa3.82□□□□□ -1.8
DNMT1-220ENST00000589351 PITX3O75364 302 aa3.82□□□□□ -1.8
DNMT1-220ENST00000589351 LINC00869P0C866 280 aa3.82□□□□□ -1.8
DNMT1-220ENST00000589351 CXCL2P19875 107 aa3.82□□□□□ -1.8
DNMT1-220ENST00000589351 S100A1P23297 94 aa3.82□□□□□ -1.8
DNMT1-220ENST00000589351 GATA2P23769 480 aaPredicted RBP3.82□□□□□ -1.8
DNMT1-220ENST00000589351 LINC00315P59091 139 aa3.82□□□□□ -1.8
DNMT1-220ENST00000589351 RBX1P62877 108 aa3.82□□□□□ -1.8
DNMT1-220ENST00000589351 LCN15Q6UWW0 184 aa3.82□□□□□ -1.8
DNMT1-220ENST00000589351 CYP2G1PQ6ZSU1 146 aa3.82□□□□□ -1.8
DNMT1-220ENST00000589351 BPIFA4PQ86YQ2 179 aa3.82□□□□□ -1.8
DNMT1-220ENST00000589351 C2orf48Q96LS8 159 aa3.82□□□□□ -1.8
DNMT1-220ENST00000589351 FAM218AQ96MZ4 157 aa3.82□□□□□ -1.8
DNMT1-220ENST00000589351 PYGO2Q9BRQ0 406 aa3.82□□□□□ -1.8
DNMT1-220ENST00000589351 SHANK2-AS3Q9BTD1 123 aa3.82□□□□□ -1.8
DNMT1-220ENST00000589351 NPVFQ9HCQ7 196 aa3.82□□□□□ -1.8
DNMT1-220ENST00000589351 PXMP4Q9Y6I8 212 aa3.82□□□□□ -1.8
DNMT1-220ENST00000589351 IGLV9-49A0A0B4J1Y8 123 aa3.81□□□□□ -1.8
DNMT1-220ENST00000589351 PMS2P5A8MQ11 134 aa3.81□□□□□ -1.8
DNMT1-220ENST00000589351 GCGP01275 180 aa3.81□□□□□ -1.8
DNMT1-220ENST00000589351 TYMSP04818 313 aa3.81□□□□□ -1.8
DNMT1-220ENST00000589351 HIST1H1EP10412 219 aaKnown RBP3.81□□□□□ -1.8
DNMT1-220ENST00000589351 CD164Q04900 197 aa3.81□□□□□ -1.8
DNMT1-220ENST00000589351 ARL16Q0P5N6 197 aa3.81□□□□□ -1.8
DNMT1-220ENST00000589351 GAGE1Q13065 139 aa3.81□□□□□ -1.8
DNMT1-220ENST00000589351 GAGE4Q13068 117 aa3.81□□□□□ -1.8
DNMT1-220ENST00000589351 DAZ2Q13117 558 aaKnown RBP3.81□□□□□ -1.8
DNMT1-220ENST00000589351 C4orf26Q17RF5 130 aa3.81□□□□□ -1.8
DNMT1-220ENST00000589351 Q5VSD8 79 aa3.81□□□□□ -1.8
DNMT1-220ENST00000589351 TMED4Q7Z7H5 227 aa3.81□□□□□ -1.8
DNMT1-220ENST00000589351 LINC00612Q8N6U2 182 aa3.81□□□□□ -1.8
DNMT1-220ENST00000589351 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.81□□□□□ -1.8
DNMT1-220ENST00000589351 HSD17B11Q8NBQ5 300 aa3.81□□□□□ -1.8
DNMT1-220ENST00000589351 PSENENQ9NZ42 101 aa3.81□□□□□ -1.8
DNMT1-220ENST00000589351 ALG5Q9Y673 324 aa3.81□□□□□ -1.8
DNMT1-220ENST00000589351 ICOSQ9Y6W8 199 aa3.81□□□□□ -1.8
DNMT1-220ENST00000589351 A0A096LPF7 62 aa3.8□□□□□ -1.8
DNMT1-220ENST00000589351 TRAV12-3A0A0B4J271 114 aa3.8□□□□□ -1.8
DNMT1-220ENST00000589351 FNDC10F2Z333 226 aa3.8□□□□□ -1.8
DNMT1-220ENST00000589351 SMKR1H3BMG3 65 aa3.8□□□□□ -1.8
DNMT1-220ENST00000589351 SLC25A5P05141 298 aaKnown RBP3.8□□□□□ -1.8
DNMT1-220ENST00000589351 EVI2AP22794 236 aa3.8□□□□□ -1.8
DNMT1-220ENST00000589351 NDUFA5Q16718 116 aa3.8□□□□□ -1.8
DNMT1-220ENST00000589351 LINC00305Q7Z4B0 112 aa3.8□□□□□ -1.8
DNMT1-220ENST00000589351 OR10P1Q8NGE3 313 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms