RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 ZNF688P0C7X2 276 aa6.59□□□□□ -1.35
SMAD4-206ENST00000588860 CD28P10747 220 aa6.59□□□□□ -1.35
SMAD4-206ENST00000588860 CTRLP40313 264 aa6.59□□□□□ -1.35
SMAD4-206ENST00000588860 HILS1P60008 231 aa6.59□□□□□ -1.35
SMAD4-206ENST00000588860 OR10J3Q5JRS4 329 aa6.59□□□□□ -1.35
SMAD4-206ENST00000588860 PSMG4Q5JS54 123 aa6.59□□□□□ -1.35
SMAD4-206ENST00000588860 PRR9Q5T870 116 aa6.59□□□□□ -1.35
SMAD4-206ENST00000588860 TMEM18Q96B42 140 aa6.59□□□□□ -1.35
SMAD4-206ENST00000588860 C16orf95Q9H693 158 aa6.59□□□□□ -1.35
SMAD4-206ENST00000588860 PEMTQ9UBM1 199 aa6.59□□□□□ -1.35
SMAD4-206ENST00000588860 LENEPQ9Y5L5 61 aa6.59□□□□□ -1.35
SMAD4-206ENST00000588860 CUBNO60494 3623 aa6.58□□□□□ -1.36
SMAD4-206ENST00000588860 WNK1Q9H4A3 2382 aa6.58□□□□□ -1.36
SMAD4-206ENST00000588860 LOC102724200A0A096LPH7 203 aaPredicted RBP6.58□□□□□ -1.36
SMAD4-206ENST00000588860 MUC21A0A0G2JKD1 596 aa6.58□□□□□ -1.36
SMAD4-206ENST00000588860 MUC21A0A140T8X8 626 aa6.58□□□□□ -1.36
SMAD4-206ENST00000588860 IGLC6P0CF74 106 aa6.58□□□□□ -1.36
SMAD4-206ENST00000588860 LINC00310P59036 64 aa6.58□□□□□ -1.36
SMAD4-206ENST00000588860 SSTP61278 116 aa6.58□□□□□ -1.36
SMAD4-206ENST00000588860 SNRPD3P62318 126 aaKnown RBP6.58□□□□□ -1.36
SMAD4-206ENST00000588860 IQCJQ1A5X6 159 aa6.58□□□□□ -1.36
SMAD4-206ENST00000588860 MUC21Q5SSG8 566 aa6.58□□□□□ -1.36
SMAD4-206ENST00000588860 ADAMTSL5Q6ZMM2 481 aa6.58□□□□□ -1.36
SMAD4-206ENST00000588860 C11orf44Q8N8P7 122 aa6.58□□□□□ -1.36
SMAD4-206ENST00000588860 GATD1Q8NB37 220 aa6.58□□□□□ -1.36
SMAD4-206ENST00000588860 OR9G4Q8NGQ1 327 aa6.58□□□□□ -1.36
SMAD4-206ENST00000588860 TMEM158Q8WZ71 300 aa6.58□□□□□ -1.36
SMAD4-206ENST00000588860 JMJD8Q96S16 334 aa6.58□□□□□ -1.36
SMAD4-206ENST00000588860 ALKBH7Q9BT30 221 aaPredicted RBP6.58□□□□□ -1.36
SMAD4-206ENST00000588860 ANK3Q12955 4377 aaKnown RBP6.57□□□□□ -1.36
SMAD4-206ENST00000588860 PKD1L1Q8TDX9 2849 aa6.57□□□□□ -1.36
SMAD4-206ENST00000588860 IGKV3D-20A0A0C4DH25 116 aa6.57□□□□□ -1.36
SMAD4-206ENST00000588860 GPX1P07203 203 aa6.57□□□□□ -1.36
SMAD4-206ENST00000588860 ESDP10768 282 aa6.57□□□□□ -1.36
SMAD4-206ENST00000588860 RNASE4P34096 147 aaKnown RBP6.57□□□□□ -1.36
SMAD4-206ENST00000588860 PAFAH1B2P68402 229 aa6.57□□□□□ -1.36
SMAD4-206ENST00000588860 Q6ZQT7 251 aa6.57□□□□□ -1.36
SMAD4-206ENST00000588860 ZFAND2AQ8N6M9 145 aa6.57□□□□□ -1.36
SMAD4-206ENST00000588860 LINC01006Q8NI28 216 aa6.57□□□□□ -1.36
SMAD4-206ENST00000588860 C18orf32Q8TCD1 76 aa6.57□□□□□ -1.36
SMAD4-206ENST00000588860 DYNLRB2Q8TF09 96 aa6.57□□□□□ -1.36
SMAD4-206ENST00000588860 DLX4Q92988 240 aaPredicted RBP6.57□□□□□ -1.36
SMAD4-206ENST00000588860 RAX2Q96IS3 184 aa6.57□□□□□ -1.36
SMAD4-206ENST00000588860 KCNS1Q96KK3 526 aa6.57□□□□□ -1.36
SMAD4-206ENST00000588860 FAM19A4Q96LR4 140 aa6.57□□□□□ -1.36
SMAD4-206ENST00000588860 C11orf21Q9P2W6 132 aa6.57□□□□□ -1.36
SMAD4-206ENST00000588860 NAGKQ9UJ70 344 aa6.57□□□□□ -1.36
SMAD4-206ENST00000588860 SORL1Q92673 2214 aa6.56□□□□□ -1.36
SMAD4-206ENST00000588860 TRAV21A0A0B4J279 112 aa6.56□□□□□ -1.36
SMAD4-206ENST00000588860 TRBV7-9A0A0J9YWB2 115 aa6.56□□□□□ -1.36
SMAD4-206ENST00000588860 NDUFA7O95182 113 aa6.56□□□□□ -1.36
SMAD4-206ENST00000588860 CSN3P07498 182 aa6.56□□□□□ -1.36
SMAD4-206ENST00000588860 LEPP41159 167 aa6.56□□□□□ -1.36
SMAD4-206ENST00000588860 TWIST1Q15672 202 aa6.56□□□□□ -1.36
SMAD4-206ENST00000588860 PYY3Q5JQD4 70 aa6.56□□□□□ -1.36
SMAD4-206ENST00000588860 EBLN2Q6P2I7 272 aa6.56□□□□□ -1.36
SMAD4-206ENST00000588860 RNASEKQ6P5S7 137 aaKnown RBP6.56□□□□□ -1.36
SMAD4-206ENST00000588860 ZNF575Q86XF7 245 aa6.56□□□□□ -1.36
SMAD4-206ENST00000588860 WFDC12Q8WWY7 111 aa6.56□□□□□ -1.36
SMAD4-206ENST00000588860 RCHY1Q96PM5 261 aa6.56□□□□□ -1.36
SMAD4-206ENST00000588860 CITED2Q99967 270 aaPredicted RBP6.56□□□□□ -1.36
SMAD4-206ENST00000588860 SAMD10Q9BYL1 202 aa6.56□□□□□ -1.36
SMAD4-206ENST00000588860 TSSC4Q9Y5U2 329 aaPredicted RBP6.56□□□□□ -1.36
SMAD4-206ENST00000588860 A0A0J9YX75 114 aa6.55□□□□□ -1.36
SMAD4-206ENST00000588860 PCP4L1A6NKN8 68 aa6.55□□□□□ -1.36
SMAD4-206ENST00000588860 CCL24O00175 119 aa6.55□□□□□ -1.36
SMAD4-206ENST00000588860 PMCHP20382 165 aa6.55□□□□□ -1.36
SMAD4-206ENST00000588860 ZNF493Q6ZR52 646 aa6.55□□□□□ -1.36
SMAD4-206ENST00000588860 NIT2Q9NQR4 276 aa6.55□□□□□ -1.36
SMAD4-206ENST00000588860 TIMM8BQ9Y5J9 83 aaPredicted RBP6.55□□□□□ -1.36
SMAD4-206ENST00000588860 TGP01266 2768 aa6.55□□□□□ -1.36
SMAD4-206ENST00000588860 TRAV2A0A0B4J234 112 aa6.54□□□□□ -1.36
SMAD4-206ENST00000588860 H3BVH4 76 aa6.54□□□□□ -1.36
SMAD4-206ENST00000588860 CRLF1O75462 422 aa6.54□□□□□ -1.36
SMAD4-206ENST00000588860 DUSP14O95147 198 aaKnown RBP6.54□□□□□ -1.36
SMAD4-206ENST00000588860 IGKV3-20P01619 116 aa6.54□□□□□ -1.36
SMAD4-206ENST00000588860 NTF3P20783 257 aa6.54□□□□□ -1.36
SMAD4-206ENST00000588860 FHL3Q13643 280 aa6.54□□□□□ -1.36
SMAD4-206ENST00000588860 KIR3DS1Q14943 382 aa6.54□□□□□ -1.36
SMAD4-206ENST00000588860 CDPF1Q6NVV7 123 aa6.54□□□□□ -1.36
SMAD4-206ENST00000588860 APRG1Q8IVJ8 170 aa6.54□□□□□ -1.36
SMAD4-206ENST00000588860 AMN1Q8IY45 258 aa6.54□□□□□ -1.36
SMAD4-206ENST00000588860 TMEM61Q8N0U2 210 aa6.54□□□□□ -1.36
SMAD4-206ENST00000588860 ODF3Q96PU9 254 aa6.54□□□□□ -1.36
SMAD4-206ENST00000588860 MSRB1Q9NZV6 116 aa6.54□□□□□ -1.36
SMAD4-206ENST00000588860 RNF114Q9Y508 228 aa6.54□□□□□ -1.36
SMAD4-206ENST00000588860 NOTCH1P46531 2555 aa6.54□□□□□ -1.36
SMAD4-206ENST00000588860 MUC4Q99102 2169 aa6.53□□□□□ -1.36
SMAD4-206ENST00000588860 C7orf71A4D174 169 aa6.53□□□□□ -1.36
SMAD4-206ENST00000588860 KLLNB2CW77 178 aa6.53□□□□□ -1.36
SMAD4-206ENST00000588860 ZNF324O75467 553 aaPredicted RBP6.53□□□□□ -1.36
SMAD4-206ENST00000588860 ASIPP42127 132 aa6.53□□□□□ -1.36
SMAD4-206ENST00000588860 AMTP48728 403 aa6.53□□□□□ -1.36
SMAD4-206ENST00000588860 CACNG7P62955 275 aa6.53□□□□□ -1.36
SMAD4-206ENST00000588860 JOSD1Q15040 202 aaPredicted RBP6.53□□□□□ -1.36
SMAD4-206ENST00000588860 DEFB114Q30KQ6 69 aa6.53□□□□□ -1.36
SMAD4-206ENST00000588860 ANXA2RQ3ZCQ2 193 aa6.53□□□□□ -1.36
SMAD4-206ENST00000588860 MRPL51Q4U2R6 128 aaKnown RBP6.53□□□□□ -1.36
SMAD4-206ENST00000588860 FAM104BQ5XKR9 115 aa6.53□□□□□ -1.36
SMAD4-206ENST00000588860 FOXI2Q6ZQN5 318 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms