RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 NAA38Q9BRA0 125 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP3-237ENST00000585163 TTTY13Q9BZ97 58 aa10.83□□□□□ -0.68
CDK5RAP3-237ENST00000585163 LENEPQ9Y5L5 61 aa10.83□□□□□ -0.68
CDK5RAP3-237ENST00000585163 TRAV41A0A0B4J266 112 aa10.83□□□□□ -0.68
CDK5RAP3-237ENST00000585163 FAM223BA6NKX1 122 aa10.83□□□□□ -0.68
CDK5RAP3-237ENST00000585163 PRR9Q5T870 116 aa10.83□□□□□ -0.68
CDK5RAP3-237ENST00000585163 C9orf139Q6ZV77 190 aa10.83□□□□□ -0.68
CDK5RAP3-237ENST00000585163 TMEM219Q86XT9 240 aa10.83□□□□□ -0.68
CDK5RAP3-237ENST00000585163 FAM223AQ8IWN6 122 aa10.83□□□□□ -0.68
CDK5RAP3-237ENST00000585163 MYOZ3Q8TDC0 251 aa10.83□□□□□ -0.68
CDK5RAP3-237ENST00000585163 ITLN2Q8WWU7 325 aaPredicted RBP10.83□□□□□ -0.68
CDK5RAP3-237ENST00000585163 GTSCR1Q86UQ5 136 aa10.82□□□□□ -0.68
CDK5RAP3-237ENST00000585163 A0A1W2PPM0 123 aa10.82□□□□□ -0.68
CDK5RAP3-237ENST00000585163 H3BVH4 76 aa10.82□□□□□ -0.68
CDK5RAP3-237ENST00000585163 HLA-DRB4P13762 266 aa10.82□□□□□ -0.68
CDK5RAP3-237ENST00000585163 SRSF1Q07955 248 aaKnown RBP eCLIP10.82□□□□□ -0.684e-7■■□□□ 14.4
CDK5RAP3-237ENST00000585163 C20orf173Q96LM9 149 aa10.82□□□□□ -0.68
CDK5RAP3-237ENST00000585163 CHAC1Q9BUX1 264 aa10.82□□□□□ -0.68
CDK5RAP3-237ENST00000585163 MEGF9Q9H1U4 602 aa10.82□□□□□ -0.68
CDK5RAP3-237ENST00000585163 MOB4Q9Y3A3 225 aa10.82□□□□□ -0.68
CDK5RAP3-237ENST00000585163 HLA-DRB4X5D2U9 266 aa10.82□□□□□ -0.68
CDK5RAP3-237ENST00000585163 TRBV25-1A0A075B6N4 114 aa10.81□□□□□ -0.68
CDK5RAP3-237ENST00000585163 TRAV40A0A0B4J280 105 aa10.81□□□□□ -0.68
CDK5RAP3-237ENST00000585163 CRIP2P52943 208 aaPredicted RBP10.81□□□□□ -0.68
CDK5RAP3-237ENST00000585163 TM4SF20Q53R12 229 aa10.81□□□□□ -0.68
CDK5RAP3-237ENST00000585163 MRAP2Q96G30 205 aa10.81□□□□□ -0.68
CDK5RAP3-237ENST00000585163 TMEM160Q9NX00 188 aa10.81□□□□□ -0.68
CDK5RAP3-237ENST00000585163 MRPL35Q9NZE8 188 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-237ENST00000585163 COL6A6A6NMZ7 2263 aa10.81□□□□□ -0.68
CDK5RAP3-237ENST00000585163 SMIM13P0DJ93 91 aa10.81□□□□□ -0.68
CDK5RAP3-237ENST00000585163 GCSHP23434 173 aa10.81□□□□□ -0.68
CDK5RAP3-237ENST00000585163 FXYD2P54710 66 aa10.81□□□□□ -0.68
CDK5RAP3-237ENST00000585163 ZFHX3Q15911 3703 aa10.81□□□□□ -0.68
CDK5RAP3-237ENST00000585163 ARL3P36405 182 aa10.8□□□□□ -0.68
CDK5RAP3-237ENST00000585163 LINC00477Q96M19 166 aa10.8□□□□□ -0.68
CDK5RAP3-237ENST00000585163 LINC00527Q9UJ94 153 aa10.8□□□□□ -0.68
CDK5RAP3-237ENST00000585163 A0A087WX48 190 aa10.8□□□□□ -0.68
CDK5RAP3-237ENST00000585163 IGF1P05019 195 aa10.8□□□□□ -0.68
CDK5RAP3-237ENST00000585163 GPHB5Q86YW7 130 aa10.8□□□□□ -0.68
CDK5RAP3-237ENST00000585163 HIVEP3Q5T1R4 2406 aa10.79□□□□□ -0.68
CDK5RAP3-237ENST00000585163 BRI3O95415 125 aa10.79□□□□□ -0.68
CDK5RAP3-237ENST00000585163 UNQ9165/PRO28630Q6UXU0 137 aa10.79□□□□□ -0.68
CDK5RAP3-237ENST00000585163 ZFAND2AQ8N6M9 145 aa10.79□□□□□ -0.68
CDK5RAP3-237ENST00000585163 OR5A1Q8NGJ0 315 aa10.79□□□□□ -0.68
CDK5RAP3-237ENST00000585163 SPCS1Q9Y6A9 102 aa10.79□□□□□ -0.68
CDK5RAP3-237ENST00000585163 SMIM2Q9BVW6 85 aa10.79□□□□□ -0.68
CDK5RAP3-237ENST00000585163 TM2D2Q9BX73 214 aa10.79□□□□□ -0.68
CDK5RAP3-237ENST00000585163 SELENOKQ9Y6D0 94 aa10.78□□□□□ -0.68
CDK5RAP3-237ENST00000585163 NDUFA4O00483 81 aa10.78□□□□□ -0.68
CDK5RAP3-237ENST00000585163 SOCS3O14543 225 aa10.78□□□□□ -0.68
CDK5RAP3-237ENST00000585163 SAP30O75446 220 aa10.78□□□□□ -0.68
CDK5RAP3-237ENST00000585163 TRBV12-3P01733 135 aa10.78□□□□□ -0.68
CDK5RAP3-237ENST00000585163 FABP2P12104 132 aa10.78□□□□□ -0.68
CDK5RAP3-237ENST00000585163 SAMD5Q5TGI4 173 aa10.78□□□□□ -0.68
CDK5RAP3-237ENST00000585163 FAM110AQ9BQ89 295 aa10.78□□□□□ -0.68
CDK5RAP3-237ENST00000585163 IGHV3OR16-10A0A075B7F0 116 aa10.77□□□□□ -0.69
CDK5RAP3-237ENST00000585163 TRAV21A0A0B4J279 112 aa10.77□□□□□ -0.69
CDK5RAP3-237ENST00000585163 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-237ENST00000585163 OVOL1O14753 267 aa10.77□□□□□ -0.69
CDK5RAP3-237ENST00000585163 PLNP26678 52 aa10.77□□□□□ -0.69
CDK5RAP3-237ENST00000585163 CEND1Q8N111 149 aa10.77□□□□□ -0.69
CDK5RAP3-237ENST00000585163 OR10J6PQ8NGY7 276 aa10.77□□□□□ -0.69
CDK5RAP3-237ENST00000585163 TRAV12-1A0A0B4J245 112 aa10.77□□□□□ -0.69
CDK5RAP3-237ENST00000585163 PHLDA1Q8WV24 401 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-237ENST00000585163 IGHV1-69DA0A0B4J2H0 117 aa10.76□□□□□ -0.69
CDK5RAP3-237ENST00000585163 IGHV1-69P01742 117 aa10.76□□□□□ -0.69
CDK5RAP3-237ENST00000585163 SUMO2P61956 95 aaKnown RBP10.76□□□□□ -0.69
CDK5RAP3-237ENST00000585163 HERV-K104P63124 156 aa10.76□□□□□ -0.69
CDK5RAP3-237ENST00000585163 NEGR1Q7Z3B1 354 aa10.76□□□□□ -0.69
CDK5RAP3-237ENST00000585163 MAPKAPK5-AS1Q8N8E1 139 aa10.76□□□□□ -0.69
CDK5RAP3-237ENST00000585163 M0R381 172 aa10.76□□□□□ -0.69
CDK5RAP3-237ENST00000585163 ORMDL2Q53FV1 153 aa10.76□□□□□ -0.69
CDK5RAP3-237ENST00000585163 RASL10AQ92737 203 aa10.76□□□□□ -0.69
CDK5RAP3-237ENST00000585163 C20orf78Q9BR46 151 aa10.76□□□□□ -0.69
CDK5RAP3-237ENST00000585163 TNFRSF18Q9Y5U5 241 aa10.76□□□□□ -0.69
CDK5RAP3-237ENST00000585163 BRD3OSQ6XYD6 125 aa10.75□□□□□ -0.69
CDK5RAP3-237ENST00000585163 FAM19A4Q96LR4 140 aa10.75□□□□□ -0.69
CDK5RAP3-237ENST00000585163 CITED1Q99966 193 aa10.75□□□□□ -0.69
CDK5RAP3-237ENST00000585163 DPH3P1Q9H4G8 78 aa10.75□□□□□ -0.69
CDK5RAP3-237ENST00000585163 AKAP6Q13023 2319 aa10.75□□□□□ -0.69
CDK5RAP3-237ENST00000585163 F8VRH5 84 aa10.75□□□□□ -0.69
CDK5RAP3-237ENST00000585163 H7C1H1 209 aa10.75□□□□□ -0.69
CDK5RAP3-237ENST00000585163 K7EMI3 77 aa10.75□□□□□ -0.69
CDK5RAP3-237ENST00000585163 K7ERJ3 54 aa10.75□□□□□ -0.69
CDK5RAP3-237ENST00000585163 IGHV4-39P01824 125 aa10.75□□□□□ -0.69
CDK5RAP3-237ENST00000585163 SLC25A16P16260 332 aa10.75□□□□□ -0.69
CDK5RAP3-237ENST00000585163 S100A4P26447 101 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-237ENST00000585163 ASIPP42127 132 aa10.75□□□□□ -0.69
CDK5RAP3-237ENST00000585163 TOMM6Q96B49 74 aa10.75□□□□□ -0.69
CDK5RAP3-237ENST00000585163 TAL2Q16559 108 aa10.74□□□□□ -0.69
CDK5RAP3-237ENST00000585163 USMG5Q96IX5 58 aa10.74□□□□□ -0.69
CDK5RAP3-237ENST00000585163 PHLDA3Q9Y5J5 127 aa10.74□□□□□ -0.69
CDK5RAP3-237ENST00000585163 A4D1N5 150 aa10.74□□□□□ -0.69
CDK5RAP3-237ENST00000585163 G3V4G9 280 aa10.74□□□□□ -0.69
CDK5RAP3-237ENST00000585163 SPRY2O43597 315 aa10.74□□□□□ -0.69
CDK5RAP3-237ENST00000585163 MED14OSP0DP75 135 aa10.74□□□□□ -0.69
CDK5RAP3-237ENST00000585163 DEFB1P60022 68 aa10.74□□□□□ -0.69
CDK5RAP3-237ENST00000585163 ANXA2RQ3ZCQ2 193 aa10.74□□□□□ -0.69
CDK5RAP3-237ENST00000585163 APRG1Q8IVJ8 170 aa10.74□□□□□ -0.69
CDK5RAP3-237ENST00000585163 C14orf178Q8N769 122 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms