RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-209ENST00000578709 KCNS1Q96KK3 526 aa16.81■□□□□ 0.28
ERBB2-209ENST00000578709 PLECQ15149 4684 aaKnown RBP16.81■□□□□ 0.28
ERBB2-209ENST00000578709 PDE6DO43924 150 aa16.8■□□□□ 0.28
ERBB2-209ENST00000578709 TEX261Q6UWH6 196 aa16.8■□□□□ 0.28
ERBB2-209ENST00000578709 ZC2HC1AQ96GY0 325 aa16.8■□□□□ 0.28
ERBB2-209ENST00000578709 MDFICQ9P1T7 246 aa16.8■□□□□ 0.28
ERBB2-209ENST00000578709 FABP5P3A8MUU1 101 aa16.79■□□□□ 0.28
ERBB2-209ENST00000578709 SPINK4O60575 86 aa16.79■□□□□ 0.28
ERBB2-209ENST00000578709 SDF2L1Q9HCN8 221 aa16.79■□□□□ 0.28
ERBB2-209ENST00000578709 IGHV3-16A0A0C4DH30 117 aa16.78■□□□□ 0.28
ERBB2-209ENST00000578709 GNRH2O43555 120 aa16.78■□□□□ 0.28
ERBB2-209ENST00000578709 TYMSP04818 313 aa16.78■□□□□ 0.28
ERBB2-209ENST00000578709 RPL35P42766 123 aaKnown RBP16.78■□□□□ 0.28
ERBB2-209ENST00000578709 Q6ZTI0 123 aa16.78■□□□□ 0.28
ERBB2-209ENST00000578709 IGLL5B9A064 214 aa16.77■□□□□ 0.28
ERBB2-209ENST00000578709 CRIP1P50238 77 aa16.77■□□□□ 0.28
ERBB2-209ENST00000578709 TCTAP57738 103 aa16.77■□□□□ 0.28
ERBB2-209ENST00000578709 LGALS9BQ3B8N2 356 aa16.77■□□□□ 0.28
ERBB2-209ENST00000578709 BAGE2Q86Y30 109 aa16.77■□□□□ 0.28
ERBB2-209ENST00000578709 DERL1Q9BUN8 251 aa16.77■□□□□ 0.28
ERBB2-209ENST00000578709 MLST8Q9BVC4 326 aa16.77■□□□□ 0.28
ERBB2-209ENST00000578709 GAGE12BA1L429 117 aa16.76■□□□□ 0.27
ERBB2-209ENST00000578709 GAGE7O76087 117 aa16.76■□□□□ 0.27
ERBB2-209ENST00000578709 ATP5G1P05496 136 aa16.76■□□□□ 0.27
ERBB2-209ENST00000578709 GAGE12FP0CL80 117 aa16.76■□□□□ 0.27
ERBB2-209ENST00000578709 GAGE12GP0CL81 117 aa16.76■□□□□ 0.27
ERBB2-209ENST00000578709 GAGE12IP0CL82 117 aa16.76■□□□□ 0.27
ERBB2-209ENST00000578709 ZNF674Q2M3X9 581 aa16.76■□□□□ 0.27
ERBB2-209ENST00000578709 FAM162BQ5T6X4 162 aa16.76■□□□□ 0.27
ERBB2-209ENST00000578709 FAM210BQ96KR6 192 aa16.76■□□□□ 0.27
ERBB2-209ENST00000578709 C18orf15Q96N68 181 aa16.76■□□□□ 0.27
ERBB2-209ENST00000578709 SPXQ9BT56 116 aa16.76■□□□□ 0.27
ERBB2-209ENST00000578709 TRGV1A0A0A0MS02 117 aa16.75■□□□□ 0.27
ERBB2-209ENST00000578709 RBFOX3A6NFN3 312 aa16.75■□□□□ 0.27
ERBB2-209ENST00000578709 HTN3P15516 51 aa16.75■□□□□ 0.27
ERBB2-209ENST00000578709 IGHV4-4A0A075B6R2 117 aa16.74■□□□□ 0.27
ERBB2-209ENST00000578709 SH2D1AO60880 128 aa16.74■□□□□ 0.27
ERBB2-209ENST00000578709 ZNF506Q5JVG8 444 aa16.74■□□□□ 0.27
ERBB2-209ENST00000578709 NHLRC2Q8NBF2 726 aa16.74■□□□□ 0.27
ERBB2-209ENST00000578709 APLNQ9ULZ1 77 aa16.74■□□□□ 0.27
ERBB2-209ENST00000578709 LYSTQ99698 3801 aa16.74■□□□□ 0.27
ERBB2-209ENST00000578709 MUC4Q99102 2169 aa16.74■□□□□ 0.27
ERBB2-209ENST00000578709 IGKV3D-20A0A0C4DH25 116 aa16.73■□□□□ 0.27
ERBB2-209ENST00000578709 MED9Q9NWA0 146 aa16.73■□□□□ 0.27
ERBB2-209ENST00000578709 LCE6AA0A183 80 aa16.72■□□□□ 0.27
ERBB2-209ENST00000578709 MRPL16Q9NX20 251 aaKnown RBP16.72■□□□□ 0.27
ERBB2-209ENST00000578709 ALMS1Q8TCU4 4167 aa16.71■□□□□ 0.27
ERBB2-209ENST00000578709 TRGV2A0A075B6R0 118 aa16.71■□□□□ 0.27
ERBB2-209ENST00000578709 CENPWQ5EE01 88 aa16.71■□□□□ 0.27
ERBB2-209ENST00000578709 RASL10AQ92737 203 aa16.71■□□□□ 0.27
ERBB2-209ENST00000578709 DNAH1Q9P2D7 4330 aa16.7■□□□□ 0.26
ERBB2-209ENST00000578709 KRBOX1C9JBD0 128 aa16.7■□□□□ 0.26
ERBB2-209ENST00000578709 F5H768 121 aa16.7■□□□□ 0.26
ERBB2-209ENST00000578709 M0R2P5 195 aa16.7■□□□□ 0.26
ERBB2-209ENST00000578709 ORM1P02763 201 aa16.7■□□□□ 0.26
ERBB2-209ENST00000578709 LINC01559Q495D7 138 aa16.7■□□□□ 0.26
ERBB2-209ENST00000578709 SMIM12Q96EX1 92 aa16.7■□□□□ 0.26
ERBB2-209ENST00000578709 C9orf85Q96MD7 179 aa16.7■□□□□ 0.26
ERBB2-209ENST00000578709 FAM210AQ96ND0 272 aa16.7■□□□□ 0.26
ERBB2-209ENST00000578709 NDUFAF3Q9BU61 184 aa16.7■□□□□ 0.26
ERBB2-209ENST00000578709 RAB19A4D1S5 217 aa16.69■□□□□ 0.26
ERBB2-209ENST00000578709 B4DEV8 164 aa16.69■□□□□ 0.26
ERBB2-209ENST00000578709 TMEM250H0YL14 139 aa16.69■□□□□ 0.26
ERBB2-209ENST00000578709 NDUFS6O75380 124 aaKnown RBP16.69■□□□□ 0.26
ERBB2-209ENST00000578709 TRBV20OR9-2A0A075B6H5 130 aa16.68■□□□□ 0.26
ERBB2-209ENST00000578709 IGLV2-8P01709 118 aa16.68■□□□□ 0.26
ERBB2-209ENST00000578709 RNASE3P12724 160 aaKnown RBP16.68■□□□□ 0.26
ERBB2-209ENST00000578709 GNG4P50150 75 aa16.68■□□□□ 0.26
ERBB2-209ENST00000578709 TOR2AQ5JU69 321 aa16.68■□□□□ 0.26
ERBB2-209ENST00000578709 DNLZQ5SXM8 178 aa16.68■□□□□ 0.26
ERBB2-209ENST00000578709 TMEM88Q6PEY1 159 aa16.68■□□□□ 0.26
ERBB2-209ENST00000578709 PCNPQ8WW12 178 aaKnown RBP16.68■□□□□ 0.26
ERBB2-209ENST00000578709 SACSQ9NZJ4 4579 aa16.68■□□□□ 0.26
ERBB2-209ENST00000578709 ZNF575Q86XF7 245 aa16.67■□□□□ 0.26
ERBB2-209ENST00000578709 LINC00476Q8WZB0 136 aa16.67■□□□□ 0.26
ERBB2-209ENST00000578709 M0R036 132 aa16.66■□□□□ 0.26
ERBB2-209ENST00000578709 HOXA5P20719 270 aa16.66■□□□□ 0.26
ERBB2-209ENST00000578709 ASIPP42127 132 aa16.66■□□□□ 0.26
ERBB2-209ENST00000578709 PTH2Q96A98 100 aa16.66■□□□□ 0.26
ERBB2-209ENST00000578709 EIF5A2Q9GZV4 153 aaKnown RBP16.66■□□□□ 0.26
ERBB2-209ENST00000578709 S100A4P26447 101 aaKnown RBP16.64■□□□□ 0.25
ERBB2-209ENST00000578709 PRR27Q6MZM9 219 aa16.64■□□□□ 0.25
ERBB2-209ENST00000578709 IL36BQ9NZH7 164 aa16.64■□□□□ 0.25
ERBB2-209ENST00000578709 C9JCJ5 164 aa16.63■□□□□ 0.25
ERBB2-209ENST00000578709 OR5I1Q13606 314 aa16.63■□□□□ 0.25
ERBB2-209ENST00000578709 LGALS9CQ6DKI2 356 aa16.63■□□□□ 0.25
ERBB2-209ENST00000578709 C15orf53Q8NAA6 179 aa16.63■□□□□ 0.25
ERBB2-209ENST00000578709 PARLQ9H300 379 aa16.63■□□□□ 0.25
ERBB2-209ENST00000578709 CXCL1P09341 107 aa16.62■□□□□ 0.25
ERBB2-209ENST00000578709 MGST1P10620 155 aaKnown RBP16.62■□□□□ 0.25
ERBB2-209ENST00000578709 ZNF876PQ49A33 203 aa16.62■□□□□ 0.25
ERBB2-209ENST00000578709 POM121L12Q8N7R1 296 aa16.62■□□□□ 0.25
ERBB2-209ENST00000578709 RYR2Q92736 4967 aa16.61■□□□□ 0.25
ERBB2-209ENST00000578709 TMSB15BA0A087X1C1 80 aa16.61■□□□□ 0.25
ERBB2-209ENST00000578709 TRAV4A0A0B4J268 109 aa16.61■□□□□ 0.25
ERBB2-209ENST00000578709 GRIFINA4D1Z8 144 aa16.61■□□□□ 0.25
ERBB2-209ENST00000578709 PGPEP1LA6NFU8 196 aa16.61■□□□□ 0.25
ERBB2-209ENST00000578709 IGHV3-53P01767 116 aa16.61■□□□□ 0.25
ERBB2-209ENST00000578709 BIN3Q9NQY0 253 aa16.61■□□□□ 0.25
ERBB2-209ENST00000578709 NACAE9PAV3 2078 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms