RNA–Protein interactions for RNA: ENST00000577840.5

CUEDC1-207, Transcript of CUE domain containing 1, humanhuman

TSL 5 BASIC

Gene CUEDC1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-207ENST00000577840 UBE2CO00762 179 aa11.29□□□□□ -0.6
CUEDC1-207ENST00000577840 ZNF324O75467 553 aaPredicted RBP11.29□□□□□ -0.6
CUEDC1-207ENST00000577840 LINC01559Q495D7 138 aa11.29□□□□□ -0.6
CUEDC1-207ENST00000577840 LINC01587Q99440 93 aa11.29□□□□□ -0.6
CUEDC1-207ENST00000577840 CT83Q5H943 113 aa11.28□□□□□ -0.6
CUEDC1-207ENST00000577840 MUC21Q5SSG8 566 aa11.28□□□□□ -0.6
CUEDC1-207ENST00000577840 PYGO2Q9BRQ0 406 aa11.28□□□□□ -0.6
CUEDC1-207ENST00000577840 TMEM242Q9NWH2 141 aa11.28□□□□□ -0.6
CUEDC1-207ENST00000577840 V9GYV3 84 aa11.28□□□□□ -0.6
CUEDC1-207ENST00000577840 IGHV1OR15-1A0A075B7D0 117 aa11.27□□□□□ -0.61
CUEDC1-207ENST00000577840 TMSB15BA0A087X1C1 80 aa11.27□□□□□ -0.61
CUEDC1-207ENST00000577840 IGHV3OR16-12A0A075B7B8 117 aa11.26□□□□□ -0.61
CUEDC1-207ENST00000577840 GIG44P09565 113 aaPredicted RBP11.26□□□□□ -0.61
CUEDC1-207ENST00000577840 S100PP25815 95 aa11.26□□□□□ -0.61
CUEDC1-207ENST00000577840 RPL19P84098 196 aaKnown RBP11.26□□□□□ -0.61
CUEDC1-207ENST00000577840 ANXA2RQ3ZCQ2 193 aa11.26□□□□□ -0.61
CUEDC1-207ENST00000577840 KCNIP4Q6PIL6 250 aa11.26□□□□□ -0.61
CUEDC1-207ENST00000577840 ATRAIDQ6UW56 229 aa11.26□□□□□ -0.61
CUEDC1-207ENST00000577840 Q6ZQT7 251 aa11.26□□□□□ -0.61
CUEDC1-207ENST00000577840 IL36BQ9NZH7 164 aa11.26□□□□□ -0.61
CUEDC1-207ENST00000577840 TRGV11A0A075B6L2 103 aa11.25□□□□□ -0.61
CUEDC1-207ENST00000577840 IGKV3D-20A0A0C4DH25 116 aa11.25□□□□□ -0.61
CUEDC1-207ENST00000577840 CBY3A6NI87 242 aa11.25□□□□□ -0.61
CUEDC1-207ENST00000577840 PRB2P02812 416 aaPredicted RBP11.25□□□□□ -0.61
CUEDC1-207ENST00000577840 FRMD6-AS1P0C7T7 363 aa11.25□□□□□ -0.61
CUEDC1-207ENST00000577840 HTN1P15515 57 aa11.25□□□□□ -0.61
CUEDC1-207ENST00000577840 S100A4P26447 101 aaKnown RBP11.25□□□□□ -0.61
CUEDC1-207ENST00000577840 ASIPP42127 132 aa11.25□□□□□ -0.61
CUEDC1-207ENST00000577840 TDRG1Q3Y452 100 aa11.25□□□□□ -0.61
CUEDC1-207ENST00000577840 DEFB121Q5J5C9 76 aa11.25□□□□□ -0.61
CUEDC1-207ENST00000577840 TSKUQ8WUA8 353 aa11.25□□□□□ -0.61
CUEDC1-207ENST00000577840 C11orf21Q9P2W6 132 aa11.25□□□□□ -0.61
CUEDC1-207ENST00000577840 CXorf65A6NEN9 183 aa11.24□□□□□ -0.61
CUEDC1-207ENST00000577840 CXCL1P09341 107 aa11.24□□□□□ -0.61
CUEDC1-207ENST00000577840 RBMY1A1P0DJD3 496 aaKnown RBP11.24□□□□□ -0.61
CUEDC1-207ENST00000577840 RBMY1CP0DJD4 496 aa11.24□□□□□ -0.61
CUEDC1-207ENST00000577840 RBMY1FQ15415 496 aaKnown RBP11.24□□□□□ -0.61
CUEDC1-207ENST00000577840 C1orf158Q8N1D5 194 aa11.24□□□□□ -0.61
CUEDC1-207ENST00000577840 IMMP2LQ96T52 175 aa11.24□□□□□ -0.61
CUEDC1-207ENST00000577840 LINC00467Q9BRT7 94 aa11.24□□□□□ -0.61
CUEDC1-207ENST00000577840 GFRA4Q9GZZ7 299 aa11.24□□□□□ -0.61
CUEDC1-207ENST00000577840 A0A1W2PPQ1 181 aa11.23□□□□□ -0.61
CUEDC1-207ENST00000577840 GRIFINA4D1Z8 144 aa11.23□□□□□ -0.61
CUEDC1-207ENST00000577840 FAM231BA6NCW3 169 aa11.23□□□□□ -0.61
CUEDC1-207ENST00000577840 K7EIL1 84 aa11.23□□□□□ -0.61
CUEDC1-207ENST00000577840 CSNK1G2-AS1Q8NCQ2 148 aa11.23□□□□□ -0.61
CUEDC1-207ENST00000577840 RCHY1Q96PM5 261 aa11.23□□□□□ -0.61
CUEDC1-207ENST00000577840 SMCO4Q9NRQ5 59 aa11.23□□□□□ -0.61
CUEDC1-207ENST00000577840 NAT8BQ9UHF3 227 aa11.23□□□□□ -0.61
CUEDC1-207ENST00000577840 SMIM27A0A1W2PRY6 76 aa11.22□□□□□ -0.61
CUEDC1-207ENST00000577840 GNRH2O43555 120 aa11.22□□□□□ -0.61
CUEDC1-207ENST00000577840 TYMSP04818 313 aa11.22□□□□□ -0.61
CUEDC1-207ENST00000577840 GZMBP10144 247 aa11.22□□□□□ -0.61
CUEDC1-207ENST00000577840 TCL1AP56279 114 aa11.22□□□□□ -0.61
CUEDC1-207ENST00000577840 DEFB135Q30KP9 77 aa11.22□□□□□ -0.61
CUEDC1-207ENST00000577840 Q6ZWC4 215 aa11.22□□□□□ -0.61
CUEDC1-207ENST00000577840 FER1L6-AS1Q8NA97 138 aa11.22□□□□□ -0.61
CUEDC1-207ENST00000577840 BORCS7Q96B45 105 aa11.22□□□□□ -0.61
CUEDC1-207ENST00000577840 TPPP3Q9BW30 176 aa11.22□□□□□ -0.61
CUEDC1-207ENST00000577840 HIGD1CA8MV81 97 aa11.21□□□□□ -0.61
CUEDC1-207ENST00000577840 ZNF415Q09FC8 603 aa11.21□□□□□ -0.61
CUEDC1-207ENST00000577840 RRN3P1Q2M238 152 aa11.21□□□□□ -0.61
CUEDC1-207ENST00000577840 ZNF705AQ6ZN79 300 aaPredicted RBP11.21□□□□□ -0.61
CUEDC1-207ENST00000577840 NEU1Q99519 415 aa11.21□□□□□ -0.61
CUEDC1-207ENST00000577840 DNAH3Q8TD57 4116 aa11.21□□□□□ -0.62
CUEDC1-207ENST00000577840 SMIM9A6NGZ8 99 aa11.2□□□□□ -0.62
CUEDC1-207ENST00000577840 F2Z2F3 143 aa11.2□□□□□ -0.62
CUEDC1-207ENST00000577840 MED14OSP0DP75 135 aa11.2□□□□□ -0.62
CUEDC1-207ENST00000577840 DNLZQ5SXM8 178 aa11.2□□□□□ -0.62
CUEDC1-207ENST00000577840 TMEM88Q6PEY1 159 aa11.2□□□□□ -0.62
CUEDC1-207ENST00000577840 BTF3L4Q96K17 158 aa11.2□□□□□ -0.62
CUEDC1-207ENST00000577840 PGLYRP4Q96LB8 373 aa11.2□□□□□ -0.62
CUEDC1-207ENST00000577840 TP53TG3Q9ULZ0 132 aa11.2□□□□□ -0.62
CUEDC1-207ENST00000577840 TIMM8BQ9Y5J9 83 aaPredicted RBP11.2□□□□□ -0.62
CUEDC1-207ENST00000577840 URGCP-MRPS24S4R325 110 aa11.2□□□□□ -0.62
CUEDC1-207ENST00000577840 TRAV9-1A0A075B6T8 112 aa11.19□□□□□ -0.62
CUEDC1-207ENST00000577840 H3BVH4 76 aa11.19□□□□□ -0.62
CUEDC1-207ENST00000577840 SPRY2O43597 315 aa11.19□□□□□ -0.62
CUEDC1-207ENST00000577840 ARMS2P0C7Q2 107 aa11.19□□□□□ -0.62
CUEDC1-207ENST00000577840 FOXA3P55318 350 aaPredicted RBP11.19□□□□□ -0.62
CUEDC1-207ENST00000577840 FAM3BP58499 235 aaPredicted RBP11.19□□□□□ -0.62
CUEDC1-207ENST00000577840 ZNF493Q6ZR52 646 aa11.19□□□□□ -0.62
CUEDC1-207ENST00000577840 CBLN2Q8IUK8 224 aa11.19□□□□□ -0.62
CUEDC1-207ENST00000577840 MRAPQ8TCY5 172 aa11.19□□□□□ -0.62
CUEDC1-207ENST00000577840 GTSF1Q8WW33 167 aa11.19□□□□□ -0.62
CUEDC1-207ENST00000577840 RNF183Q96D59 192 aa11.19□□□□□ -0.62
CUEDC1-207ENST00000577840 C16orf74Q96GX8 76 aa11.19□□□□□ -0.62
CUEDC1-207ENST00000577840 IGHV3-16A0A0C4DH30 117 aa11.18□□□□□ -0.62
CUEDC1-207ENST00000577840 SCO1O75880 301 aa11.18□□□□□ -0.62
CUEDC1-207ENST00000577840 OR5AL1P0C617 328 aa11.18□□□□□ -0.62
CUEDC1-207ENST00000577840 IGLC6P0CF74 106 aa11.18□□□□□ -0.62
CUEDC1-207ENST00000577840 LYZL1Q6UWQ5 148 aa11.18□□□□□ -0.62
CUEDC1-207ENST00000577840 NUP35Q8NFH5 326 aa11.18□□□□□ -0.62
CUEDC1-207ENST00000577840 OR11H2Q8NH07 326 aa11.18□□□□□ -0.62
CUEDC1-207ENST00000577840 TMEM263Q8WUH6 116 aaKnown RBP11.18□□□□□ -0.62
CUEDC1-207ENST00000577840 TP53TG1Q9Y2A0 90 aa11.18□□□□□ -0.62
CUEDC1-207ENST00000577840 PHLDA3Q9Y5J5 127 aa11.18□□□□□ -0.62
CUEDC1-207ENST00000577840 SNURFLB1AK76 121 aa11.17□□□□□ -0.62
CUEDC1-207ENST00000577840 CACNG7P62955 275 aa11.17□□□□□ -0.62
CUEDC1-207ENST00000577840 SPANXN1Q5VSR9 72 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms