RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 MDFICQ9P1T7 246 aa10.7□□□□□ -0.7
SMG6-220ENST00000576218 TRAV34A0A0B4J273 112 aa10.69□□□□□ -0.7
SMG6-220ENST00000576218 DPPA3Q6W0C5 159 aa10.69□□□□□ -0.7
SMG6-220ENST00000576218 AKAP14Q86UN6 197 aa10.69□□□□□ -0.7
SMG6-220ENST00000576218 TCTE3Q8IZS6 198 aa10.69□□□□□ -0.7
SMG6-220ENST00000576218 HIST1H2BAQ96A08 127 aa10.69□□□□□ -0.7
SMG6-220ENST00000576218 DNAH1Q9P2D7 4330 aa10.68□□□□□ -0.7
SMG6-220ENST00000576218 TRGV4A0A0C4DH28 118 aa10.68□□□□□ -0.7
SMG6-220ENST00000576218 GNRH2O43555 120 aa10.68□□□□□ -0.7
SMG6-220ENST00000576218 PFN1P07737 140 aaKnown RBP10.68□□□□□ -0.7
SMG6-220ENST00000576218 H2AFB1P0C5Y9 115 aa10.68□□□□□ -0.7
SMG6-220ENST00000576218 FAM3BP58499 235 aaPredicted RBP10.68□□□□□ -0.7
SMG6-220ENST00000576218 TDRG1Q3Y452 100 aa10.68□□□□□ -0.7
SMG6-220ENST00000576218 C18orf15Q96N68 181 aa10.68□□□□□ -0.7
SMG6-220ENST00000576218 TYMSP04818 313 aa10.67□□□□□ -0.7
SMG6-220ENST00000576218 AKR1C3P42330 323 aa10.67□□□□□ -0.7
SMG6-220ENST00000576218 Q6ZNX1 250 aa10.67□□□□□ -0.7
SMG6-220ENST00000576218 Q86TA4 180 aa10.67□□□□□ -0.7
SMG6-220ENST00000576218 LINC00479Q96M42 142 aa10.67□□□□□ -0.7
SMG6-220ENST00000576218 ARL2-SNX15V9GYD0 113 aa10.67□□□□□ -0.7
SMG6-220ENST00000576218 IGHV3-16A0A0C4DH30 117 aa10.66□□□□□ -0.7
SMG6-220ENST00000576218 TEX46H3BTG2 121 aa10.66□□□□□ -0.7
SMG6-220ENST00000576218 M0R2P5 195 aa10.66□□□□□ -0.7
SMG6-220ENST00000576218 PAX4O43316 350 aa10.66□□□□□ -0.7
SMG6-220ENST00000576218 PAGE4O60829 102 aa10.66□□□□□ -0.7
SMG6-220ENST00000576218 IGLV2-11P01706 119 aa10.66□□□□□ -0.7
SMG6-220ENST00000576218 SLAQ13239 276 aa10.66□□□□□ -0.7
SMG6-220ENST00000576218 FMC1Q96HJ9 113 aa10.66□□□□□ -0.7
SMG6-220ENST00000576218 TCEAL7Q9BRU2 100 aa10.66□□□□□ -0.7
SMG6-220ENST00000576218 HYDINQ4G0P3 5121 aa10.65□□□□□ -0.7
SMG6-220ENST00000576218 C9JCJ5 164 aa10.65□□□□□ -0.7
SMG6-220ENST00000576218 H3BNG1 76 aa10.65□□□□□ -0.7
SMG6-220ENST00000576218 C1QBP02746 253 aa10.65□□□□□ -0.7
SMG6-220ENST00000576218 S100A4P26447 101 aaKnown RBP10.65□□□□□ -0.7
SMG6-220ENST00000576218 ZNF80P51504 273 aaPredicted RBP10.65□□□□□ -0.7
SMG6-220ENST00000576218 OR4C5Q8NGB2 326 aa10.65□□□□□ -0.7
SMG6-220ENST00000576218 PCNPQ8WW12 178 aaKnown RBP10.65□□□□□ -0.7
SMG6-220ENST00000576218 ICOSQ9Y6W8 199 aa10.65□□□□□ -0.7
SMG6-220ENST00000576218 SFTA3P0C7M3 94 aa10.64□□□□□ -0.71
SMG6-220ENST00000576218 RAB5CP51148 216 aa10.64□□□□□ -0.71
SMG6-220ENST00000576218 LGALSLQ3ZCW2 172 aaPredicted RBP10.64□□□□□ -0.71
SMG6-220ENST00000576218 SOHLH1Q5JUK2 328 aa10.64□□□□□ -0.71
SMG6-220ENST00000576218 MBD3L1Q8WWY6 194 aa10.64□□□□□ -0.71
SMG6-220ENST00000576218 PRO0255Q9UI72 69 aa10.64□□□□□ -0.71
SMG6-220ENST00000576218 HHLA3Q9XRX5 114 aa10.64□□□□□ -0.71
SMG6-220ENST00000576218 FABP5P3A8MUU1 101 aa10.63□□□□□ -0.71
SMG6-220ENST00000576218 ORM1P02763 201 aa10.63□□□□□ -0.71
SMG6-220ENST00000576218 RASL10AQ92737 203 aa10.63□□□□□ -0.71
SMG6-220ENST00000576218 ZFP30Q9Y2G7 519 aa10.63□□□□□ -0.71
SMG6-220ENST00000576218 LINC00588Q9Y4M8 146 aa10.63□□□□□ -0.71
SMG6-220ENST00000576218 TRAV4A0A0B4J268 109 aa10.62□□□□□ -0.71
SMG6-220ENST00000576218 ASIPP42127 132 aa10.62□□□□□ -0.71
SMG6-220ENST00000576218 VSIG2Q96IQ7 327 aa10.62□□□□□ -0.71
SMG6-220ENST00000576218 ZNF479Q96JC4 524 aa10.62□□□□□ -0.71
SMG6-220ENST00000576218 GNG13Q9P2W3 67 aa10.62□□□□□ -0.71
SMG6-220ENST00000576218 B4DEV8 164 aa10.61□□□□□ -0.71
SMG6-220ENST00000576218 ZNF876PQ49A33 203 aa10.61□□□□□ -0.71
SMG6-220ENST00000576218 FAM162BQ5T6X4 162 aa10.61□□□□□ -0.71
SMG6-220ENST00000576218 LINC00336Q6ZUF6 198 aa10.61□□□□□ -0.71
SMG6-220ENST00000576218 SLC51BQ86UW2 128 aa10.61□□□□□ -0.71
SMG6-220ENST00000576218 MANBALQ9NQG1 85 aa10.61□□□□□ -0.71
SMG6-220ENST00000576218 MUC4Q99102 2169 aa10.6□□□□□ -0.71
SMG6-220ENST00000576218 A0A096LPF7 62 aa10.6□□□□□ -0.71
SMG6-220ENST00000576218 SCO2A0A1W2PP80 73 aa10.6□□□□□ -0.71
SMG6-220ENST00000576218 M0R036 132 aa10.6□□□□□ -0.71
SMG6-220ENST00000576218 S100A9P06702 114 aaKnown RBP10.6□□□□□ -0.71
SMG6-220ENST00000576218 SRIP30626 198 aa10.6□□□□□ -0.71
SMG6-220ENST00000576218 CRYBA4P53673 196 aa10.6□□□□□ -0.71
SMG6-220ENST00000576218 FHL2Q14192 279 aa10.6□□□□□ -0.71
SMG6-220ENST00000576218 MRPL23Q16540 153 aaKnown RBP10.6□□□□□ -0.71
SMG6-220ENST00000576218 ZNRF2Q8NHG8 242 aa10.6□□□□□ -0.71
SMG6-220ENST00000576218 ZC2HC1AQ96GY0 325 aa10.6□□□□□ -0.71
SMG6-220ENST00000576218 C11orf21Q9P2W6 132 aa10.6□□□□□ -0.71
SMG6-220ENST00000576218 KMT2AQ03164 3969 aa10.6□□□□□ -0.71
SMG6-220ENST00000576218 NBDYA0A0U1RRE5 68 aa10.59□□□□□ -0.71
SMG6-220ENST00000576218 IFNA1P01562 189 aa10.59□□□□□ -0.71
SMG6-220ENST00000576218 ESRGQ1W209 222 aa10.59□□□□□ -0.71
SMG6-220ENST00000576218 C1orf134Q5TEV5 83 aa10.59□□□□□ -0.71
SMG6-220ENST00000576218 NHLRC2Q8NBF2 726 aa10.59□□□□□ -0.71
SMG6-220ENST00000576218 NACAE9PAV3 2078 aa10.58□□□□□ -0.72
SMG6-220ENST00000576218 SH2D1AO60880 128 aa10.58□□□□□ -0.72
SMG6-220ENST00000576218 LTAP01374 205 aa10.58□□□□□ -0.72
SMG6-220ENST00000576218 GYPEP15421 78 aa10.58□□□□□ -0.72
SMG6-220ENST00000576218 SULT1A2P50226 295 aa10.58□□□□□ -0.72
SMG6-220ENST00000576218 TTC32Q5I0X7 151 aa10.58□□□□□ -0.72
SMG6-220ENST00000576218 Q9H8V8 135 aa10.58□□□□□ -0.72
SMG6-220ENST00000576218 MRPS16Q9Y3D3 137 aaKnown RBP10.58□□□□□ -0.72
SMG6-220ENST00000576218 TMSB15BA0A087X1C1 80 aa10.57□□□□□ -0.72
SMG6-220ENST00000576218 TRBV6-1A0A0K0K1D8 114 aa10.57□□□□□ -0.72
SMG6-220ENST00000576218 PRSS29PA6NIE9 313 aa10.57□□□□□ -0.72
SMG6-220ENST00000576218 H3BVH4 76 aa10.57□□□□□ -0.72
SMG6-220ENST00000576218 ZNF506Q5JVG8 444 aa10.57□□□□□ -0.72
SMG6-220ENST00000576218 NEGR1Q7Z3B1 354 aa10.57□□□□□ -0.72
SMG6-220ENST00000576218 BAGE2Q86Y30 109 aa10.57□□□□□ -0.72
SMG6-220ENST00000576218 SYT8Q8NBV8 401 aa10.57□□□□□ -0.72
SMG6-220ENST00000576218 C9orf85Q96MD7 179 aa10.57□□□□□ -0.72
SMG6-220ENST00000576218 TXNDC17Q9BRA2 123 aa10.57□□□□□ -0.72
SMG6-220ENST00000576218 IGHV3-73A0A0B4J1V6 119 aa10.56□□□□□ -0.72
SMG6-220ENST00000576218 IGKV3D-20A0A0C4DH25 116 aa10.56□□□□□ -0.72
SMG6-220ENST00000576218 GRIFINA4D1Z8 144 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms