RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 CYB561D1Q8N8Q1 229 aa12.29□□□□□ -0.44
CTDNEP1-207ENST00000572043 SPXQ9BT56 116 aa12.29□□□□□ -0.44
CTDNEP1-207ENST00000572043 PRO0255Q9UI72 69 aa12.29□□□□□ -0.44
CTDNEP1-207ENST00000572043 HHLA3Q9XRX5 114 aa12.29□□□□□ -0.44
CTDNEP1-207ENST00000572043 ICOSQ9Y6W8 199 aa12.29□□□□□ -0.44
CTDNEP1-207ENST00000572043 GCGP01275 180 aa12.28□□□□□ -0.44
CTDNEP1-207ENST00000572043 CRYBA4P53673 196 aa12.28□□□□□ -0.44
CTDNEP1-207ENST00000572043 C6orf223Q8N319 242 aa12.28□□□□□ -0.44
CTDNEP1-207ENST00000572043 TMEM75Q8N9X5 138 aa12.28□□□□□ -0.44
CTDNEP1-207ENST00000572043 MRPS16Q9Y3D3 137 aaKnown RBP12.28□□□□□ -0.44
CTDNEP1-207ENST00000572043 NACAE9PAV3 2078 aa12.27□□□□□ -0.45
CTDNEP1-207ENST00000572043 A0A1W2PRE2 83 aa12.27□□□□□ -0.45
CTDNEP1-207ENST00000572043 ZFP69Q49AA0 526 aa12.27□□□□□ -0.45
CTDNEP1-207ENST00000572043 OR11H4Q8NGC9 324 aa12.27□□□□□ -0.45
CTDNEP1-207ENST00000572043 RASL10AQ92737 203 aa12.27□□□□□ -0.45
CTDNEP1-207ENST00000572043 C11orf21Q9P2W6 132 aa12.27□□□□□ -0.45
CTDNEP1-207ENST00000572043 MAP1LC3B2A6NCE7 125 aa12.26□□□□□ -0.45
CTDNEP1-207ENST00000572043 M0R2P5 195 aa12.26□□□□□ -0.45
CTDNEP1-207ENST00000572043 FHITP49789 147 aa12.26□□□□□ -0.45
CTDNEP1-207ENST00000572043 SLAQ13239 276 aa12.26□□□□□ -0.45
CTDNEP1-207ENST00000572043 SMUG1Q53HV7 270 aa12.26□□□□□ -0.45
CTDNEP1-207ENST00000572043 KCNRGQ8N5I3 272 aa12.26□□□□□ -0.45
CTDNEP1-207ENST00000572043 KCNS1Q96KK3 526 aa12.26□□□□□ -0.45
CTDNEP1-207ENST00000572043 UPK3BQ9BT76 320 aa12.26□□□□□ -0.45
CTDNEP1-207ENST00000572043 KRTAP1-5Q9BYS1 174 aa12.26□□□□□ -0.45
CTDNEP1-207ENST00000572043 MAP1LC3BQ9GZQ8 125 aa12.26□□□□□ -0.45
CTDNEP1-207ENST00000572043 DNAH2Q9P225 4427 aa12.25□□□□□ -0.45
CTDNEP1-207ENST00000572043 FAM74A7A6NL05 159 aa12.25□□□□□ -0.45
CTDNEP1-207ENST00000572043 C9JCJ5 164 aa12.25□□□□□ -0.45
CTDNEP1-207ENST00000572043 PEX7O00628 323 aa12.25□□□□□ -0.45
CTDNEP1-207ENST00000572043 TNP2Q05952 138 aa12.25□□□□□ -0.45
CTDNEP1-207ENST00000572043 OR4C5Q8NGB2 326 aa12.25□□□□□ -0.45
CTDNEP1-207ENST00000572043 PFN1P07737 140 aaKnown RBP12.24□□□□□ -0.45
CTDNEP1-207ENST00000572043 SAPCD1Q5SSQ6 148 aa12.24□□□□□ -0.45
CTDNEP1-207ENST00000572043 ARL2-SNX15V9GYD0 113 aa12.24□□□□□ -0.45
CTDNEP1-207ENST00000572043 TRAV4A0A0B4J268 109 aa12.23□□□□□ -0.45
CTDNEP1-207ENST00000572043 A0A1B0GV50 99 aa12.23□□□□□ -0.45
CTDNEP1-207ENST00000572043 GYPEP15421 78 aa12.23□□□□□ -0.45
CTDNEP1-207ENST00000572043 PPT1P50897 306 aa12.23□□□□□ -0.45
CTDNEP1-207ENST00000572043 ZNF345Q14585 488 aa12.23□□□□□ -0.45
CTDNEP1-207ENST00000572043 MRPL23Q16540 153 aaKnown RBP12.23□□□□□ -0.45
CTDNEP1-207ENST00000572043 PCNPQ8WW12 178 aaKnown RBP12.23□□□□□ -0.45
CTDNEP1-207ENST00000572043 ZNF471Q9BX82 626 aaPredicted RBP12.23□□□□□ -0.45
CTDNEP1-207ENST00000572043 K7EQD1 137 aa12.22□□□□□ -0.45
CTDNEP1-207ENST00000572043 NXPH4O95158 308 aa12.22□□□□□ -0.45
CTDNEP1-207ENST00000572043 TTC32Q5I0X7 151 aa12.22□□□□□ -0.45
CTDNEP1-207ENST00000572043 CST9LP1Q5W188 147 aa12.22□□□□□ -0.45
CTDNEP1-207ENST00000572043 STOML3Q8TAV4 291 aa12.22□□□□□ -0.45
CTDNEP1-207ENST00000572043 FAM213BQ8TBF2 198 aa12.22□□□□□ -0.45
CTDNEP1-207ENST00000572043 FAT2Q9NYQ8 4349 aa12.22□□□□□ -0.45
CTDNEP1-207ENST00000572043 LOC100131303A0A0U1RQF7 123 aa12.21□□□□□ -0.45
CTDNEP1-207ENST00000572043 KANTRA0A1W2PQU2 76 aa12.21□□□□□ -0.45
CTDNEP1-207ENST00000572043 FBLL1A6NHQ2 334 aaKnown RBP12.21□□□□□ -0.45
CTDNEP1-207ENST00000572043 HMSDA8MTL9 139 aa12.21□□□□□ -0.45
CTDNEP1-207ENST00000572043 BCL2L11O43521 198 aa12.21□□□□□ -0.45
CTDNEP1-207ENST00000572043 SRIP30626 198 aa12.21□□□□□ -0.45
CTDNEP1-207ENST00000572043 ZNF876PQ49A33 203 aa12.21□□□□□ -0.45
CTDNEP1-207ENST00000572043 LYPD5Q6UWN5 251 aa12.21□□□□□ -0.45
CTDNEP1-207ENST00000572043 NEGR1Q7Z3B1 354 aa12.21□□□□□ -0.45
CTDNEP1-207ENST00000572043 Q86TA4 180 aa12.21□□□□□ -0.45
CTDNEP1-207ENST00000572043 HECTD4Q9Y4D8 3996 aa12.21□□□□□ -0.46
CTDNEP1-207ENST00000572043 IGHV3-73A0A0B4J1V6 119 aa12.2□□□□□ -0.46
CTDNEP1-207ENST00000572043 A0A0D9SG52 128 aa12.2□□□□□ -0.46
CTDNEP1-207ENST00000572043 DPPA3Q6W0C5 159 aa12.2□□□□□ -0.46
CTDNEP1-207ENST00000572043 ZNF575Q86XF7 245 aa12.2□□□□□ -0.46
CTDNEP1-207ENST00000572043 SFT2D1Q8WV19 159 aa12.2□□□□□ -0.46
CTDNEP1-207ENST00000572043 HIST1H2BAQ96A08 127 aa12.2□□□□□ -0.46
CTDNEP1-207ENST00000572043 NKX6-2Q9C056 277 aaPredicted RBP12.2□□□□□ -0.46
CTDNEP1-207ENST00000572043 IGKV3D-20A0A0C4DH25 116 aa12.19□□□□□ -0.46
CTDNEP1-207ENST00000572043 SIVA1O15304 175 aa12.19□□□□□ -0.46
CTDNEP1-207ENST00000572043 SEC11BP0C7V7 166 aa12.19□□□□□ -0.46
CTDNEP1-207ENST00000572043 C9orf85Q96MD7 179 aa12.19□□□□□ -0.46
CTDNEP1-207ENST00000572043 PGPEP1LA6NFU8 196 aa12.18□□□□□ -0.46
CTDNEP1-207ENST00000572043 PAGE4O60829 102 aa12.18□□□□□ -0.46
CTDNEP1-207ENST00000572043 PFDN1O60925 122 aa12.18□□□□□ -0.46
CTDNEP1-207ENST00000572043 ORM1P02763 201 aa12.18□□□□□ -0.46
CTDNEP1-207ENST00000572043 RNASE3P12724 160 aaKnown RBP12.18□□□□□ -0.46
CTDNEP1-207ENST00000572043 S100A4P26447 101 aaKnown RBP12.18□□□□□ -0.46
CTDNEP1-207ENST00000572043 A0A1W2PPQ1 181 aa12.17□□□□□ -0.46
CTDNEP1-207ENST00000572043 FABP5P3A8MUU1 101 aa12.17□□□□□ -0.46
CTDNEP1-207ENST00000572043 M0R036 132 aa12.17□□□□□ -0.46
CTDNEP1-207ENST00000572043 GATA1P15976 413 aaPredicted RBP12.17□□□□□ -0.46
CTDNEP1-207ENST00000572043 UBE2G1P62253 170 aa12.17□□□□□ -0.46
CTDNEP1-207ENST00000572043 ZNF506Q5JVG8 444 aa12.17□□□□□ -0.46
CTDNEP1-207ENST00000572043 CFAP126Q5VTH2 177 aa12.17□□□□□ -0.46
CTDNEP1-207ENST00000572043 TMUB2Q71RG4 321 aa12.17□□□□□ -0.46
CTDNEP1-207ENST00000572043 NHLRC2Q8NBF2 726 aa12.17□□□□□ -0.46
CTDNEP1-207ENST00000572043 ZC2HC1AQ96GY0 325 aa12.17□□□□□ -0.46
CTDNEP1-207ENST00000572043 DNAH17Q9UFH2 4485 aa12.17□□□□□ -0.46
CTDNEP1-207ENST00000572043 RS1O15537 224 aa12.16□□□□□ -0.46
CTDNEP1-207ENST00000572043 ASIPP42127 132 aa12.16□□□□□ -0.46
CTDNEP1-207ENST00000572043 AKR1C3P42330 323 aa12.16□□□□□ -0.46
CTDNEP1-207ENST00000572043 CRIP1P50238 77 aa12.16□□□□□ -0.46
CTDNEP1-207ENST00000572043 LINC00315P59091 139 aa12.16□□□□□ -0.46
CTDNEP1-207ENST00000572043 FMC1Q96HJ9 113 aa12.16□□□□□ -0.46
CTDNEP1-207ENST00000572043 TXNDC17Q9BRA2 123 aa12.16□□□□□ -0.46
CTDNEP1-207ENST00000572043 B4DEV8 164 aa12.15□□□□□ -0.46
CTDNEP1-207ENST00000572043 UMAD1C9J7I0 102 aa12.15□□□□□ -0.46
CTDNEP1-207ENST00000572043 SH2D1AO60880 128 aa12.15□□□□□ -0.46
CTDNEP1-207ENST00000572043 WFDC10BQ8IUB3 73 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms