RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 Q6ZRN7 208 aaPredicted RBP9.5□□□□□ -0.89
GTF3C1-211ENST00000569653 GOLT1AQ6ZVE7 132 aa9.5□□□□□ -0.89
GTF3C1-211ENST00000569653 SPATA12Q7Z6I5 190 aa9.5□□□□□ -0.89
GTF3C1-211ENST00000569653 STOML3Q8TAV4 291 aa9.5□□□□□ -0.89
GTF3C1-211ENST00000569653 SUN5Q8TC36 379 aa9.5□□□□□ -0.89
GTF3C1-211ENST00000569653 TRGV2A0A075B6R0 118 aa9.49□□□□□ -0.89
GTF3C1-211ENST00000569653 RGS13O14921 159 aa9.49□□□□□ -0.89
GTF3C1-211ENST00000569653 CDK2AP2O75956 126 aa9.49□□□□□ -0.89
GTF3C1-211ENST00000569653 IGHV3-53P01767 116 aa9.49□□□□□ -0.89
GTF3C1-211ENST00000569653 SEC11BP0C7V7 166 aa9.49□□□□□ -0.89
GTF3C1-211ENST00000569653 FHITP49789 147 aa9.49□□□□□ -0.89
GTF3C1-211ENST00000569653 C5orf17Q8NAS9 161 aa9.49□□□□□ -0.89
GTF3C1-211ENST00000569653 IGHV1OR15-1A0A075B7D0 117 aa9.48□□□□□ -0.89
GTF3C1-211ENST00000569653 K7EQM0 130 aa9.48□□□□□ -0.89
GTF3C1-211ENST00000569653 GNG5P63218 68 aa9.48□□□□□ -0.89
GTF3C1-211ENST00000569653 IBA57Q5T440 356 aaKnown RBP9.48□□□□□ -0.89
GTF3C1-211ENST00000569653 A0A1W2PRE2 83 aa9.47□□□□□ -0.89
GTF3C1-211ENST00000569653 TPT1P13693 172 aaKnown RBP9.47□□□□□ -0.89
GTF3C1-211ENST00000569653 FUSP35637 526 aaKnown RBP eCLIP9.47□□□□□ -0.89
GTF3C1-211ENST00000569653 LINC00315P59091 139 aa9.47□□□□□ -0.89
GTF3C1-211ENST00000569653 FHL2Q14192 279 aa9.47□□□□□ -0.89
GTF3C1-211ENST00000569653 MUC21Q5SSG8 566 aa9.47□□□□□ -0.89
GTF3C1-211ENST00000569653 NDFIP1Q9BT67 221 aa9.47□□□□□ -0.89
GTF3C1-211ENST00000569653 MDFICQ9P1T7 246 aa9.47□□□□□ -0.89
GTF3C1-211ENST00000569653 BOLA1Q9Y3E2 137 aa9.47□□□□□ -0.89
GTF3C1-211ENST00000569653 TNFRSF18Q9Y5U5 241 aa9.47□□□□□ -0.89
GTF3C1-211ENST00000569653 MAP1LC3B2A6NCE7 125 aa9.46□□□□□ -0.9
GTF3C1-211ENST00000569653 GGTLC3B5MD39 225 aa9.46□□□□□ -0.9
GTF3C1-211ENST00000569653 TCRAP04437 139 aa9.46□□□□□ -0.9
GTF3C1-211ENST00000569653 SUMO1P63165 101 aaKnown RBP9.46□□□□□ -0.9
GTF3C1-211ENST00000569653 EIF5AP63241 154 aaKnown RBP9.46□□□□□ -0.9
GTF3C1-211ENST00000569653 TTC32Q5I0X7 151 aa9.46□□□□□ -0.9
GTF3C1-211ENST00000569653 Q6AWC8 147 aa9.46□□□□□ -0.9
GTF3C1-211ENST00000569653 MAP1LC3BQ9GZQ8 125 aa9.46□□□□□ -0.9
GTF3C1-211ENST00000569653 FAT1Q14517 4588 aa9.46□□□□□ -0.9
GTF3C1-211ENST00000569653 TRAV8-1A0A0A6YYK1 113 aa9.45□□□□□ -0.9
GTF3C1-211ENST00000569653 A0A1W2PPQ1 181 aa9.45□□□□□ -0.9
GTF3C1-211ENST00000569653 FBLL1A6NHQ2 334 aaKnown RBP9.45□□□□□ -0.9
GTF3C1-211ENST00000569653 UMAD1C9J7I0 102 aa9.45□□□□□ -0.9
GTF3C1-211ENST00000569653 CRYBA4P53673 196 aa9.45□□□□□ -0.9
GTF3C1-211ENST00000569653 ZNF415Q09FC8 603 aa9.45□□□□□ -0.9
GTF3C1-211ENST00000569653 FAM159AQ6UWV7 190 aa9.45□□□□□ -0.9
GTF3C1-211ENST00000569653 SLC51BQ86UW2 128 aa9.45□□□□□ -0.9
GTF3C1-211ENST00000569653 MAPKAPK5-AS1Q8N8E1 139 aa9.45□□□□□ -0.9
GTF3C1-211ENST00000569653 CYB561D1Q8N8Q1 229 aa9.45□□□□□ -0.9
GTF3C1-211ENST00000569653 C8orf49Q96NF6 230 aa9.45□□□□□ -0.9
GTF3C1-211ENST00000569653 TREM1Q9NP99 234 aa9.45□□□□□ -0.9
GTF3C1-211ENST00000569653 EPDR1Q9UM22 224 aa9.45□□□□□ -0.9
GTF3C1-211ENST00000569653 TRAV21A0A0B4J279 112 aa9.44□□□□□ -0.9
GTF3C1-211ENST00000569653 F6UZH7 168 aa9.44□□□□□ -0.9
GTF3C1-211ENST00000569653 PAX4O43316 350 aa9.44□□□□□ -0.9
GTF3C1-211ENST00000569653 NXPH4O95158 308 aa9.44□□□□□ -0.9
GTF3C1-211ENST00000569653 SFTA3P0C7M3 94 aa9.44□□□□□ -0.9
GTF3C1-211ENST00000569653 BTF3P20290 206 aaKnown RBP9.44□□□□□ -0.9
GTF3C1-211ENST00000569653 FGF8P55075 233 aaPredicted RBP9.44□□□□□ -0.9
GTF3C1-211ENST00000569653 TMEM75Q8N9X5 138 aa9.44□□□□□ -0.9
GTF3C1-211ENST00000569653 TVP23CQ96ET8 276 aa9.44□□□□□ -0.9
GTF3C1-211ENST00000569653 NKX6-2Q9C056 277 aaPredicted RBP9.44□□□□□ -0.9
GTF3C1-211ENST00000569653 TRGV11A0A075B6L2 103 aa9.43□□□□□ -0.9
GTF3C1-211ENST00000569653 IFNA7P01567 189 aa9.43□□□□□ -0.9
GTF3C1-211ENST00000569653 UBE2G2P60604 165 aa9.43□□□□□ -0.9
GTF3C1-211ENST00000569653 FAM213BQ8TBF2 198 aa9.43□□□□□ -0.9
GTF3C1-211ENST00000569653 MBD3L1Q8WWY6 194 aa9.43□□□□□ -0.9
GTF3C1-211ENST00000569653 ZNF479Q96JC4 524 aa9.43□□□□□ -0.9
GTF3C1-211ENST00000569653 PRO0255Q9UI72 69 aa9.43□□□□□ -0.9
GTF3C1-211ENST00000569653 NAGKQ9UJ70 344 aa9.43□□□□□ -0.9
GTF3C1-211ENST00000569653 ICOSQ9Y6W8 199 aa9.43□□□□□ -0.9
GTF3C1-211ENST00000569653 FAM74A7A6NL05 159 aa9.42□□□□□ -0.9
GTF3C1-211ENST00000569653 SIVA1O15304 175 aa9.42□□□□□ -0.9
GTF3C1-211ENST00000569653 PPT1P50897 306 aa9.42□□□□□ -0.9
GTF3C1-211ENST00000569653 FLI1Q01543 452 aaPredicted RBP9.42□□□□□ -0.9
GTF3C1-211ENST00000569653 TMEM183BQ1AE95 376 aa9.42□□□□□ -0.9
GTF3C1-211ENST00000569653 TDRG1Q3Y452 100 aa9.42□□□□□ -0.9
GTF3C1-211ENST00000569653 LYPD5Q6UWN5 251 aa9.42□□□□□ -0.9
GTF3C1-211ENST00000569653 DPPA3Q6W0C5 159 aa9.42□□□□□ -0.9
GTF3C1-211ENST00000569653 TMEM183AQ8IXX5 376 aa9.42□□□□□ -0.9
GTF3C1-211ENST00000569653 SGK494Q96LW2 274 aa9.42□□□□□ -0.9
GTF3C1-211ENST00000569653 PSG8Q9UQ74 426 aa9.42□□□□□ -0.9
GTF3C1-211ENST00000569653 HHLA3Q9XRX5 114 aa9.42□□□□□ -0.9
GTF3C1-211ENST00000569653 PEX7O00628 323 aa9.41□□□□□ -0.9
GTF3C1-211ENST00000569653 SULT1A2P50226 295 aa9.41□□□□□ -0.9
GTF3C1-211ENST00000569653 PRNTQ86SH4 94 aa9.41□□□□□ -0.9
GTF3C1-211ENST00000569653 HIST1H2BAQ96A08 127 aa9.41□□□□□ -0.9
GTF3C1-211ENST00000569653 TCEAL7Q9BRU2 100 aa9.41□□□□□ -0.9
GTF3C1-211ENST00000569653 ARL2-SNX15V9GYD0 113 aa9.41□□□□□ -0.9
GTF3C1-211ENST00000569653 K7EQD1 137 aa9.4□□□□□ -0.9
GTF3C1-211ENST00000569653 GNRH2O43555 120 aa9.4□□□□□ -0.9
GTF3C1-211ENST00000569653 IGLV2-11P01706 119 aa9.4□□□□□ -0.9
GTF3C1-211ENST00000569653 SMUG1Q53HV7 270 aa9.4□□□□□ -0.9
GTF3C1-211ENST00000569653 SAPCD1Q5SSQ6 148 aa9.4□□□□□ -0.9
GTF3C1-211ENST00000569653 EIF5AL1Q6IS14 154 aaKnown RBP9.4□□□□□ -0.9
GTF3C1-211ENST00000569653 WFDC10BQ8IUB3 73 aa9.4□□□□□ -0.9
GTF3C1-211ENST00000569653 Q8N1X5 172 aa9.4□□□□□ -0.9
GTF3C1-211ENST00000569653 SFT2D1Q8WV19 159 aa9.4□□□□□ -0.9
GTF3C1-211ENST00000569653 RASL10AQ92737 203 aa9.4□□□□□ -0.9
GTF3C1-211ENST00000569653 KCNS1Q96KK3 526 aa9.4□□□□□ -0.9
GTF3C1-211ENST00000569653 SDF2L1Q9HCN8 221 aa9.4□□□□□ -0.9
GTF3C1-211ENST00000569653 IGHV3-16A0A0C4DH30 117 aa9.39□□□□□ -0.91
GTF3C1-211ENST00000569653 LOC100131303A0A0U1RQF7 123 aa9.39□□□□□ -0.91
GTF3C1-211ENST00000569653 GCGP01275 180 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms