RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 TRBV12-3P01733 135 aa13.13□□□□□ -0.31
VAC14-210ENST00000568548 IGHV3-11P01762 117 aa13.13□□□□□ -0.31
VAC14-210ENST00000568548 EMP1P54849 157 aa13.13□□□□□ -0.31
VAC14-210ENST00000568548 H3BMG7 143 aa13.13□□□□□ -0.31
VAC14-210ENST00000568548 DPM2O94777 84 aa13.13□□□□□ -0.31
VAC14-210ENST00000568548 WFDC2Q14508 124 aa13.13□□□□□ -0.31
VAC14-210ENST00000568548 BRD3OSQ6XYD6 125 aa13.13□□□□□ -0.31
VAC14-210ENST00000568548 MYOZ3Q8TDC0 251 aa13.13□□□□□ -0.31
VAC14-210ENST00000568548 HIST1H4GQ99525 98 aa13.13□□□□□ -0.31
VAC14-210ENST00000568548 UBTD1Q9HAC8 227 aa13.13□□□□□ -0.31
VAC14-210ENST00000568548 GNLYP22749 145 aa13.12□□□□□ -0.31
VAC14-210ENST00000568548 TMEM78Q5T7P6 136 aa13.12□□□□□ -0.31
VAC14-210ENST00000568548 TMEM238C9JI98 176 aa13.12□□□□□ -0.31
VAC14-210ENST00000568548 ZFYVE26Q68DK2 2539 aa13.12□□□□□ -0.31
VAC14-210ENST00000568548 CFAP46Q8IYW2 2715 aa13.12□□□□□ -0.31
VAC14-210ENST00000568548 TRAV8-2A0A0B4J237 113 aa13.12□□□□□ -0.31
VAC14-210ENST00000568548 MGPP08493 103 aa13.12□□□□□ -0.31
VAC14-210ENST00000568548 SMAGPQ0VAQ4 97 aa13.12□□□□□ -0.31
VAC14-210ENST00000568548 C8orf86Q6ZUL3 223 aa13.12□□□□□ -0.31
VAC14-210ENST00000568548 ZNF502Q8TBZ5 544 aa13.12□□□□□ -0.31
VAC14-210ENST00000568548 ZFAND3Q9H8U3 227 aa13.12□□□□□ -0.31
VAC14-210ENST00000568548 MYO9AB2RTY4 2548 aa13.11□□□□□ -0.31
VAC14-210ENST00000568548 NXT2Q9NPJ8 142 aaKnown RBP13.11□□□□□ -0.31
VAC14-210ENST00000568548 CCDC144NLQ6NUI1 221 aa13.11□□□□□ -0.31
VAC14-210ENST00000568548 C16orf92Q96LL3 132 aa13.11□□□□□ -0.31
VAC14-210ENST00000568548 FAM208BQ5VWN6 2430 aa13.11□□□□□ -0.31
VAC14-210ENST00000568548 RPL39LQ96EH5 51 aaKnown RBP13.1□□□□□ -0.31
VAC14-210ENST00000568548 CYSLTR1Q9Y271 337 aa13.1□□□□□ -0.31
VAC14-210ENST00000568548 C2CD3Q4AC94 2353 aa13.1□□□□□ -0.31
VAC14-210ENST00000568548 LY6EQ16553 131 aa13.1□□□□□ -0.31
VAC14-210ENST00000568548 ETDBQ3ZM63 59 aa13.1□□□□□ -0.31
VAC14-210ENST00000568548 C14orf178Q8N769 122 aaPredicted RBP13.1□□□□□ -0.31
VAC14-210ENST00000568548 ITLN2Q8WWU7 325 aaPredicted RBP13.1□□□□□ -0.31
VAC14-210ENST00000568548 UNQ9165/PRO28630Q6UXU0 137 aa13.09□□□□□ -0.31
VAC14-210ENST00000568548 Q8N6K4 173 aa13.09□□□□□ -0.31
VAC14-210ENST00000568548 C20orf173Q96LM9 149 aa13.09□□□□□ -0.31
VAC14-210ENST00000568548 M0R1W7 72 aa13.09□□□□□ -0.31
VAC14-210ENST00000568548 S100A4P26447 101 aaKnown RBP13.09□□□□□ -0.31
VAC14-210ENST00000568548 SCGB2A2Q13296 93 aa13.09□□□□□ -0.31
VAC14-210ENST00000568548 DPF1Q92782 380 aa13.09□□□□□ -0.31
VAC14-210ENST00000568548 BPESC1Q9GZL8 116 aa13.09□□□□□ -0.31
VAC14-210ENST00000568548 ACACBO00763 2458 aa13.08□□□□□ -0.32
VAC14-210ENST00000568548 LAGE3Q14657 143 aa13.08□□□□□ -0.32
VAC14-210ENST00000568548 ABCA2Q9BZC7 2435 aa13.08□□□□□ -0.32
VAC14-210ENST00000568548 IGHV7-4-1A0A0J9YVY3 117 aa13.08□□□□□ -0.32
VAC14-210ENST00000568548 TGFAP01135 160 aa13.08□□□□□ -0.32
VAC14-210ENST00000568548 CEND1Q8N111 149 aa13.08□□□□□ -0.32
VAC14-210ENST00000568548 ZNF479Q96JC4 524 aa13.08□□□□□ -0.32
VAC14-210ENST00000568548 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.07□□□□□ -0.32
VAC14-210ENST00000568548 C19orf84I3L1E1 186 aa13.07□□□□□ -0.32
VAC14-210ENST00000568548 SCGB2A1O75556 95 aa13.07□□□□□ -0.32
VAC14-210ENST00000568548 Q8N8P6 123 aa13.07□□□□□ -0.32
VAC14-210ENST00000568548 PSMG3-AS1Q96PY0 264 aa13.07□□□□□ -0.32
VAC14-210ENST00000568548 SIVA1O15304 175 aa13.07□□□□□ -0.32
VAC14-210ENST00000568548 GNRH2O43555 120 aa13.06□□□□□ -0.32
VAC14-210ENST00000568548 EDN2P20800 178 aa13.06□□□□□ -0.32
VAC14-210ENST00000568548 LINC01559Q495D7 138 aa13.06□□□□□ -0.32
VAC14-210ENST00000568548 OR5A1Q8NGJ0 315 aa13.06□□□□□ -0.32
VAC14-210ENST00000568548 METTL26Q96S19 204 aa13.06□□□□□ -0.32
VAC14-210ENST00000568548 NRACQ8N912 160 aa13.06□□□□□ -0.32
VAC14-210ENST00000568548 TSSC4Q9Y5U2 329 aaPredicted RBP13.06□□□□□ -0.32
VAC14-210ENST00000568548 AJUBAQ96IF1 538 aa13.06□□□□□ -0.32
VAC14-210ENST00000568548 IGLV2-18A0A075B6J9 118 aa13.05□□□□□ -0.32
VAC14-210ENST00000568548 RNASE4P34096 147 aaKnown RBP13.05□□□□□ -0.32
VAC14-210ENST00000568548 INSL3P51460 131 aa13.05□□□□□ -0.32
VAC14-210ENST00000568548 SCGB3A1Q96QR1 104 aa13.05□□□□□ -0.32
VAC14-210ENST00000568548 IGSF10Q6WRI0 2623 aa13.05□□□□□ -0.32
VAC14-210ENST00000568548 FAM110DQ8TAY7 271 aaPredicted RBP13.04□□□□□ -0.32
VAC14-210ENST00000568548 SIRPDQ9H106 197 aa13.04□□□□□ -0.32
VAC14-210ENST00000568548 JPT2Q9H910 190 aa13.04□□□□□ -0.32
VAC14-210ENST00000568548 IGLL5B9A064 214 aa13.04□□□□□ -0.32
VAC14-210ENST00000568548 ATP5LO75964 103 aa13.04□□□□□ -0.32
VAC14-210ENST00000568548 ARL3P36405 182 aa13.04□□□□□ -0.32
VAC14-210ENST00000568548 C12orf74Q32Q52 190 aa13.04□□□□□ -0.32
VAC14-210ENST00000568548 ZNF48Q96MX3 618 aaPredicted RBP13.04□□□□□ -0.32
VAC14-210ENST00000568548 KLHL30-AS1Q8NEE0 82 aa13.03□□□□□ -0.32
VAC14-210ENST00000568548 IGKV3-20P01619 116 aa13.03□□□□□ -0.32
VAC14-210ENST00000568548 AZU1P20160 251 aa13.03□□□□□ -0.32
VAC14-210ENST00000568548 PTPN13Q12923 2485 aa13.03□□□□□ -0.32
VAC14-210ENST00000568548 SAMD13Q5VXD3 122 aa13.02□□□□□ -0.32
VAC14-210ENST00000568548 Q6ZS46 218 aa13.02□□□□□ -0.32
VAC14-210ENST00000568548 COX8CQ7Z4L0 72 aa13.02□□□□□ -0.32
VAC14-210ENST00000568548 CD300EQ496F6 205 aaPredicted RBP13.02□□□□□ -0.33
VAC14-210ENST00000568548 SCGB1D4Q6XE38 83 aa13.02□□□□□ -0.33
VAC14-210ENST00000568548 CNFNQ9BYD5 112 aa13.02□□□□□ -0.33
VAC14-210ENST00000568548 ZMAT4Q9H898 229 aa13.02□□□□□ -0.33
VAC14-210ENST00000568548 ATP5G2Q06055 141 aa13.02□□□□□ -0.33
VAC14-210ENST00000568548 SRSF1Q07955 248 aaKnown RBP eCLIP13.02□□□□□ -0.33
VAC14-210ENST00000568548 PHLDA1Q8WV24 401 aaPredicted RBP13.02□□□□□ -0.33
VAC14-210ENST00000568548 ABCA12Q86UK0 2595 aa13.01□□□□□ -0.33
VAC14-210ENST00000568548 LOC107984156A0A0G2JMH3 177 aa13.01□□□□□ -0.33
VAC14-210ENST00000568548 OR11H12B2RN74 326 aa13.01□□□□□ -0.33
VAC14-210ENST00000568548 APOMO95445 188 aa13.01□□□□□ -0.33
VAC14-210ENST00000568548 ARL17AQ8IVW1 177 aa13.01□□□□□ -0.33
VAC14-210ENST00000568548 OR11H1Q8NG94 326 aa13.01□□□□□ -0.33
VAC14-210ENST00000568548 OR11H2Q8NH07 326 aa13.01□□□□□ -0.33
VAC14-210ENST00000568548 EEF1AKMT3Q96AZ1 226 aa13.01□□□□□ -0.33
VAC14-210ENST00000568548 CHTOPQ9Y3Y2 248 aaKnown RBP13.01□□□□□ -0.33
VAC14-210ENST00000568548 PHLDA3Q9Y5J5 127 aa13.01□□□□□ -0.33
VAC14-210ENST00000568548 MXRA5Q9NR99 2828 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms