RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 OR10G7Q8NGN6 311 aa12.86□□□□□ -0.35
LINC01238-205ENST00000567549 LENEPQ9Y5L5 61 aa12.86□□□□□ -0.35
LINC01238-205ENST00000567549 PKD1P98161 4303 aa12.86□□□□□ -0.35
LINC01238-205ENST00000567549 DNAH11Q96DT5 4516 aa12.85□□□□□ -0.35
LINC01238-205ENST00000567549 IGKV2-40A0A087WW87 121 aaPredicted RBP12.85□□□□□ -0.35
LINC01238-205ENST00000567549 IGKV2D-40P01614 121 aaPredicted RBP12.85□□□□□ -0.35
LINC01238-205ENST00000567549 KHDC3LQ587J8 217 aa12.85□□□□□ -0.35
LINC01238-205ENST00000567549 MIR17HGQ75NE6 70 aa12.85□□□□□ -0.35
LINC01238-205ENST00000567549 NFE4Q86UQ8 179 aa12.85□□□□□ -0.35
LINC01238-205ENST00000567549 SFT2D1Q8WV19 159 aa12.85□□□□□ -0.35
LINC01238-205ENST00000567549 VSIG2Q96IQ7 327 aa12.85□□□□□ -0.35
LINC01238-205ENST00000567549 KLF12Q9Y4X4 402 aa12.85□□□□□ -0.35
LINC01238-205ENST00000567549 GCSAMLQ5JQS6 135 aa12.84□□□□□ -0.35
LINC01238-205ENST00000567549 ZFAND2AQ8N6M9 145 aa12.84□□□□□ -0.35
LINC01238-205ENST00000567549 TRGV11A0A075B6L2 103 aa12.83□□□□□ -0.36
LINC01238-205ENST00000567549 CTXND1A0A1B0GTU2 59 aa12.83□□□□□ -0.36
LINC01238-205ENST00000567549 UBE2L3P68036 154 aaKnown RBP12.83□□□□□ -0.36
LINC01238-205ENST00000567549 FAM167A-AS1Q96KT0 104 aa12.83□□□□□ -0.36
LINC01238-205ENST00000567549 SPXQ9BT56 116 aa12.83□□□□□ -0.36
LINC01238-205ENST00000567549 HHLA3Q9XRX5 114 aa12.83□□□□□ -0.36
LINC01238-205ENST00000567549 DYNC1H1Q14204 4646 aaKnown RBP12.82□□□□□ -0.36
LINC01238-205ENST00000567549 TRGV4A0A0C4DH28 118 aa12.82□□□□□ -0.36
LINC01238-205ENST00000567549 A0A1W2PPV4 95 aa12.82□□□□□ -0.36
LINC01238-205ENST00000567549 OR10J4P0C629 311 aa12.82□□□□□ -0.36
LINC01238-205ENST00000567549 ERVFC1-1P60608 527 aa12.82□□□□□ -0.36
LINC01238-205ENST00000567549 PEA15Q15121 130 aa12.82□□□□□ -0.36
LINC01238-205ENST00000567549 FAM159AQ6UWV7 190 aa12.82□□□□□ -0.36
LINC01238-205ENST00000567549 NEGR1Q7Z3B1 354 aa12.82□□□□□ -0.36
LINC01238-205ENST00000567549 CMTM2Q8TAZ6 248 aa12.82□□□□□ -0.36
LINC01238-205ENST00000567549 FXYD5Q96DB9 178 aa12.82□□□□□ -0.36
LINC01238-205ENST00000567549 SMDT1Q9H4I9 107 aa12.82□□□□□ -0.36
LINC01238-205ENST00000567549 KRBOX1C9JBD0 128 aa12.81□□□□□ -0.36
LINC01238-205ENST00000567549 NXPH4O95158 308 aa12.81□□□□□ -0.36
LINC01238-205ENST00000567549 ORM1P02763 201 aa12.81□□□□□ -0.36
LINC01238-205ENST00000567549 RANP62826 216 aaKnown RBP12.81□□□□□ -0.36
LINC01238-205ENST00000567549 KRTAP1-5Q9BYS1 174 aa12.81□□□□□ -0.36
LINC01238-205ENST00000567549 MRPL16Q9NX20 251 aaKnown RBP12.81□□□□□ -0.36
LINC01238-205ENST00000567549 PGPEP1Q9NXJ5 209 aa12.81□□□□□ -0.36
LINC01238-205ENST00000567549 RYR1P21817 5038 aa12.81□□□□□ -0.36
LINC01238-205ENST00000567549 MAP1LC3B2A6NCE7 125 aa12.8□□□□□ -0.36
LINC01238-205ENST00000567549 SRIP30626 198 aa12.8□□□□□ -0.36
LINC01238-205ENST00000567549 CDC34P49427 236 aaPredicted RBP12.8□□□□□ -0.36
LINC01238-205ENST00000567549 LINC00315P59091 139 aa12.8□□□□□ -0.36
LINC01238-205ENST00000567549 LCE2DQ5TA82 110 aaPredicted RBP12.8□□□□□ -0.36
LINC01238-205ENST00000567549 CDPF1Q6NVV7 123 aa12.8□□□□□ -0.36
LINC01238-205ENST00000567549 ARL6IP6Q8N6S5 226 aa12.8□□□□□ -0.36
LINC01238-205ENST00000567549 FAM210AQ96ND0 272 aa12.8□□□□□ -0.36
LINC01238-205ENST00000567549 MAP1LC3BQ9GZQ8 125 aa12.8□□□□□ -0.36
LINC01238-205ENST00000567549 IGHV3-53P01767 116 aa12.79□□□□□ -0.36
LINC01238-205ENST00000567549 TAGLN2P37802 199 aaKnown RBP12.79□□□□□ -0.36
LINC01238-205ENST00000567549 PPT1P50897 306 aa12.79□□□□□ -0.36
LINC01238-205ENST00000567549 CRYBA4P53673 196 aa12.79□□□□□ -0.36
LINC01238-205ENST00000567549 ZNF726P1Q15940 193 aa12.79□□□□□ -0.36
LINC01238-205ENST00000567549 SH2D6Q7Z4S9 175 aa12.79□□□□□ -0.36
LINC01238-205ENST00000567549 IQCF2Q8IXL9 164 aa12.79□□□□□ -0.36
LINC01238-205ENST00000567549 RAB24Q969Q5 203 aa12.79□□□□□ -0.36
LINC01238-205ENST00000567549 TXNDC17Q9BRA2 123 aa12.79□□□□□ -0.36
LINC01238-205ENST00000567549 TREM1Q9NP99 234 aa12.79□□□□□ -0.36
LINC01238-205ENST00000567549 LY96Q9Y6Y9 160 aa12.79□□□□□ -0.36
LINC01238-205ENST00000567549 C9JCJ5 164 aa12.78□□□□□ -0.36
LINC01238-205ENST00000567549 IFNA1P01562 189 aa12.78□□□□□ -0.36
LINC01238-205ENST00000567549 Q6AWC8 147 aa12.78□□□□□ -0.36
LINC01238-205ENST00000567549 Q8N1X5 172 aa12.78□□□□□ -0.36
LINC01238-205ENST00000567549 Q8TAT8 98 aa12.78□□□□□ -0.36
LINC01238-205ENST00000567549 C8orf49Q96NF6 230 aa12.78□□□□□ -0.36
LINC01238-205ENST00000567549 EIF5A2Q9GZV4 153 aaKnown RBP12.78□□□□□ -0.36
LINC01238-205ENST00000567549 TP53TG3Q9ULZ0 132 aa12.78□□□□□ -0.36
LINC01238-205ENST00000567549 RBFOX3A6NFN3 312 aa12.77□□□□□ -0.37
LINC01238-205ENST00000567549 EVI2AP22794 236 aa12.77□□□□□ -0.37
LINC01238-205ENST00000567549 PQLC2Q6ZP29 291 aa12.77□□□□□ -0.37
LINC01238-205ENST00000567549 RASL10AQ92737 203 aa12.77□□□□□ -0.37
LINC01238-205ENST00000567549 OTORQ9NRC9 128 aa12.77□□□□□ -0.37
LINC01238-205ENST00000567549 DIRC3C9JPN6 131 aa12.76□□□□□ -0.37
LINC01238-205ENST00000567549 CCL20P78556 96 aa12.76□□□□□ -0.37
LINC01238-205ENST00000567549 FHL2Q14192 279 aa12.76□□□□□ -0.37
LINC01238-205ENST00000567549 MUC21Q5SSG8 566 aa12.76□□□□□ -0.37
LINC01238-205ENST00000567549 PRR9Q5T870 116 aa12.76□□□□□ -0.37
LINC01238-205ENST00000567549 LYPD5Q6UWN5 251 aa12.76□□□□□ -0.37
LINC01238-205ENST00000567549 C10orf126Q8N4M7 172 aa12.76□□□□□ -0.37
LINC01238-205ENST00000567549 KCNS1Q96KK3 526 aa12.76□□□□□ -0.37
LINC01238-205ENST00000567549 A0A1B0GV50 99 aa12.75□□□□□ -0.37
LINC01238-205ENST00000567549 TMEM218A2RU14 115 aa12.75□□□□□ -0.37
LINC01238-205ENST00000567549 CXorf1O96002 111 aa12.75□□□□□ -0.37
LINC01238-205ENST00000567549 TMEM183BQ1AE95 376 aa12.75□□□□□ -0.37
LINC01238-205ENST00000567549 TMEM183AQ8IXX5 376 aa12.75□□□□□ -0.37
LINC01238-205ENST00000567549 NDFIP1Q9BT67 221 aa12.75□□□□□ -0.37
LINC01238-205ENST00000567549 TRAV21A0A0B4J279 112 aa12.74□□□□□ -0.37
LINC01238-205ENST00000567549 SERTM2A0A1B0GWG4 89 aa12.74□□□□□ -0.37
LINC01238-205ENST00000567549 NDUFS6O75380 124 aaKnown RBP12.74□□□□□ -0.37
LINC01238-205ENST00000567549 STAG3L2P0CL84 134 aa12.74□□□□□ -0.37
LINC01238-205ENST00000567549 STAG3L3P0CL85 134 aa12.74□□□□□ -0.37
LINC01238-205ENST00000567549 FGF8P55075 233 aaPredicted RBP12.74□□□□□ -0.37
LINC01238-205ENST00000567549 TDRG1Q3Y452 100 aa12.74□□□□□ -0.37
LINC01238-205ENST00000567549 TOR2AQ5JU69 321 aa12.74□□□□□ -0.37
LINC01238-205ENST00000567549 ZNF506Q5JVG8 444 aa12.74□□□□□ -0.37
LINC01238-205ENST00000567549 SCRT2Q9NQ03 307 aa12.74□□□□□ -0.37
LINC01238-205ENST00000567549 MANBALQ9NQG1 85 aa12.74□□□□□ -0.37
LINC01238-205ENST00000567549 GNG13Q9P2W3 67 aa12.74□□□□□ -0.37
LINC01238-205ENST00000567549 TRAV4A0A0B4J268 109 aa12.73□□□□□ -0.37
LINC01238-205ENST00000567549 K7EQM0 130 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms