RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 LYPD6BQ8NI32 183 aa18.54■□□□□ 0.56
NME3-209ENST00000566600 C11orf52Q96A22 123 aa18.54■□□□□ 0.56
NME3-209ENST00000566600 IGLL5B9A064 214 aa18.53■□□□□ 0.56
NME3-209ENST00000566600 ATP5G1P05496 136 aa18.52■□□□□ 0.56
NME3-209ENST00000566600 HTN3P15516 51 aa18.52■□□□□ 0.56
NME3-209ENST00000566600 LGALS9BQ3B8N2 356 aa18.52■□□□□ 0.56
NME3-209ENST00000566600 FAM210BQ96KR6 192 aa18.52■□□□□ 0.56
NME3-209ENST00000566600 SPXQ9BT56 116 aa18.52■□□□□ 0.56
NME3-209ENST00000566600 GAGE12BA1L429 117 aa18.51■□□□□ 0.55
NME3-209ENST00000566600 SPINK4O60575 86 aa18.51■□□□□ 0.55
NME3-209ENST00000566600 GAGE7O76087 117 aa18.51■□□□□ 0.55
NME3-209ENST00000566600 GAGE12FP0CL80 117 aa18.51■□□□□ 0.55
NME3-209ENST00000566600 GAGE12GP0CL81 117 aa18.51■□□□□ 0.55
NME3-209ENST00000566600 GAGE12IP0CL82 117 aa18.51■□□□□ 0.55
NME3-209ENST00000566600 TEX261Q6UWH6 196 aa18.51■□□□□ 0.55
NME3-209ENST00000566600 ZC2HC1AQ96GY0 325 aa18.51■□□□□ 0.55
NME3-209ENST00000566600 MDFICQ9P1T7 246 aa18.51■□□□□ 0.55
NME3-209ENST00000566600 TRGV1A0A0A0MS02 117 aa18.5■□□□□ 0.55
NME3-209ENST00000566600 RPL35P42766 123 aaKnown RBP18.5■□□□□ 0.55
NME3-209ENST00000566600 FAM162BQ5T6X4 162 aa18.5■□□□□ 0.55
NME3-209ENST00000566600 Q6ZTI0 123 aa18.5■□□□□ 0.55
NME3-209ENST00000566600 BAGE2Q86Y30 109 aa18.5■□□□□ 0.55
NME3-209ENST00000566600 IGHV3-16A0A0C4DH30 117 aa18.49■□□□□ 0.55
NME3-209ENST00000566600 GNRH2O43555 120 aa18.49■□□□□ 0.55
NME3-209ENST00000566600 TYMSP04818 313 aa18.49■□□□□ 0.55
NME3-209ENST00000566600 C11orf21Q9P2W6 132 aa18.49■□□□□ 0.55
NME3-209ENST00000566600 IGHV4-4A0A075B6R2 117 aa18.48■□□□□ 0.55
NME3-209ENST00000566600 C18orf15Q96N68 181 aa18.48■□□□□ 0.55
NME3-209ENST00000566600 MED9Q9NWA0 146 aa18.48■□□□□ 0.55
NME3-209ENST00000566600 TRGV2A0A075B6R0 118 aa18.47■□□□□ 0.55
NME3-209ENST00000566600 RBFOX3A6NFN3 312 aa18.47■□□□□ 0.55
NME3-209ENST00000566600 NDUFAF3Q9BU61 184 aa18.47■□□□□ 0.55
NME3-209ENST00000566600 LCE6AA0A183 80 aa18.46■□□□□ 0.55
NME3-209ENST00000566600 ZNF674Q2M3X9 581 aa18.46■□□□□ 0.55
NME3-209ENST00000566600 MLST8Q9BVC4 326 aa18.46■□□□□ 0.55
NME3-209ENST00000566600 DYNC2H1Q8NCM8 4307 aaKnown RBP18.46■□□□□ 0.55
NME3-209ENST00000566600 F5H768 121 aa18.45■□□□□ 0.54
NME3-209ENST00000566600 SH2D1AO60880 128 aa18.45■□□□□ 0.54
NME3-209ENST00000566600 ORM1P02763 201 aa18.45■□□□□ 0.54
NME3-209ENST00000566600 CRIP1P50238 77 aa18.45■□□□□ 0.54
NME3-209ENST00000566600 NHLRC2Q8NBF2 726 aa18.45■□□□□ 0.54
NME3-209ENST00000566600 DERL1Q9BUN8 251 aa18.45■□□□□ 0.54
NME3-209ENST00000566600 APLNQ9ULZ1 77 aa18.45■□□□□ 0.54
NME3-209ENST00000566600 MRPL16Q9NX20 251 aaKnown RBP18.44■□□□□ 0.54
NME3-209ENST00000566600 M0R2P5 195 aa18.43■□□□□ 0.54
NME3-209ENST00000566600 ZNF506Q5JVG8 444 aa18.43■□□□□ 0.54
NME3-209ENST00000566600 SMIM12Q96EX1 92 aa18.43■□□□□ 0.54
NME3-209ENST00000566600 IGKV3D-20A0A0C4DH25 116 aa18.42■□□□□ 0.54
NME3-209ENST00000566600 B4DEV8 164 aa18.42■□□□□ 0.54
NME3-209ENST00000566600 GNG4P50150 75 aa18.42■□□□□ 0.54
NME3-209ENST00000566600 CENPWQ5EE01 88 aa18.42■□□□□ 0.54
NME3-209ENST00000566600 RASL10AQ92737 203 aa18.42■□□□□ 0.54
NME3-209ENST00000566600 TMEM250H0YL14 139 aa18.41■□□□□ 0.54
NME3-209ENST00000566600 ASIPP42127 132 aa18.41■□□□□ 0.54
NME3-209ENST00000566600 TMEM88Q6PEY1 159 aa18.41■□□□□ 0.54
NME3-209ENST00000566600 KRBOX1C9JBD0 128 aa18.4■□□□□ 0.54
NME3-209ENST00000566600 S100A4P26447 101 aaKnown RBP18.4■□□□□ 0.54
NME3-209ENST00000566600 LINC00476Q8WZB0 136 aa18.4■□□□□ 0.54
NME3-209ENST00000566600 FAM210AQ96ND0 272 aa18.4■□□□□ 0.54
NME3-209ENST00000566600 EIF5A2Q9GZV4 153 aaKnown RBP18.4■□□□□ 0.54
NME3-209ENST00000566600 RAB19A4D1S5 217 aa18.39■□□□□ 0.53
NME3-209ENST00000566600 M0R036 132 aa18.39■□□□□ 0.53
NME3-209ENST00000566600 NDUFS6O75380 124 aaKnown RBP18.39■□□□□ 0.53
NME3-209ENST00000566600 OR5I1Q13606 314 aa18.39■□□□□ 0.53
NME3-209ENST00000566600 LINC01559Q495D7 138 aa18.39■□□□□ 0.53
NME3-209ENST00000566600 TOR2AQ5JU69 321 aa18.39■□□□□ 0.53
NME3-209ENST00000566600 C15orf53Q8NAA6 179 aa18.39■□□□□ 0.53
NME3-209ENST00000566600 C9orf85Q96MD7 179 aa18.39■□□□□ 0.53
NME3-209ENST00000566600 DNLZQ5SXM8 178 aa18.38■□□□□ 0.53
NME3-209ENST00000566600 LGALS9CQ6DKI2 356 aa18.37■□□□□ 0.53
NME3-209ENST00000566600 PRR27Q6MZM9 219 aa18.37■□□□□ 0.53
NME3-209ENST00000566600 PTH2Q96A98 100 aa18.37■□□□□ 0.53
NME3-209ENST00000566600 BIN3Q9NQY0 253 aa18.37■□□□□ 0.53
NME3-209ENST00000566600 RNASE3P12724 160 aaKnown RBP18.36■□□□□ 0.53
NME3-209ENST00000566600 HOXA5P20719 270 aa18.36■□□□□ 0.53
NME3-209ENST00000566600 PLECQ15149 4684 aaKnown RBP18.36■□□□□ 0.53
NME3-209ENST00000566600 IL36BQ9NZH7 164 aa18.36■□□□□ 0.53
NME3-209ENST00000566600 KMT2CQ8NEZ4 4911 aaKnown RBP18.35■□□□□ 0.53
NME3-209ENST00000566600 LY6G6CO95867 125 aa18.35■□□□□ 0.53
NME3-209ENST00000566600 IGLV2-8P01709 118 aa18.35■□□□□ 0.53
NME3-209ENST00000566600 MGST1P10620 155 aaKnown RBP18.35■□□□□ 0.53
NME3-209ENST00000566600 ZNF876PQ49A33 203 aa18.35■□□□□ 0.53
NME3-209ENST00000566600 C9JCJ5 164 aa18.34■□□□□ 0.53
NME3-209ENST00000566600 SLAQ13239 276 aa18.34■□□□□ 0.53
NME3-209ENST00000566600 PCNPQ8WW12 178 aaKnown RBP18.34■□□□□ 0.53
NME3-209ENST00000566600 LYSTQ99698 3801 aa18.34■□□□□ 0.53
NME3-209ENST00000566600 TRBV20OR9-2A0A075B6H5 130 aa18.33■□□□□ 0.52
NME3-209ENST00000566600 TMSB15BA0A087X1C1 80 aa18.33■□□□□ 0.52
NME3-209ENST00000566600 TRAV4A0A0B4J268 109 aa18.33■□□□□ 0.52
NME3-209ENST00000566600 H3BNG1 76 aa18.33■□□□□ 0.52
NME3-209ENST00000566600 DAZAP1Q96EP5 407 aaKnown RBP18.33■□□□□ 0.52
NME3-209ENST00000566600 PARLQ9H300 379 aa18.33■□□□□ 0.52
NME3-209ENST00000566600 TRAV26-1A0A087WT03 109 aa18.32■□□□□ 0.52
NME3-209ENST00000566600 GRIFINA4D1Z8 144 aa18.32■□□□□ 0.52
NME3-209ENST00000566600 IGHV3-53P01767 116 aa18.32■□□□□ 0.52
NME3-209ENST00000566600 CXCL1P09341 107 aa18.32■□□□□ 0.52
NME3-209ENST00000566600 P0DMU3 169 aa18.32■□□□□ 0.52
NME3-209ENST00000566600 FAM231AP0DMU4 169 aa18.32■□□□□ 0.52
NME3-209ENST00000566600 FAM231CP0DMU5 169 aa18.32■□□□□ 0.52
NME3-209ENST00000566600 PIK3CD-AS1Q5SR53 167 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms