RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 SRD5A3Q9H8P0 318 aa13.76□□□□□ -0.21
COMMD4-213ENST00000565834 FAM231BA6NCW3 169 aa13.75□□□□□ -0.21
COMMD4-213ENST00000565834 MUC21Q5SSG8 566 aa13.75□□□□□ -0.21
COMMD4-213ENST00000565834 NAT8BQ9UHF3 227 aa13.75□□□□□ -0.21
COMMD4-213ENST00000565834 HIGD1CA8MV81 97 aa13.75□□□□□ -0.21
COMMD4-213ENST00000565834 INSP01308 110 aa13.75□□□□□ -0.21
COMMD4-213ENST00000565834 GTSF1Q8WW33 167 aa13.75□□□□□ -0.21
COMMD4-213ENST00000565834 XCL2Q9UBD3 114 aa13.75□□□□□ -0.21
COMMD4-213ENST00000565834 TRAV9-1A0A075B6T8 112 aa13.74□□□□□ -0.21
COMMD4-213ENST00000565834 TGIF2-C20orf24A0A0A6YYL0 155 aa13.74□□□□□ -0.21
COMMD4-213ENST00000565834 G3V4G9 280 aa13.74□□□□□ -0.21
COMMD4-213ENST00000565834 KRTAP10-11P60412 298 aa13.74□□□□□ -0.21
COMMD4-213ENST00000565834 ANXA2RQ3ZCQ2 193 aa13.74□□□□□ -0.21
COMMD4-213ENST00000565834 MORN3Q6PF18 240 aaPredicted RBP13.74□□□□□ -0.21
COMMD4-213ENST00000565834 TRBV24-1A0A075B6N3 115 aa13.73□□□□□ -0.21
COMMD4-213ENST00000565834 GRIFINA4D1Z8 144 aa13.73□□□□□ -0.21
COMMD4-213ENST00000565834 COLCA2A8K830 154 aa13.73□□□□□ -0.21
COMMD4-213ENST00000565834 FAM159AQ6UWV7 190 aa13.73□□□□□ -0.21
COMMD4-213ENST00000565834 NUP35Q8NFH5 326 aa13.73□□□□□ -0.21
COMMD4-213ENST00000565834 CXCL1P09341 107 aa13.72□□□□□ -0.21
COMMD4-213ENST00000565834 RBMY1A1P0DJD3 496 aaKnown RBP13.72□□□□□ -0.21
COMMD4-213ENST00000565834 RBMY1CP0DJD4 496 aa13.72□□□□□ -0.21
COMMD4-213ENST00000565834 RBMY1FQ15415 496 aaKnown RBP13.72□□□□□ -0.21
COMMD4-213ENST00000565834 SAMD5Q5TGI4 173 aa13.72□□□□□ -0.21
COMMD4-213ENST00000565834 BTF3L4Q96K17 158 aa13.72□□□□□ -0.21
COMMD4-213ENST00000565834 KCNS1Q96KK3 526 aa13.72□□□□□ -0.21
COMMD4-213ENST00000565834 C20orf144Q9BQM9 153 aa13.72□□□□□ -0.21
COMMD4-213ENST00000565834 ZNF575Q86XF7 245 aa13.72□□□□□ -0.21
COMMD4-213ENST00000565834 PGLYRP4Q96LB8 373 aa13.72□□□□□ -0.21
COMMD4-213ENST00000565834 PYGO2Q9BRQ0 406 aa13.72□□□□□ -0.21
COMMD4-213ENST00000565834 IGHV1OR15-1A0A075B7D0 117 aa13.71□□□□□ -0.21
COMMD4-213ENST00000565834 FOXA3P55318 350 aaPredicted RBP13.71□□□□□ -0.21
COMMD4-213ENST00000565834 TDRG1Q3Y452 100 aa13.71□□□□□ -0.21
COMMD4-213ENST00000565834 FER1L6-AS1Q8NA97 138 aa13.71□□□□□ -0.21
COMMD4-213ENST00000565834 FAM210BQ96KR6 192 aa13.71□□□□□ -0.21
COMMD4-213ENST00000565834 TPPP3Q9BW30 176 aa13.71□□□□□ -0.21
COMMD4-213ENST00000565834 C1QTNF4Q9BXJ3 329 aa13.71□□□□□ -0.21
COMMD4-213ENST00000565834 SPINK4O60575 86 aa13.7□□□□□ -0.22
COMMD4-213ENST00000565834 IGLC6P0CF74 106 aa13.7□□□□□ -0.22
COMMD4-213ENST00000565834 RAB5BP61020 215 aa13.7□□□□□ -0.22
COMMD4-213ENST00000565834 GIG44P09565 113 aaPredicted RBP13.69□□□□□ -0.22
COMMD4-213ENST00000565834 ASIPP42127 132 aa13.69□□□□□ -0.22
COMMD4-213ENST00000565834 LOC102724200A0A096LPH7 203 aaPredicted RBP13.69□□□□□ -0.22
COMMD4-213ENST00000565834 GNRH2O43555 120 aa13.69□□□□□ -0.22
COMMD4-213ENST00000565834 TYMSP04818 313 aa13.69□□□□□ -0.22
COMMD4-213ENST00000565834 LYZL1Q6UWQ5 148 aa13.69□□□□□ -0.22
COMMD4-213ENST00000565834 CSTL1Q9H114 145 aa13.69□□□□□ -0.22
COMMD4-213ENST00000565834 RAB5AP20339 215 aa13.68□□□□□ -0.22
COMMD4-213ENST00000565834 S100A4P26447 101 aaKnown RBP13.68□□□□□ -0.22
COMMD4-213ENST00000565834 CTRLP40313 264 aa13.68□□□□□ -0.22
COMMD4-213ENST00000565834 MRPL54Q6P161 138 aaKnown RBP13.68□□□□□ -0.22
COMMD4-213ENST00000565834 TMEM256Q8N2U0 113 aa13.68□□□□□ -0.22
COMMD4-213ENST00000565834 BORCS7Q96B45 105 aa13.68□□□□□ -0.22
COMMD4-213ENST00000565834 LINC01587Q99440 93 aa13.68□□□□□ -0.22
COMMD4-213ENST00000565834 TMEM208Q9BTX3 173 aa13.68□□□□□ -0.22
COMMD4-213ENST00000565834 C1orf196B1AJZ1 125 aa13.67□□□□□ -0.22
COMMD4-213ENST00000565834 H3BVH4 76 aa13.67□□□□□ -0.22
COMMD4-213ENST00000565834 IGHV4-30-4P0DP06 118 aa13.67□□□□□ -0.22
COMMD4-213ENST00000565834 DNLZQ5SXM8 178 aa13.67□□□□□ -0.22
COMMD4-213ENST00000565834 A0A1B0GUT8 65 aa13.66□□□□□ -0.22
COMMD4-213ENST00000565834 CBY3A6NI87 242 aa13.66□□□□□ -0.22
COMMD4-213ENST00000565834 F2Z2F3 143 aa13.66□□□□□ -0.22
COMMD4-213ENST00000565834 ATP5L2Q7Z4Y8 100 aa13.66□□□□□ -0.22
COMMD4-213ENST00000565834 C1orf158Q8N1D5 194 aa13.66□□□□□ -0.22
COMMD4-213ENST00000565834 TP53TG3Q9ULZ0 132 aa13.66□□□□□ -0.22
COMMD4-213ENST00000565834 GOLT1BQ9Y3E0 138 aa13.66□□□□□ -0.22
COMMD4-213ENST00000565834 NOTCH1P46531 2555 aa13.66□□□□□ -0.22
COMMD4-213ENST00000565834 MGAM2Q2M2H8 2515 aa13.66□□□□□ -0.22
COMMD4-213ENST00000565834 TRGV11A0A075B6L2 103 aa13.66□□□□□ -0.22
COMMD4-213ENST00000565834 ARMS2P0C7Q2 107 aa13.66□□□□□ -0.22
COMMD4-213ENST00000565834 HTN1P15515 57 aa13.66□□□□□ -0.22
COMMD4-213ENST00000565834 LINC00467Q9BRT7 94 aa13.66□□□□□ -0.22
COMMD4-213ENST00000565834 TIMM8BQ9Y5J9 83 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-213ENST00000565834 IGHV3OR16-12A0A075B7B8 117 aa13.65□□□□□ -0.22
COMMD4-213ENST00000565834 KIR2DL5BA0A0G2JN68 375 aa13.65□□□□□ -0.22
COMMD4-213ENST00000565834 KIR2DL5BA0A0G2JPC4 375 aa13.65□□□□□ -0.22
COMMD4-213ENST00000565834 SNAI2O43623 268 aa13.65□□□□□ -0.22
COMMD4-213ENST00000565834 OR5AL1P0C617 328 aa13.65□□□□□ -0.22
COMMD4-213ENST00000565834 MED14OSP0DP75 135 aa13.65□□□□□ -0.22
COMMD4-213ENST00000565834 APOC4P55056 127 aa13.65□□□□□ -0.22
COMMD4-213ENST00000565834 KIR2DL5AQ8N109 375 aa13.65□□□□□ -0.22
COMMD4-213ENST00000565834 KIR2DL5BQ8NHK3 375 aa13.65□□□□□ -0.22
COMMD4-213ENST00000565834 SSBP4Q9BWG4 385 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-213ENST00000565834 IGHV3-16A0A0C4DH30 117 aa13.64□□□□□ -0.23
COMMD4-213ENST00000565834 MUC21A0A0G2JKD1 596 aa13.64□□□□□ -0.23
COMMD4-213ENST00000565834 MUC21A0A140T8X8 626 aa13.64□□□□□ -0.23
COMMD4-213ENST00000565834 RNASE3P12724 160 aaKnown RBP13.64□□□□□ -0.23
COMMD4-213ENST00000565834 RPS10P46783 165 aaKnown RBP13.64□□□□□ -0.23
COMMD4-213ENST00000565834 RIGQ13278 110 aa13.64□□□□□ -0.23
COMMD4-213ENST00000565834 CSNK1G2-AS1Q8NCQ2 148 aa13.64□□□□□ -0.23
COMMD4-213ENST00000565834 DNAH3Q8TD57 4116 aa13.64□□□□□ -0.23
COMMD4-213ENST00000565834 NBEAL1Q6ZS30 2694 aa13.63□□□□□ -0.23
COMMD4-213ENST00000565834 A0A1B0GXF2 115 aa13.63□□□□□ -0.23
COMMD4-213ENST00000565834 FRMD6-AS1P0C7T7 363 aa13.63□□□□□ -0.23
COMMD4-213ENST00000565834 HBBP68871 147 aa13.63□□□□□ -0.23
COMMD4-213ENST00000565834 RASL11AQ6T310 242 aa13.63□□□□□ -0.23
COMMD4-213ENST00000565834 CAMPP49913 170 aa13.63□□□□□ -0.23
COMMD4-213ENST00000565834 SSTP61278 116 aa13.63□□□□□ -0.23
COMMD4-213ENST00000565834 OR10AG1Q8NH19 301 aa13.63□□□□□ -0.23
COMMD4-213ENST00000565834 CNFNQ9BYD5 112 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms