RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-217	ENST00000565832	RBAKDN	A6NC62	111 aa		4.64	□□□□□ -1.67
CHD9-217	ENST00000565832	FABP5P3	A8MUU1	101 aa		4.64	□□□□□ -1.67
CHD9-217	ENST00000565832		B5MCH6	92 aa		4.64	□□□□□ -1.67
CHD9-217	ENST00000565832		K7EQG2	157 aa		4.64	□□□□□ -1.67
CHD9-217	ENST00000565832	RNASE4	P34096	147 aa	Known RBP	4.64	□□□□□ -1.67
CHD9-217	ENST00000565832	MEOX2	P50222	304 aa		4.64	□□□□□ -1.67
CHD9-217	ENST00000565832	CD300E	Q496F6	205 aa	Predicted RBP	4.64	□□□□□ -1.67
CHD9-217	ENST00000565832	LYZL1	Q6UWQ5	148 aa		4.64	□□□□□ -1.67
CHD9-217	ENST00000565832	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.64	□□□□□ -1.67
CHD9-217	ENST00000565832	COX8C	Q7Z4L0	72 aa		4.64	□□□□□ -1.67
CHD9-217	ENST00000565832	ZFAND2A	Q8N6M9	145 aa		4.64	□□□□□ -1.67
CHD9-217	ENST00000565832	ARL6IP6	Q8N6S5	226 aa		4.64	□□□□□ -1.67
CHD9-217	ENST00000565832	OR10J6P	Q8NGY7	276 aa		4.64	□□□□□ -1.67
CHD9-217	ENST00000565832	GNB1L	Q9BYB4	327 aa		4.64	□□□□□ -1.67
CHD9-217	ENST00000565832	TRAV12-2	A0A075B6T6	113 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832		A0A1B0GXF2	115 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	UBE2C	O00762	179 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	TCF21	O43680	179 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	HOXA5	P20719	270 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	SCGB2A2	Q13296	93 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	OR4B1	Q8NGF8	309 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	SPATA3	Q8NHX4	192 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	MRPL53	Q96EL3	112 aa	Known RBP	4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	TP53TG3	Q9ULZ0	132 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	TSSC4	Q9Y5U2	329 aa	Predicted RBP	4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	ANK2	Q01484	3957 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	MUC4	Q99102	2169 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	TRAV9-1	A0A075B6T8	112 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	KNCN	A6PVL3	124 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832		M0R2Z0	102 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	OVOL1	O14753	267 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	CRLF1	O75462	422 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	APCS	P02743	223 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	PRM2	P04554	102 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	GPX1	P07203	203 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	FXYD7	P58549	80 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	DEFB114	Q30KQ6	69 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	APRG1	Q8IVJ8	170 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	LINC00477	Q96M19	166 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	NDFIP1	Q9BT67	221 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	NAGK	Q9UJ70	344 aa		4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.63	□□□□□ -1.67
CHD9-217	ENST00000565832	GNRH2	O43555	120 aa		4.62	□□□□□ -1.67
CHD9-217	ENST00000565832	FABP4	P15090	132 aa		4.62	□□□□□ -1.67
CHD9-217	ENST00000565832	NTF3	P20783	257 aa		4.62	□□□□□ -1.67
CHD9-217	ENST00000565832	SRI	P30626	198 aa		4.62	□□□□□ -1.67
CHD9-217	ENST00000565832	BMI1	P35226	326 aa		4.62	□□□□□ -1.67
CHD9-217	ENST00000565832	ID1	P41134	155 aa		4.62	□□□□□ -1.67
CHD9-217	ENST00000565832	FHL3	Q13643	280 aa		4.62	□□□□□ -1.67
CHD9-217	ENST00000565832	HIST3H2BB	Q8N257	126 aa		4.62	□□□□□ -1.67
CHD9-217	ENST00000565832	SYT8	Q8NBV8	401 aa		4.62	□□□□□ -1.67
CHD9-217	ENST00000565832	FAM19A4	Q96LR4	140 aa		4.62	□□□□□ -1.67
CHD9-217	ENST00000565832	GFRA4	Q9GZZ7	299 aa		4.62	□□□□□ -1.67
CHD9-217	ENST00000565832		A0A1B0GUT8	65 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832		M0QZ24	198 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	NDUFA7	O95182	113 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	CRISP2	P16562	243 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	DEFB131A	P59861	70 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	SNRPD3	P62318	126 aa	Known RBP	4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	HBB	P68871	147 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	IQCJ	Q1A5X6	159 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	SPINK13	Q1W4C9	94 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	RCHY1	Q96PM5	261 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	PEMT	Q9UBM1	199 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	TRAV12-3	A0A0B4J271	114 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832		A0A0J9YX75	114 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	FAM231B	A6NCW3	169 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	FBLL1	A6NHQ2	334 aa	Known RBP	4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	GAS8-AS1	O95177	125 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	PAFAH1B2	P68402	229 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	TWIST1	Q15672	202 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	WDR73	Q6P4I2	378 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	FER1L6-AS1	Q8NA97	138 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	DYNLRB2	Q8TF09	96 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	HIST1H2BL	Q99880	126 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	PPP1R14D	Q9NXH3	145 aa		4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.61	□□□□□ -1.67
CHD9-217	ENST00000565832	NOTCH1	P46531	2555 aa		4.6	□□□□□ -1.67
CHD9-217	ENST00000565832	SERF1A	O75920	110 aa		4.6	□□□□□ -1.67
CHD9-217	ENST00000565832	HLA-DQA1	P01909	254 aa		4.6	□□□□□ -1.67
CHD9-217	ENST00000565832	IGLC6	P0CF74	106 aa		4.6	□□□□□ -1.67
CHD9-217	ENST00000565832	ANXA2R	Q3ZCQ2	193 aa		4.6	□□□□□ -1.67
CHD9-217	ENST00000565832	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.6	□□□□□ -1.67
CHD9-217	ENST00000565832	OR10D4P	Q8NGN7	298 aa		4.6	□□□□□ -1.67
CHD9-217	ENST00000565832	OR10AG1	Q8NH19	301 aa		4.6	□□□□□ -1.67
CHD9-217	ENST00000565832	FAM30A	Q9NZY2	134 aa		4.6	□□□□□ -1.67
CHD9-217	ENST00000565832	NACA	E9PAV3	2078 aa		4.6	□□□□□ -1.67
CHD9-217	ENST00000565832		H3BVH4	76 aa		4.6	□□□□□ -1.67
CHD9-217	ENST00000565832	SAP30	O75446	220 aa		4.6	□□□□□ -1.67
CHD9-217	ENST00000565832	AMBP	P02760	352 aa		4.6	□□□□□ -1.67
CHD9-217	ENST00000565832	HTN1	P15515	57 aa		4.6	□□□□□ -1.67
CHD9-217	ENST00000565832	EBLN2	Q6P2I7	272 aa		4.6	□□□□□ -1.67
CHD9-217	ENST00000565832	ATP5L2	Q7Z4Y8	100 aa		4.6	□□□□□ -1.67
CHD9-217	ENST00000565832	BAGE3	Q86Y29	109 aa		4.6	□□□□□ -1.67
CHD9-217	ENST00000565832	AMN1	Q8IY45	258 aa		4.6	□□□□□ -1.67
CHD9-217	ENST00000565832	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.6	□□□□□ -1.67
CHD9-217	ENST00000565832		A0A087WWL8	130 aa		4.59	□□□□□ -1.67
CHD9-217	ENST00000565832	RBMY1B	A6NDE4	496 aa	Known RBP	4.59	□□□□□ -1.67
CHD9-217	ENST00000565832	RBMY1E	A6NEQ0	496 aa	Known RBP	4.59	□□□□□ -1.67
CHD9-217	ENST00000565832	KLLN	B2CW77	178 aa		4.59	□□□□□ -1.67

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