RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 C11orf1Q9H5F2 150 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 FKBP11Q9NYL4 201 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 PCNX2A6NKB5 2137 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 TECTAO75443 2155 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 MAST4O15021 2626 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 TRGV10A0A0A0MS01 117 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 MDFIC2A0A1B0GVS7 189 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 TCF21O43680 179 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 ZNF737O75373 536 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 MT-ND6P03923 174 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 TYMSP04818 313 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 FBP1P09467 338 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 CGB3P0DN86 165 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 CGB7P0DN87 165 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 PPP1CCP36873 323 aaKnown RBP2.28□□□□□ -2.04
LINC00560-201ENST00000564593 IDH3GP51553 393 aaPredicted RBP2.28□□□□□ -2.04
LINC00560-201ENST00000564593 TAS2R45P59539 299 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 SPCS3P61009 180 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 RAB4BP61018 213 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 RHOBP62745 196 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 DEFA6Q01524 100 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 AESQ08117 197 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 TMEM267Q0VDI3 215 aaPredicted RBP2.28□□□□□ -2.04
LINC00560-201ENST00000564593 ADIRFQ15847 76 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 HLA-DRB5Q30154 266 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 KRTAP25-1Q3LHN0 102 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 SPANXN5Q5MJ07 72 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 HES3Q5TGS1 186 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 OR2T2Q6IF00 324 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 TMEM14EPQ6UXP3 125 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 S100A7AQ86SG5 101 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 FAM24BQ8N5W8 94 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 CNEP1R1Q8N9A8 125 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 VSTM2AQ8TAG5 236 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 GPR146Q96CH1 333 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 IGF2BP2-AS1Q96M15 143 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 HES4Q9HCC6 221 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 NIT2Q9NQR4 276 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 DOK5Q9P104 306 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 PRNDQ9UKY0 176 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 SPTBN5Q9NRC6 3674 aaKnown RBP2.28□□□□□ -2.04
LINC00560-201ENST00000564593 REV3LO60673 3130 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 PTPRBP23467 1997 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 URB1O60287 2271 aaKnown RBP2.28□□□□□ -2.04
LINC00560-201ENST00000564593 ZNF462Q96JM2 2506 aa2.28□□□□□ -2.04
LINC00560-201ENST00000564593 TRAV8-2A0A0B4J237 113 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 A0A1B0GV50 99 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 ARGFXA6NJG6 315 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 YPEL1O60688 119 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 HBZP02008 142 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 APOA2P02652 100 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 IAPPP10997 89 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 S100A7P31151 101 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 GNG10P50151 68 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 PKIAP61925 76 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 RUNX1Q01196 453 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 ELOBQ15370 118 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 IQCJQ1A5X6 159 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 LCN15Q6UWW0 184 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 SLC25A40Q8TBP6 338 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 YPEL2Q96QA6 119 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 TMEM208Q9BTX3 173 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 NPCDR1Q9BY65 106 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 MS4A6AQ9H2W1 248 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 FBXL15Q9H469 300 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 TMEM167BQ9NRX6 74 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 RPRMQ9NS64 109 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 LY96Q9Y6Y9 160 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 RANBP2P49792 3224 aaKnown RBP2.27□□□□□ -2.05
LINC00560-201ENST00000564593 PLCE1Q9P212 2302 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 hADV38S2A0JD32 116 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 ODAMA1E959 279 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 GGTLC3B5MD39 225 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 C9JCJ5 164 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 TMEM238C9JI98 176 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 H3BMM0 161 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 IGKV1-5P01602 117 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 HIST1H1EP10412 219 aaKnown RBP2.27□□□□□ -2.05
LINC00560-201ENST00000564593 AKR1C3P42330 323 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 NDUFA6P56556 154 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 SRSF6Q13247 344 aaKnown RBP2.27□□□□□ -2.05
LINC00560-201ENST00000564593 CLEC12BQ2HXU8 276 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 FAM162BQ5T6X4 162 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 DEFB123Q8N688 67 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 OR2T10Q8NGZ9 312 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 OR4A5Q8NH83 315 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 Q8WTZ3 238 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 UBE2WQ96B02 151 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 OR4C12Q96R67 309 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 MRPL32Q9BYC8 188 aaKnown RBP2.27□□□□□ -2.05
LINC00560-201ENST00000564593 MAP1LC3AQ9H492 121 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 NPVFQ9HCQ7 196 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 UNC80Q8N2C7 3258 aa2.27□□□□□ -2.05
LINC00560-201ENST00000564593 RP1L1Q8IWN7 2480 aaPredicted RBP2.26□□□□□ -2.05
LINC00560-201ENST00000564593 YLPM1P49750 1951 aaKnown RBP2.26□□□□□ -2.05
LINC00560-201ENST00000564593 BDP1A6H8Y1 2624 aa2.26□□□□□ -2.05
LINC00560-201ENST00000564593 CACNA1HO95180 2353 aa2.26□□□□□ -2.05
LINC00560-201ENST00000564593 TRAV38-1A0A0B4J264 116 aa2.26□□□□□ -2.05
LINC00560-201ENST00000564593 A6NED7 52 aa2.26□□□□□ -2.05
LINC00560-201ENST00000564593 CORTO00230 105 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms