RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 HSBP1O75506 76 aa7.13□□□□□ -1.27
LINC00838-201ENST00000562956 APCSP02743 223 aa7.13□□□□□ -1.27
LINC00838-201ENST00000562956 FOXA3P55318 350 aaPredicted RBP7.13□□□□□ -1.27
LINC00838-201ENST00000562956 MUC21Q5SSG8 566 aa7.13□□□□□ -1.27
LINC00838-201ENST00000562956 Q6ZSV7 163 aa7.13□□□□□ -1.27
LINC00838-201ENST00000562956 NAA38Q9BRA0 125 aaKnown RBP7.13□□□□□ -1.27
LINC00838-201ENST00000562956 UFC1Q9Y3C8 167 aa7.13□□□□□ -1.27
LINC00838-201ENST00000562956 ACANP16112 2415 aa7.12□□□□□ -1.27
LINC00838-201ENST00000562956 TMSB15BA0A087X1C1 80 aa7.12□□□□□ -1.27
LINC00838-201ENST00000562956 hDV102S1A0JD36 115 aa7.12□□□□□ -1.27
LINC00838-201ENST00000562956 M0R2Z0 102 aa7.12□□□□□ -1.27
LINC00838-201ENST00000562956 SYNJ2BPP57105 145 aa7.12□□□□□ -1.27
LINC00838-201ENST00000562956 DEFB1P60022 68 aa7.12□□□□□ -1.27
LINC00838-201ENST00000562956 HBBP68871 147 aa7.12□□□□□ -1.27
LINC00838-201ENST00000562956 TCTEX1D4Q5JR98 221 aa7.12□□□□□ -1.27
LINC00838-201ENST00000562956 HIST2H2BDQ6DRA6 164 aa7.12□□□□□ -1.27
LINC00838-201ENST00000562956 SPATA12Q7Z6I5 190 aa7.12□□□□□ -1.27
LINC00838-201ENST00000562956 SMR3AQ99954 134 aa7.12□□□□□ -1.27
LINC00838-201ENST00000562956 NDFIP1Q9BT67 221 aa7.12□□□□□ -1.27
LINC00838-201ENST00000562956 PPBPP02775 128 aa7.12□□□□□ -1.27
LINC00838-201ENST00000562956 HOXD3P31249 432 aaPredicted RBP7.12□□□□□ -1.27
LINC00838-201ENST00000562956 TCTAP57738 103 aa7.12□□□□□ -1.27
LINC00838-201ENST00000562956 DEFB136Q30KP8 78 aa7.12□□□□□ -1.27
LINC00838-201ENST00000562956 EBLN2Q6P2I7 272 aa7.12□□□□□ -1.27
LINC00838-201ENST00000562956 TMEM189A5PLL7 270 aa7.11□□□□□ -1.27
LINC00838-201ENST00000562956 ZNF138P52744 262 aa7.11□□□□□ -1.27
LINC00838-201ENST00000562956 TMEM78Q5T7P6 136 aa7.11□□□□□ -1.27
LINC00838-201ENST00000562956 C9orf47Q6ZRZ4 202 aa7.11□□□□□ -1.27
LINC00838-201ENST00000562956 ZNF575Q86XF7 245 aa7.11□□□□□ -1.27
LINC00838-201ENST00000562956 PMCHL2Q9BQD1 86 aa7.11□□□□□ -1.27
LINC00838-201ENST00000562956 MRPS16Q9Y3D3 137 aaKnown RBP7.11□□□□□ -1.27
LINC00838-201ENST00000562956 TAX1BP3O14907 124 aa7.11□□□□□ -1.27
LINC00838-201ENST00000562956 ARMS2P0C7Q2 107 aa7.11□□□□□ -1.27
LINC00838-201ENST00000562956 TPPP3Q9BW30 176 aa7.11□□□□□ -1.27
LINC00838-201ENST00000562956 ANK3Q12955 4377 aaKnown RBP7.11□□□□□ -1.27
LINC00838-201ENST00000562956 TRAV9-2A0A087WT02 112 aa7.11□□□□□ -1.27
LINC00838-201ENST00000562956 GAGE12BA1L429 117 aa7.11□□□□□ -1.27
LINC00838-201ENST00000562956 BMI1P35226 326 aa7.11□□□□□ -1.27
LINC00838-201ENST00000562956 HAX1O00165 279 aa7.1□□□□□ -1.27
LINC00838-201ENST00000562956 A0A1B0GUT8 65 aa7.1□□□□□ -1.27
LINC00838-201ENST00000562956 FABP5P3A8MUU1 101 aa7.1□□□□□ -1.27
LINC00838-201ENST00000562956 F6UB75 175 aa7.1□□□□□ -1.27
LINC00838-201ENST00000562956 LGALS9O00182 355 aa7.1□□□□□ -1.27
LINC00838-201ENST00000562956 SLURP1P55000 103 aa7.1□□□□□ -1.27
LINC00838-201ENST00000562956 LINC00173Q6ZV60 143 aa7.1□□□□□ -1.27
LINC00838-201ENST00000562956 DCANP1Q8TF63 244 aa7.1□□□□□ -1.27
LINC00838-201ENST00000562956 TRAV8-6A0A0B4J262 113 aa7.09□□□□□ -1.27
LINC00838-201ENST00000562956 ORM1P02763 201 aa7.09□□□□□ -1.27
LINC00838-201ENST00000562956 KLF5Q13887 457 aaPredicted RBP7.09□□□□□ -1.27
LINC00838-201ENST00000562956 LYZL1Q6UWQ5 148 aa7.09□□□□□ -1.27
LINC00838-201ENST00000562956 Q6ZQT7 251 aa7.09□□□□□ -1.27
LINC00838-201ENST00000562956 WFDC3Q8IUB2 231 aa7.09□□□□□ -1.27
LINC00838-201ENST00000562956 C18orf32Q8TCD1 76 aa7.09□□□□□ -1.27
LINC00838-201ENST00000562956 DUX3Q96PT4 197 aa7.09□□□□□ -1.27
LINC00838-201ENST00000562956 MYO9AB2RTY4 2548 aa7.09□□□□□ -1.27
LINC00838-201ENST00000562956 OR10J3Q5JRS4 329 aa7.09□□□□□ -1.27
LINC00838-201ENST00000562956 KHDC1LQ5JSQ8 128 aa7.09□□□□□ -1.27
LINC00838-201ENST00000562956 MS4A6AQ9H2W1 248 aa7.09□□□□□ -1.27
LINC00838-201ENST00000562956 C11orf21Q9P2W6 132 aa7.09□□□□□ -1.27
LINC00838-201ENST00000562956 NF1P21359 2839 aa7.09□□□□□ -1.28
LINC00838-201ENST00000562956 OTOGQ6ZRI0 2925 aa7.09□□□□□ -1.28
LINC00838-201ENST00000562956 OR4C46A6NHA9 309 aa7.08□□□□□ -1.28
LINC00838-201ENST00000562956 C2orf70A6NJV1 201 aa7.08□□□□□ -1.28
LINC00838-201ENST00000562956 K7ERU9 68 aa7.08□□□□□ -1.28
LINC00838-201ENST00000562956 OVOL1O14753 267 aa7.08□□□□□ -1.28
LINC00838-201ENST00000562956 PRR9Q5T870 116 aa7.08□□□□□ -1.28
LINC00838-201ENST00000562956 Q6AWC8 147 aa7.08□□□□□ -1.28
LINC00838-201ENST00000562956 OR11H1Q8NG94 326 aa7.08□□□□□ -1.28
LINC00838-201ENST00000562956 OR10J6PQ8NGY7 276 aa7.08□□□□□ -1.28
LINC00838-201ENST00000562956 C4orf3Q8WVX3 66 aa7.08□□□□□ -1.28
LINC00838-201ENST00000562956 HIST1H1AQ02539 215 aaPredicted RBP7.08□□□□□ -1.28
LINC00838-201ENST00000562956 ADAMTSL5Q6ZMM2 481 aa7.08□□□□□ -1.28
LINC00838-201ENST00000562956 LINC00477Q96M19 166 aa7.08□□□□□ -1.28
LINC00838-201ENST00000562956 IGKV3D-20A0A0C4DH25 116 aa7.07□□□□□ -1.28
LINC00838-201ENST00000562956 SRSF2Q01130 221 aaKnown RBP7.07□□□□□ -1.28
LINC00838-201ENST00000562956 RIGQ13278 110 aa7.07□□□□□ -1.28
LINC00838-201ENST00000562956 LINC01559Q495D7 138 aa7.07□□□□□ -1.28
LINC00838-201ENST00000562956 OR8A1Q8NGG7 326 aa7.07□□□□□ -1.28
LINC00838-201ENST00000562956 PRSS47A8MTI9 375 aa7.07□□□□□ -1.28
LINC00838-201ENST00000562956 LINC01619G3V211 115 aa7.07□□□□□ -1.28
LINC00838-201ENST00000562956 J3KRW8 73 aa7.07□□□□□ -1.28
LINC00838-201ENST00000562956 RNASE1P07998 156 aaKnown RBP7.07□□□□□ -1.28
LINC00838-201ENST00000562956 RPS20P60866 119 aaKnown RBP7.07□□□□□ -1.28
LINC00838-201ENST00000562956 BVES-AS1Q5T3Y7 98 aa7.07□□□□□ -1.28
LINC00838-201ENST00000562956 C11orf44Q8N8P7 122 aa7.07□□□□□ -1.28
LINC00838-201ENST00000562956 KLHL30-AS1Q8NEE0 82 aa7.07□□□□□ -1.28
LINC00838-201ENST00000562956 LY6G6DO95868 133 aa7.07□□□□□ -1.28
LINC00838-201ENST00000562956 IGLC6P0CF74 106 aa7.07□□□□□ -1.28
LINC00838-201ENST00000562956 ID1P41134 155 aa7.07□□□□□ -1.28
LINC00838-201ENST00000562956 ZFAND2AQ8N6M9 145 aa7.07□□□□□ -1.28
LINC00838-201ENST00000562956 FER1L6-AS1Q8NA97 138 aa7.07□□□□□ -1.28
LINC00838-201ENST00000562956 OR1N2Q8NGR9 330 aa7.07□□□□□ -1.28
LINC00838-201ENST00000562956 TMEM160Q9NX00 188 aa7.07□□□□□ -1.28
LINC00838-201ENST00000562956 LENEPQ9Y5L5 61 aa7.07□□□□□ -1.28
LINC00838-201ENST00000562956 FAM19A4Q96LR4 140 aa7.06□□□□□ -1.28
LINC00838-201ENST00000562956 CLUHP3Q96NS8 147 aa7.06□□□□□ -1.28
LINC00838-201ENST00000562956 NOTCH2Q04721 2471 aa7.06□□□□□ -1.28
LINC00838-201ENST00000562956 ZNF688P0C7X2 276 aa7.06□□□□□ -1.28
LINC00838-201ENST00000562956 KIR3DS1Q14943 382 aa7.06□□□□□ -1.28
LINC00838-201ENST00000562956 MTORP42345 2549 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms