RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 LYPD5Q6UWN5 251 aa9.24□□□□□ -0.93
USB1-205ENST00000561743 C5orf17Q8NAS9 161 aa9.24□□□□□ -0.93
USB1-205ENST00000561743 ASB13Q8WXK3 278 aa9.24□□□□□ -0.93
USB1-205ENST00000561743 TRAV4A0A0B4J268 109 aa9.23□□□□□ -0.93
USB1-205ENST00000561743 SERTM2A0A1B0GWG4 89 aa9.23□□□□□ -0.93
USB1-205ENST00000561743 GGTLC3B5MD39 225 aa9.23□□□□□ -0.93
USB1-205ENST00000561743 K7EQD1 137 aa9.23□□□□□ -0.93
USB1-205ENST00000561743 M0R2P5 195 aa9.23□□□□□ -0.93
USB1-205ENST00000561743 MBP02144 154 aa9.23□□□□□ -0.93
USB1-205ENST00000561743 Q6ZRN7 208 aaPredicted RBP9.23□□□□□ -0.93
USB1-205ENST00000561743 NEGR1Q7Z3B1 354 aa9.23□□□□□ -0.93
USB1-205ENST00000561743 SPATA12Q7Z6I5 190 aa9.23□□□□□ -0.93
USB1-205ENST00000561743 SDF2L1Q9HCN8 221 aa9.23□□□□□ -0.93
USB1-205ENST00000561743 TNFSF18Q9UNG2 199 aa9.23□□□□□ -0.93
USB1-205ENST00000561743 LRP1BQ9NZR2 4599 aa9.23□□□□□ -0.93
USB1-205ENST00000561743 CXorf1O96002 111 aa9.22□□□□□ -0.93
USB1-205ENST00000561743 IGLV2-11P01706 119 aa9.22□□□□□ -0.93
USB1-205ENST00000561743 GYPEP15421 78 aa9.22□□□□□ -0.93
USB1-205ENST00000561743 ZNF80P51504 273 aaPredicted RBP9.22□□□□□ -0.93
USB1-205ENST00000561743 RPL7L1Q6DKI1 246 aaKnown RBP9.22□□□□□ -0.93
USB1-205ENST00000561743 KCNS1Q96KK3 526 aa9.22□□□□□ -0.93
USB1-205ENST00000561743 NDFIP1Q9BT67 221 aa9.22□□□□□ -0.93
USB1-205ENST00000561743 FXYD6-FXYD2A0A087WZ82 144 aa9.21□□□□□ -0.94
USB1-205ENST00000561743 CDK2AP2O75956 126 aa9.21□□□□□ -0.94
USB1-205ENST00000561743 ORM1P02763 201 aa9.21□□□□□ -0.94
USB1-205ENST00000561743 SRIP30626 198 aa9.21□□□□□ -0.94
USB1-205ENST00000561743 KRTAP10-2P60368 255 aa9.21□□□□□ -0.94
USB1-205ENST00000561743 SUMO1P63165 101 aaKnown RBP9.21□□□□□ -0.94
USB1-205ENST00000561743 INO80EQ8NBZ0 244 aaPredicted RBP9.21□□□□□ -0.94
USB1-205ENST00000561743 OR4C5Q8NGB2 326 aa9.21□□□□□ -0.94
USB1-205ENST00000561743 ACTR3CQ9C0K3 210 aaPredicted RBP9.21□□□□□ -0.94
USB1-205ENST00000561743 TMEM167BQ9NRX6 74 aa9.21□□□□□ -0.94
USB1-205ENST00000561743 C11orf21Q9P2W6 132 aa9.21□□□□□ -0.94
USB1-205ENST00000561743 PSG8Q9UQ74 426 aa9.21□□□□□ -0.94
USB1-205ENST00000561743 HSPG2P98160 4391 aa9.2□□□□□ -0.94
USB1-205ENST00000561743 K7EQM0 130 aa9.2□□□□□ -0.94
USB1-205ENST00000561743 GCGP01275 180 aa9.2□□□□□ -0.94
USB1-205ENST00000561743 PFN1P07737 140 aaKnown RBP9.2□□□□□ -0.94
USB1-205ENST00000561743 ZNF726P1Q15940 193 aa9.2□□□□□ -0.94
USB1-205ENST00000561743 CYB561D1Q8N8Q1 229 aa9.2□□□□□ -0.94
USB1-205ENST00000561743 OR2T35Q8NGX2 323 aa9.2□□□□□ -0.94
USB1-205ENST00000561743 PCNPQ8WW12 178 aaKnown RBP9.2□□□□□ -0.94
USB1-205ENST00000561743 KRTAP4-5Q9BYR2 181 aa9.2□□□□□ -0.94
USB1-205ENST00000561743 EPDR1Q9UM22 224 aa9.2□□□□□ -0.94
USB1-205ENST00000561743 BORCS7-ASMTA0A0B4J1R7 106 aa9.19□□□□□ -0.94
USB1-205ENST00000561743 LOC100131303A0A0U1RQF7 123 aa9.19□□□□□ -0.94
USB1-205ENST00000561743 C9JCJ5 164 aa9.19□□□□□ -0.94
USB1-205ENST00000561743 G3V3Q6 166 aa9.19□□□□□ -0.94
USB1-205ENST00000561743 FLI1Q01543 452 aaPredicted RBP9.19□□□□□ -0.94
USB1-205ENST00000561743 WFDC10BQ8IUB3 73 aa9.19□□□□□ -0.94
USB1-205ENST00000561743 TMEM75Q8N9X5 138 aa9.19□□□□□ -0.94
USB1-205ENST00000561743 TNFRSF18Q9Y5U5 241 aa9.19□□□□□ -0.94
USB1-205ENST00000561743 DNAH5Q8TE73 4624 aa9.19□□□□□ -0.94
USB1-205ENST00000561743 A0A1W2PRE2 83 aa9.18□□□□□ -0.94
USB1-205ENST00000561743 TAAR5O14804 337 aa9.18□□□□□ -0.94
USB1-205ENST00000561743 GATA1P15976 413 aaPredicted RBP9.18□□□□□ -0.94
USB1-205ENST00000561743 ZFP69Q49AA0 526 aa9.18□□□□□ -0.94
USB1-205ENST00000561743 SMUG1Q53HV7 270 aa9.18□□□□□ -0.94
USB1-205ENST00000561743 PRNTQ86SH4 94 aa9.18□□□□□ -0.94
USB1-205ENST00000561743 C9orf85Q96MD7 179 aa9.18□□□□□ -0.94
USB1-205ENST00000561743 TXNDC17Q9BRA2 123 aa9.18□□□□□ -0.94
USB1-205ENST00000561743 LY96Q9Y6Y9 160 aa9.18□□□□□ -0.94
USB1-205ENST00000561743 CTXND1A0A1B0GTU2 59 aa9.17□□□□□ -0.94
USB1-205ENST00000561743 FBLL1A6NHQ2 334 aaKnown RBP9.17□□□□□ -0.94
USB1-205ENST00000561743 ZNF876PQ49A33 203 aa9.17□□□□□ -0.94
USB1-205ENST00000561743 DPPA3Q6W0C5 159 aa9.17□□□□□ -0.94
USB1-205ENST00000561743 LINC00479Q96M42 142 aa9.17□□□□□ -0.94
USB1-205ENST00000561743 APOBP04114 4563 aaKnown RBP9.17□□□□□ -0.94
USB1-205ENST00000561743 TRAV34A0A0B4J273 112 aa9.16□□□□□ -0.94
USB1-205ENST00000561743 DNAH10OSP0CZ25 163 aa9.16□□□□□ -0.94
USB1-205ENST00000561743 RNASE3P12724 160 aaKnown RBP9.16□□□□□ -0.94
USB1-205ENST00000561743 UBE2G2P60604 165 aa9.16□□□□□ -0.94
USB1-205ENST00000561743 RGS21Q2M5E4 152 aa9.16□□□□□ -0.94
USB1-205ENST00000561743 SAPCD1Q5SSQ6 148 aa9.16□□□□□ -0.94
USB1-205ENST00000561743 CFAP126Q5VTH2 177 aa9.16□□□□□ -0.94
USB1-205ENST00000561743 TRAV9-2A0A087WT02 112 aa9.15□□□□□ -0.94
USB1-205ENST00000561743 PGPEP1LA6NFU8 196 aa9.15□□□□□ -0.94
USB1-205ENST00000561743 K7EP13 123 aa9.15□□□□□ -0.94
USB1-205ENST00000561743 ARPC5O15511 151 aa9.15□□□□□ -0.94
USB1-205ENST00000561743 RS1O15537 224 aa9.15□□□□□ -0.94
USB1-205ENST00000561743 FGF8P55075 233 aaPredicted RBP9.15□□□□□ -0.94
USB1-205ENST00000561743 ZNF506Q5JVG8 444 aa9.15□□□□□ -0.94
USB1-205ENST00000561743 SH2D6Q7Z4S9 175 aa9.15□□□□□ -0.94
USB1-205ENST00000561743 SLC25A29Q8N8R3 303 aa9.15□□□□□ -0.94
USB1-205ENST00000561743 NHLRC2Q8NBF2 726 aa9.15□□□□□ -0.94
USB1-205ENST00000561743 CYTL1Q9NRR1 136 aa9.15□□□□□ -0.94
USB1-205ENST00000561743 ARL2-SNX15V9GYD0 113 aa9.15□□□□□ -0.94
USB1-205ENST00000561743 IGHV3-73A0A0B4J1V6 119 aa9.14□□□□□ -0.95
USB1-205ENST00000561743 IGKV3D-20A0A0C4DH25 116 aa9.14□□□□□ -0.95
USB1-205ENST00000561743 FAM74A7A6NL05 159 aa9.14□□□□□ -0.95
USB1-205ENST00000561743 PEX7O00628 323 aa9.14□□□□□ -0.95
USB1-205ENST00000561743 IFNA7P01567 189 aa9.14□□□□□ -0.95
USB1-205ENST00000561743 EVI2AP22794 236 aa9.14□□□□□ -0.95
USB1-205ENST00000561743 TIRAPP58753 221 aa9.14□□□□□ -0.95
USB1-205ENST00000561743 AKR1C8PQ5T2L2 129 aa9.14□□□□□ -0.95
USB1-205ENST00000561743 Q86TA4 180 aa9.14□□□□□ -0.95
USB1-205ENST00000561743 NFE4Q86UQ8 179 aa9.14□□□□□ -0.95
USB1-205ENST00000561743 MAPKAPK5-AS1Q8N8E1 139 aa9.14□□□□□ -0.95
USB1-205ENST00000561743 PTH2Q96A98 100 aa9.14□□□□□ -0.95
USB1-205ENST00000561743 MSRB1Q9NZV6 116 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms