RNA–Protein interactions for RNA: ENST00000560901.5

DCAF11-233, Transcript of DDB1 and CUL4 associated factor 11, human

TSL 3

Gene DCAF11, Length 603 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCAF11-233	ENST00000560901		K7EQM0	130 aa		11.83	□□□□□ -0.52
DCAF11-233	ENST00000560901	TNP2	Q05952	138 aa		11.83	□□□□□ -0.52
DCAF11-233	ENST00000560901	C8orf49	Q96NF6	230 aa		11.83	□□□□□ -0.52
DCAF11-233	ENST00000560901	GNRH2	O43555	120 aa		11.82	□□□□□ -0.52
DCAF11-233	ENST00000560901	TYMS	P04818	313 aa		11.82	□□□□□ -0.52
DCAF11-233	ENST00000560901	SFTA3	P0C7M3	94 aa		11.82	□□□□□ -0.52
DCAF11-233	ENST00000560901	SUMO1	P63165	101 aa	Known RBP	11.82	□□□□□ -0.52
DCAF11-233	ENST00000560901	ZNF726P1	Q15940	193 aa		11.82	□□□□□ -0.52
DCAF11-233	ENST00000560901	ZNF575	Q86XF7	245 aa		11.82	□□□□□ -0.52
DCAF11-233	ENST00000560901	IQCF2	Q8IXL9	164 aa		11.82	□□□□□ -0.52
DCAF11-233	ENST00000560901	SDF2L1	Q9HCN8	221 aa		11.82	□□□□□ -0.52
DCAF11-233	ENST00000560901	EPDR1	Q9UM22	224 aa		11.82	□□□□□ -0.52
DCAF11-233	ENST00000560901	TRGV4	A0A0C4DH28	118 aa		11.81	□□□□□ -0.52
DCAF11-233	ENST00000560901		A0A1W2PPQ1	181 aa		11.81	□□□□□ -0.52
DCAF11-233	ENST00000560901		M0R2P5	195 aa		11.81	□□□□□ -0.52
DCAF11-233	ENST00000560901	ARPC5	O15511	151 aa		11.81	□□□□□ -0.52
DCAF11-233	ENST00000560901	IGLV2-11	P01706	119 aa		11.81	□□□□□ -0.52
DCAF11-233	ENST00000560901	CYB561D1	Q8N8Q1	229 aa		11.81	□□□□□ -0.52
DCAF11-233	ENST00000560901	ZNF479	Q96JC4	524 aa		11.81	□□□□□ -0.52
DCAF11-233	ENST00000560901	KCNS1	Q96KK3	526 aa		11.81	□□□□□ -0.52
DCAF11-233	ENST00000560901	PSG8	Q9UQ74	426 aa		11.81	□□□□□ -0.52
DCAF11-233	ENST00000560901	CTXND1	A0A1B0GTU2	59 aa		11.8	□□□□□ -0.52
DCAF11-233	ENST00000560901		A0A1W2PRE2	83 aa		11.8	□□□□□ -0.52
DCAF11-233	ENST00000560901	TAAR5	O14804	337 aa		11.8	□□□□□ -0.52
DCAF11-233	ENST00000560901	FLI1	Q01543	452 aa	Predicted RBP	11.8	□□□□□ -0.52
DCAF11-233	ENST00000560901	MRPL23	Q16540	153 aa	Known RBP	11.8	□□□□□ -0.52
DCAF11-233	ENST00000560901	TMEM75	Q8N9X5	138 aa		11.8	□□□□□ -0.52
DCAF11-233	ENST00000560901	TRAV4	A0A0B4J268	109 aa		11.79	□□□□□ -0.52
DCAF11-233	ENST00000560901	GCG	P01275	180 aa		11.79	□□□□□ -0.52
DCAF11-233	ENST00000560901	ZNF80	P51504	273 aa	Predicted RBP	11.79	□□□□□ -0.52
DCAF11-233	ENST00000560901	AKR1C8P	Q5T2L2	129 aa		11.79	□□□□□ -0.52
DCAF11-233	ENST00000560901	PRNT	Q86SH4	94 aa		11.79	□□□□□ -0.52
DCAF11-233	ENST00000560901	FBLL1	A6NHQ2	334 aa	Known RBP	11.78	□□□□□ -0.52
DCAF11-233	ENST00000560901	NXPH4	O95158	308 aa		11.78	□□□□□ -0.52
DCAF11-233	ENST00000560901	PFN1	P07737	140 aa	Known RBP	11.78	□□□□□ -0.52
DCAF11-233	ENST00000560901	ZFP69	Q49AA0	526 aa		11.78	□□□□□ -0.52
DCAF11-233	ENST00000560901	CYTL1	Q9NRR1	136 aa		11.78	□□□□□ -0.52
DCAF11-233	ENST00000560901	C11orf21	Q9P2W6	132 aa		11.78	□□□□□ -0.52
DCAF11-233	ENST00000560901	SMLR1	H3BR10	107 aa		11.77	□□□□□ -0.53
DCAF11-233	ENST00000560901		K7EQD1	137 aa		11.77	□□□□□ -0.53
DCAF11-233	ENST00000560901	SIVA1	O15304	175 aa		11.77	□□□□□ -0.53
DCAF11-233	ENST00000560901	FGF8	P55075	233 aa	Predicted RBP	11.77	□□□□□ -0.53
DCAF11-233	ENST00000560901	SMUG1	Q53HV7	270 aa		11.77	□□□□□ -0.53
DCAF11-233	ENST00000560901	LYPD5	Q6UWN5	251 aa		11.77	□□□□□ -0.53
DCAF11-233	ENST00000560901	NEGR1	Q7Z3B1	354 aa		11.77	□□□□□ -0.53
DCAF11-233	ENST00000560901	OR4C5	Q8NGB2	326 aa		11.77	□□□□□ -0.53
DCAF11-233	ENST00000560901	C16orf90	A8MZG2	172 aa		11.76	□□□□□ -0.53
DCAF11-233	ENST00000560901	ORM1	P02763	201 aa		11.76	□□□□□ -0.53
DCAF11-233	ENST00000560901	GYPE	P15421	78 aa		11.76	□□□□□ -0.53
DCAF11-233	ENST00000560901	BTF3	P20290	206 aa	Known RBP	11.76	□□□□□ -0.53
DCAF11-233	ENST00000560901	SRI	P30626	198 aa		11.76	□□□□□ -0.53
DCAF11-233	ENST00000560901	UBE2G2	P60604	165 aa		11.76	□□□□□ -0.53
DCAF11-233	ENST00000560901	SAPCD1	Q5SSQ6	148 aa		11.76	□□□□□ -0.53
DCAF11-233	ENST00000560901	PCNP	Q8WW12	178 aa	Known RBP	11.76	□□□□□ -0.53
DCAF11-233	ENST00000560901	LINC00479	Q96M42	142 aa		11.76	□□□□□ -0.53
DCAF11-233	ENST00000560901	TRAV34	A0A0B4J273	112 aa		11.75	□□□□□ -0.53
DCAF11-233	ENST00000560901	FAM74A7	A6NL05	159 aa		11.75	□□□□□ -0.53
DCAF11-233	ENST00000560901		C9JCJ5	164 aa		11.75	□□□□□ -0.53
DCAF11-233	ENST00000560901	IFNA7	P01567	189 aa		11.75	□□□□□ -0.53
DCAF11-233	ENST00000560901	NKX6-2	Q9C056	277 aa	Predicted RBP	11.75	□□□□□ -0.53
DCAF11-233	ENST00000560901	MAP1LC3B2	A6NCE7	125 aa		11.74	□□□□□ -0.53
DCAF11-233	ENST00000560901	PEX7	O00628	323 aa		11.74	□□□□□ -0.53
DCAF11-233	ENST00000560901	PPT1	P50897	306 aa		11.74	□□□□□ -0.53
DCAF11-233	ENST00000560901	ZNF345	Q14585	488 aa		11.74	□□□□□ -0.53
DCAF11-233	ENST00000560901	ZNF876P	Q49A33	203 aa		11.74	□□□□□ -0.53
DCAF11-233	ENST00000560901	C9orf85	Q96MD7	179 aa		11.74	□□□□□ -0.53
DCAF11-233	ENST00000560901	MAP1LC3B	Q9GZQ8	125 aa		11.74	□□□□□ -0.53
DCAF11-233	ENST00000560901	ARL2-SNX15	V9GYD0	113 aa		11.74	□□□□□ -0.53
DCAF11-233	ENST00000560901	CDK2AP2	O75956	126 aa		11.73	□□□□□ -0.53
DCAF11-233	ENST00000560901	LINC00315	P59091	139 aa		11.73	□□□□□ -0.53
DCAF11-233	ENST00000560901	KCNRG	Q8N5I3	272 aa		11.73	□□□□□ -0.53
DCAF11-233	ENST00000560901	HIST1H2BA	Q96A08	127 aa		11.73	□□□□□ -0.53
DCAF11-233	ENST00000560901	LRP1B	Q9NZR2	4599 aa		11.73	□□□□□ -0.53
DCAF11-233	ENST00000560901	RYR1	P21817	5038 aa		11.72	□□□□□ -0.53
DCAF11-233	ENST00000560901	GATA1	P15976	413 aa	Predicted RBP	11.72	□□□□□ -0.53
DCAF11-233	ENST00000560901		Q86TA4	180 aa		11.72	□□□□□ -0.53
DCAF11-233	ENST00000560901	TXNDC17	Q9BRA2	123 aa		11.72	□□□□□ -0.53
DCAF11-233	ENST00000560901	LOC100131303	A0A0U1RQF7	123 aa		11.71	□□□□□ -0.53
DCAF11-233	ENST00000560901	RNASE3	P12724	160 aa	Known RBP	11.71	□□□□□ -0.53
DCAF11-233	ENST00000560901	FHIT	P49789	147 aa		11.71	□□□□□ -0.53
DCAF11-233	ENST00000560901	CFAP126	Q5VTH2	177 aa		11.71	□□□□□ -0.53
DCAF11-233	ENST00000560901	OR11H4	Q8NGC9	324 aa		11.71	□□□□□ -0.53
DCAF11-233	ENST00000560901	IGKV3D-20	A0A0C4DH25	116 aa		11.7	□□□□□ -0.54
DCAF11-233	ENST00000560901	HMSD	A8MTL9	139 aa		11.7	□□□□□ -0.54
DCAF11-233	ENST00000560901	RS1	O15537	224 aa		11.7	□□□□□ -0.54
DCAF11-233	ENST00000560901	ZNF506	Q5JVG8	444 aa		11.7	□□□□□ -0.54
DCAF11-233	ENST00000560901	DPPA3	Q6W0C5	159 aa		11.7	□□□□□ -0.54
DCAF11-233	ENST00000560901	STOML3	Q8TAV4	291 aa		11.7	□□□□□ -0.54
DCAF11-233	ENST00000560901	PTH2	Q96A98	100 aa		11.7	□□□□□ -0.54
DCAF11-233	ENST00000560901	PGPEP1L	A6NFU8	196 aa		11.69	□□□□□ -0.54
DCAF11-233	ENST00000560901	FABP5P3	A8MUU1	101 aa		11.69	□□□□□ -0.54
DCAF11-233	ENST00000560901	CIDEA	O60543	219 aa		11.69	□□□□□ -0.54
DCAF11-233	ENST00000560901		Q6ZRN7	208 aa	Predicted RBP	11.69	□□□□□ -0.54
DCAF11-233	ENST00000560901	SH2D6	Q7Z4S9	175 aa		11.69	□□□□□ -0.54
DCAF11-233	ENST00000560901	WFDC10B	Q8IUB3	73 aa		11.69	□□□□□ -0.54
DCAF11-233	ENST00000560901	KRTAP4-5	Q9BYR2	181 aa		11.69	□□□□□ -0.54
DCAF11-233	ENST00000560901	LY96	Q9Y6Y9	160 aa		11.69	□□□□□ -0.54
DCAF11-233	ENST00000560901	ABCA13	Q86UQ4	5058 aa		11.68	□□□□□ -0.54
DCAF11-233	ENST00000560901		A0A0D9SG52	128 aa		11.68	□□□□□ -0.54
DCAF11-233	ENST00000560901	SEC11B	P0C7V7	166 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms