RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 DSCR9P59020 149 aa3.23□□□□□ -1.89
HMGB3P26-201ENST00000560051 KRTAP10-6P60371 365 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P26-201ENST00000560051 RBM3P98179 157 aaKnown RBP3.23□□□□□ -1.89
HMGB3P26-201ENST00000560051 BSPH1Q075Z2 132 aa3.23□□□□□ -1.89
HMGB3P26-201ENST00000560051 ESRGQ1W209 222 aa3.23□□□□□ -1.89
HMGB3P26-201ENST00000560051 C2orf66Q6UXQ4 117 aa3.23□□□□□ -1.89
HMGB3P26-201ENST00000560051 CLEC2BQ92478 149 aa3.23□□□□□ -1.89
HMGB3P26-201ENST00000560051 CHCHD1Q96BP2 118 aaKnown RBP3.23□□□□□ -1.89
HMGB3P26-201ENST00000560051 ZNF71Q9NQZ8 489 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P26-201ENST00000560051 BAZ2BQ9UIF8 2168 aaKnown RBP3.23□□□□□ -1.89
HMGB3P26-201ENST00000560051 CSAG2Q9Y5P2 127 aa3.23□□□□□ -1.89
HMGB3P26-201ENST00000560051 ZFC3H1O60293 1989 aaKnown RBP3.23□□□□□ -1.89
HMGB3P26-201ENST00000560051 PLCH1Q4KWH8 1693 aa3.23□□□□□ -1.89
HMGB3P26-201ENST00000560051 GON4LQ3T8J9 2241 aa3.23□□□□□ -1.89
HMGB3P26-201ENST00000560051 DOCK9Q9BZ29 2069 aa3.23□□□□□ -1.89
HMGB3P26-201ENST00000560051 ANKRD36CQ5JPF3 1778 aa3.23□□□□□ -1.89
HMGB3P26-201ENST00000560051 NUP188Q5SRE5 1749 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 PTPRBP23467 1997 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 NUP98P52948 1817 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 MYO7AQ13402 2215 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 IGKV6D-21A0A0A0MT36 114 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 MYMXA0A1B0GTQ4 84 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 A0A1B0GWA3 101 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 A6NIN4 97 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 C2orf70A6NJV1 201 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 PRH1P02810 166 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 IGKV1-16P04430 117 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 GCHFRP30047 84 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 PEBP1P30086 187 aaKnown RBP3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 UBE2D3P61077 147 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 UBE2D2P62837 147 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 DAZAP2Q15038 168 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 ZNF56Q15929 161 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 CEMP1Q6PRD7 247 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 RNASE6Q93091 150 aaKnown RBP3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 TMEM141Q96I45 108 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 TP53TG3Q9ULZ0 132 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 NACAE9PAV3 2078 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 NEXMIFQ5QGS0 1516 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 MAST2Q6P0Q8 1798 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 PLXNA1Q9UIW2 1896 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 GTF3C1Q12789 2109 aa3.22□□□□□ -1.89
HMGB3P26-201ENST00000560051 IGLV1-50A0A075B6I6 118 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 IGHV3-43A0A0B4J1X8 118 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 IGHV1OR15-9A0A0B4J2B8 117 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 LY6G6EA0A0G2JKS1 128 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 SRRM5B3KS81 715 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 H7BZZ5 65 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 K7ERS5 55 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 CPSF4O95639 269 aaKnown RBP3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 IGHV3-13P01766 116 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 IGHV3-30-3P0DP02 117 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 LMO2P25791 158 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 EFNA4P52798 201 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 DSCR4P56555 118 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 DYNLT1P63172 113 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 EGFEM1PQ0D2K5 195 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 KIAA2026Q5HYC2 2103 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 REG3GQ6UW15 175 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 SOSTDC1Q6X4U4 206 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 ZNF497Q6ZNH5 498 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 C16orf47Q6ZP98 133 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 C18orf65Q6ZTR6 163 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 CAMK2N1Q7Z7J9 78 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 RPRMLQ8N4K4 120 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 B9D2Q9BPU9 175 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 NABP2Q9BQ15 211 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 SMIM7Q9BQ49 75 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 TXNDC17Q9BRA2 123 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 SND1-IT1Q9HBX3 110 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 FMN2Q9NZ56 1722 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 ERCC6L2Q5T890 1561 aa3.21□□□□□ -1.9
HMGB3P26-201ENST00000560051 TRBV7-3A0A075B6L6 115 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 A0A087WW49 117 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 A0A0B4J2C4 111 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 IGKV6-21A0A0C4DH24 114 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 IGHV3-35A0A0C4DH35 117 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 IGKV1-12A0A0C4DH73 117 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 IGLV5-39A0A0G2JS06 123 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 LINC01548A6NM66 108 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 H3BMM0 161 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 SLC25A20O43772 301 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 IGKV1D-12P01611 117 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 TSPEAR-AS2P59090 65 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 REG3AQ06141 175 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 ZNF816Q0VGE8 651 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 C10orf25Q5T742 122 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 ATP5EP2Q5VTU8 51 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 UBE2WQ96B02 151 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 ZNF524Q96C55 264 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 PRAC1Q96KF2 57 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 PLA2G12AQ9BZM1 189 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 CMC2Q9NRP2 79 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 GNG13Q9P2W3 67 aa3.2□□□□□ -1.9
HMGB3P26-201ENST00000560051 TULP4Q9NRJ4 1543 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 KIF21BO75037 1637 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 ALKQ9UM73 1620 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 COL5A3P25940 1745 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 TJP1Q07157 1748 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 TSC2P49815 1807 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms