RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 SMIM12Q96EX1 92 aa10.65□□□□□ -0.7
RABGGTA-209ENST00000559551 KCNS1Q96KK3 526 aa10.65□□□□□ -0.7
RABGGTA-209ENST00000559551 CTRLP40313 264 aa10.65□□□□□ -0.7
RABGGTA-209ENST00000559551 KRTDAPP60985 99 aa10.65□□□□□ -0.7
RABGGTA-209ENST00000559551 DMRTA1Q5VZB9 504 aa10.65□□□□□ -0.7
RABGGTA-209ENST00000559551 PRR27Q6MZM9 219 aa10.65□□□□□ -0.7
RABGGTA-209ENST00000559551 COX8CQ7Z4L0 72 aa10.65□□□□□ -0.7
RABGGTA-209ENST00000559551 OR8A1Q8NGG7 326 aa10.65□□□□□ -0.7
RABGGTA-209ENST00000559551 NPIPB6E9PJ23 425 aa10.64□□□□□ -0.71
RABGGTA-209ENST00000559551 IGLV1-51P01701 117 aa10.64□□□□□ -0.71
RABGGTA-209ENST00000559551 PF4P02776 101 aa10.64□□□□□ -0.71
RABGGTA-209ENST00000559551 CT45A10P0DMU9 189 aa10.64□□□□□ -0.71
RABGGTA-209ENST00000559551 SPATA45Q537H7 98 aa10.64□□□□□ -0.71
RABGGTA-209ENST00000559551 RBPMS2Q6ZRY4 209 aaKnown RBP10.64□□□□□ -0.71
RABGGTA-209ENST00000559551 NUDT10Q8NFP7 164 aa10.64□□□□□ -0.71
RABGGTA-209ENST00000559551 NUDT11Q96G61 164 aa10.64□□□□□ -0.71
RABGGTA-209ENST00000559551 OSTCQ9NRP0 149 aa10.64□□□□□ -0.71
RABGGTA-209ENST00000559551 ZNF492Q9P255 531 aa10.64□□□□□ -0.71
RABGGTA-209ENST00000559551 SAP30O75446 220 aa10.64□□□□□ -0.71
RABGGTA-209ENST00000559551 ID1P41134 155 aa10.64□□□□□ -0.71
RABGGTA-209ENST00000559551 Q8N976 141 aa10.64□□□□□ -0.71
RABGGTA-209ENST00000559551 ORAOV1Q8WV07 137 aa10.64□□□□□ -0.71
RABGGTA-209ENST00000559551 TRAV2A0A0B4J234 112 aa10.63□□□□□ -0.71
RABGGTA-209ENST00000559551 CA1P00915 261 aaPredicted RBP10.63□□□□□ -0.71
RABGGTA-209ENST00000559551 AMTP48728 403 aa10.63□□□□□ -0.71
RABGGTA-209ENST00000559551 HIST1H1AQ02539 215 aaPredicted RBP10.63□□□□□ -0.71
RABGGTA-209ENST00000559551 IBA57Q5T440 356 aaKnown RBP10.63□□□□□ -0.71
RABGGTA-209ENST00000559551 PRR9Q5T870 116 aa10.63□□□□□ -0.71
RABGGTA-209ENST00000559551 Q6ZQT7 251 aa10.63□□□□□ -0.71
RABGGTA-209ENST00000559551 FAM231DQ6ZW35 169 aa10.63□□□□□ -0.71
RABGGTA-209ENST00000559551 FAM19A4Q96LR4 140 aa10.63□□□□□ -0.71
RABGGTA-209ENST00000559551 NAT8BQ9UHF3 227 aa10.63□□□□□ -0.71
RABGGTA-209ENST00000559551 PCP4P48539 62 aa10.62□□□□□ -0.71
RABGGTA-209ENST00000559551 HNRNPA3P51991 378 aaKnown RBP10.62□□□□□ -0.71
RABGGTA-209ENST00000559551 ZNF138P52744 262 aa10.62□□□□□ -0.71
RABGGTA-209ENST00000559551 KIR3DS1Q14943 382 aa10.62□□□□□ -0.71
RABGGTA-209ENST00000559551 SAMD13Q5VXD3 122 aa10.62□□□□□ -0.71
RABGGTA-209ENST00000559551 TRAV25A0A0B4J276 109 aa10.62□□□□□ -0.71
RABGGTA-209ENST00000559551 A0A0J9YX75 114 aa10.62□□□□□ -0.71
RABGGTA-209ENST00000559551 F2Z2F3 143 aa10.62□□□□□ -0.71
RABGGTA-209ENST00000559551 HLA-DQA1P01909 254 aa10.62□□□□□ -0.71
RABGGTA-209ENST00000559551 IGLC3P0DOY3 106 aa10.62□□□□□ -0.71
RABGGTA-209ENST00000559551 ZNF575Q86XF7 245 aa10.62□□□□□ -0.71
RABGGTA-209ENST00000559551 SPAG8Q99932 426 aaPredicted RBP10.62□□□□□ -0.71
RABGGTA-209ENST00000559551 ZNF747Q9BV97 191 aa10.62□□□□□ -0.71
RABGGTA-209ENST00000559551 MAP6D1Q9H9H5 199 aa10.62□□□□□ -0.71
RABGGTA-209ENST00000559551 C20orf202A1L168 122 aa10.61□□□□□ -0.71
RABGGTA-209ENST00000559551 FBLL1A6NHQ2 334 aaKnown RBP10.61□□□□□ -0.71
RABGGTA-209ENST00000559551 ZNF324O75467 553 aaPredicted RBP10.61□□□□□ -0.71
RABGGTA-209ENST00000559551 DEFB131AP59861 70 aa10.61□□□□□ -0.71
RABGGTA-209ENST00000559551 SNRPD3P62318 126 aaKnown RBP10.61□□□□□ -0.71
RABGGTA-209ENST00000559551 ODF3L2Q3SX64 289 aa10.61□□□□□ -0.71
RABGGTA-209ENST00000559551 TMEM78Q5T7P6 136 aa10.61□□□□□ -0.71
RABGGTA-209ENST00000559551 Q6ZN92 141 aa10.61□□□□□ -0.71
RABGGTA-209ENST00000559551 TMEM136Q6ZRR5 245 aa10.61□□□□□ -0.71
RABGGTA-209ENST00000559551 ZFAND2AQ8N6M9 145 aa10.61□□□□□ -0.71
RABGGTA-209ENST00000559551 MDFIQ99750 246 aa10.61□□□□□ -0.71
RABGGTA-209ENST00000559551 LAMTOR2Q9Y2Q5 125 aa10.61□□□□□ -0.71
RABGGTA-209ENST00000559551 PKD1L1Q8TDX9 2849 aa10.61□□□□□ -0.71
RABGGTA-209ENST00000559551 SAPCD1Q5SSQ6 148 aa10.61□□□□□ -0.71
RABGGTA-209ENST00000559551 OR10J6PQ8NGY7 276 aa10.61□□□□□ -0.71
RABGGTA-209ENST00000559551 LINC00477Q96M19 166 aa10.6□□□□□ -0.71
RABGGTA-209ENST00000559551 KNCNA6PVL3 124 aa10.59□□□□□ -0.71
RABGGTA-209ENST00000559551 SH2D1AO60880 128 aa10.59□□□□□ -0.71
RABGGTA-209ENST00000559551 PMCHP20382 165 aa10.59□□□□□ -0.71
RABGGTA-209ENST00000559551 PMCHL1Q16048 86 aa10.59□□□□□ -0.71
RABGGTA-209ENST00000559551 C11orf21Q9P2W6 132 aa10.59□□□□□ -0.71
RABGGTA-209ENST00000559551 MRPS16Q9Y3D3 137 aaKnown RBP10.59□□□□□ -0.71
RABGGTA-209ENST00000559551 C21orf62-AS1Q17RA5 79 aa10.59□□□□□ -0.71
RABGGTA-209ENST00000559551 APRG1Q8IVJ8 170 aa10.59□□□□□ -0.71
RABGGTA-209ENST00000559551 BORCS7Q96B45 105 aa10.59□□□□□ -0.71
RABGGTA-209ENST00000559551 ANK2Q01484 3957 aa10.58□□□□□ -0.72
RABGGTA-209ENST00000559551 RBMY1BA6NDE4 496 aaKnown RBP10.58□□□□□ -0.72
RABGGTA-209ENST00000559551 RBMY1EA6NEQ0 496 aaKnown RBP10.58□□□□□ -0.72
RABGGTA-209ENST00000559551 OR4C46A6NHA9 309 aa10.58□□□□□ -0.72
RABGGTA-209ENST00000559551 RBMY1DP0C7P1 496 aaKnown RBP10.58□□□□□ -0.72
RABGGTA-209ENST00000559551 C3orf79P0CE67 100 aa10.58□□□□□ -0.72
RABGGTA-209ENST00000559551 RASL11AQ6T310 242 aa10.58□□□□□ -0.72
RABGGTA-209ENST00000559551 AMTNQ6UX39 209 aa10.58□□□□□ -0.72
RABGGTA-209ENST00000559551 FOXI2Q6ZQN5 318 aa10.58□□□□□ -0.72
RABGGTA-209ENST00000559551 STPG4Q8N801 248 aa10.58□□□□□ -0.72
RABGGTA-209ENST00000559551 OR2D3Q8NGH3 330 aa10.58□□□□□ -0.72
RABGGTA-209ENST00000559551 SMIM27A0A1W2PRY6 76 aa10.57□□□□□ -0.72
RABGGTA-209ENST00000559551 SRIP30626 198 aa10.57□□□□□ -0.72
RABGGTA-209ENST00000559551 PTTG1IPP53801 180 aa10.57□□□□□ -0.72
RABGGTA-209ENST00000559551 ANKRD39Q53RE8 183 aa10.57□□□□□ -0.72
RABGGTA-209ENST00000559551 RPP21Q9H633 154 aaKnown RBP10.57□□□□□ -0.72
RABGGTA-209ENST00000559551 C19orf73Q9NVV2 129 aa10.57□□□□□ -0.72
RABGGTA-209ENST00000559551 LENEPQ9Y5L5 61 aa10.57□□□□□ -0.72
RABGGTA-209ENST00000559551 A8MTW9 85 aa10.57□□□□□ -0.72
RABGGTA-209ENST00000559551 J3KRW8 73 aa10.57□□□□□ -0.72
RABGGTA-209ENST00000559551 IGKV3-20P01619 116 aa10.57□□□□□ -0.72
RABGGTA-209ENST00000559551 P01737 135 aa10.57□□□□□ -0.72
RABGGTA-209ENST00000559551 APCSP02743 223 aa10.57□□□□□ -0.72
RABGGTA-209ENST00000559551 FRMD6-AS1P0C7T7 363 aa10.57□□□□□ -0.72
RABGGTA-209ENST00000559551 TCL1AP56279 114 aa10.57□□□□□ -0.72
RABGGTA-209ENST00000559551 BEAN1Q3B7T3 259 aa10.57□□□□□ -0.72
RABGGTA-209ENST00000559551 NIT1Q86X76 327 aa10.57□□□□□ -0.72
RABGGTA-209ENST00000559551 GTSF1Q8WW33 167 aa10.57□□□□□ -0.72
RABGGTA-209ENST00000559551 NDFIP1Q9BT67 221 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms