RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 TRBV7-9A0A0J9YWB2 115 aa3.79□□□□□ -1.8
SMAD3-209ENST00000558894 A0A1W2PPQ1 181 aa3.79□□□□□ -1.8
SMAD3-209ENST00000558894 EIF3GO75821 320 aaKnown RBP eCLIP3.79□□□□□ -1.8
SMAD3-209ENST00000558894 GPX1P07203 203 aa3.79□□□□□ -1.8
SMAD3-209ENST00000558894 OR10J4P0C629 311 aa3.79□□□□□ -1.8
SMAD3-209ENST00000558894 RAB5BP61020 215 aa3.79□□□□□ -1.8
SMAD3-209ENST00000558894 ZNF266Q14584 549 aa3.79□□□□□ -1.8
SMAD3-209ENST00000558894 CLINT1Q14677 625 aa3.79□□□□□ -1.8
SMAD3-209ENST00000558894 LRRC37A5PQ49AS3 106 aa3.79□□□□□ -1.8
SMAD3-209ENST00000558894 IBA57Q5T440 356 aaKnown RBP3.79□□□□□ -1.8
SMAD3-209ENST00000558894 Q8TAT8 98 aa3.79□□□□□ -1.8
SMAD3-209ENST00000558894 PPP1R1CQ8WVI7 109 aa3.79□□□□□ -1.8
SMAD3-209ENST00000558894 MRPL32Q9BYC8 188 aaKnown RBP3.79□□□□□ -1.8
SMAD3-209ENST00000558894 WFDC1Q9HC57 220 aa3.79□□□□□ -1.8
SMAD3-209ENST00000558894 MDFICQ9P1T7 246 aa3.79□□□□□ -1.8
SMAD3-209ENST00000558894 FUT9Q9Y231 359 aa3.79□□□□□ -1.8
SMAD3-209ENST00000558894 HSPB11Q9Y547 144 aa3.79□□□□□ -1.8
SMAD3-209ENST00000558894 TIMM9Q9Y5J7 89 aa3.79□□□□□ -1.8
SMAD3-209ENST00000558894 ALG5Q9Y673 324 aa3.79□□□□□ -1.8
SMAD3-209ENST00000558894 IGHV1OR15-1A0A075B7D0 117 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 TRGV1A0A0A0MS02 117 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 A0A1B0GV90 55 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 RBAKDNA6NC62 111 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 C16orf90A8MZG2 172 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 DIRC3C9JPN6 131 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 INMT-MINDY4F8WBC2 141 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 PRAF2O60831 178 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 MPC2O95563 127 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 ZNF138P52744 262 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 CRYBA4P53673 196 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 RAB2AP61019 212 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 RANP62826 216 aaKnown RBP3.78□□□□□ -1.8
SMAD3-209ENST00000558894 TDRG1Q3Y452 100 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 Q6AWC8 147 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 UQCC3Q6UW78 93 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 LYPD5Q6UWN5 251 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 SMIM15Q7Z3B0 74 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 SPATA12Q7Z6I5 190 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 TVP23CQ96ET8 276 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 ATP5SQ99766 215 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 PAXXQ9BUH6 204 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 SLC25A31Q9H0C2 315 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 AAMDCQ9H7C9 122 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 MRPL16Q9NX20 251 aaKnown RBP3.78□□□□□ -1.8
SMAD3-209ENST00000558894 TNFRSF18Q9Y5U5 241 aa3.78□□□□□ -1.8
SMAD3-209ENST00000558894 C5orf52A6NGY3 159 aa3.77□□□□□ -1.81
SMAD3-209ENST00000558894 TSTD3H0UI37 97 aa3.77□□□□□ -1.81
SMAD3-209ENST00000558894 TEX46H3BTG2 121 aa3.77□□□□□ -1.81
SMAD3-209ENST00000558894 RPL12P30050 165 aaKnown RBP3.77□□□□□ -1.81
SMAD3-209ENST00000558894 RAB5CP51148 216 aa3.77□□□□□ -1.81
SMAD3-209ENST00000558894 CEBPGP53567 150 aa3.77□□□□□ -1.81
SMAD3-209ENST00000558894 LINC00315P59091 139 aa3.77□□□□□ -1.81
SMAD3-209ENST00000558894 CYCSP99999 105 aaKnown RBP3.77□□□□□ -1.81
SMAD3-209ENST00000558894 TMEM78Q5T7P6 136 aa3.77□□□□□ -1.81
SMAD3-209ENST00000558894 WDR73Q6P4I2 378 aa3.77□□□□□ -1.81
SMAD3-209ENST00000558894 Q8N1X5 172 aa3.77□□□□□ -1.81
SMAD3-209ENST00000558894 LYPD1Q8N2G4 141 aa3.77□□□□□ -1.81
SMAD3-209ENST00000558894 STOML3Q8TAV4 291 aa3.77□□□□□ -1.81
SMAD3-209ENST00000558894 TMED6Q8WW62 240 aa3.77□□□□□ -1.81
SMAD3-209ENST00000558894 RASL10AQ92737 203 aa3.77□□□□□ -1.81
SMAD3-209ENST00000558894 C14orf144Q96I85 54 aa3.77□□□□□ -1.81
SMAD3-209ENST00000558894 ZNF479Q96JC4 524 aa3.77□□□□□ -1.81
SMAD3-209ENST00000558894 NKX6-2Q9C056 277 aaPredicted RBP3.77□□□□□ -1.81
SMAD3-209ENST00000558894 MYCBP2O75592 4640 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 TRGV2A0A075B6R0 118 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 IGHV3-16A0A0C4DH30 117 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 C17orf112F2Z3M2 114 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 K7EQD1 137 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 SIVA1O15304 175 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 GNRH2O43555 120 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 OR7C2O60412 319 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 IGHV3-53P01767 116 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 FUSP35637 526 aaKnown RBP eCLIP3.76□□□□□ -1.81
SMAD3-209ENST00000558894 FHITP49789 147 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 PKIAP61925 76 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 UBE2L3P68036 154 aaKnown RBP3.76□□□□□ -1.81
SMAD3-209ENST00000558894 ODF1Q14990 250 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 TTC32Q5I0X7 151 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 FFAR4Q5NUL3 377 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 MUC21Q5SSG8 566 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 SVBPQ8N300 66 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 MAPKAPK5-AS1Q8N8E1 139 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 OR2D3Q8NGH3 330 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 OR10G4Q8NGN3 311 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 C8orf49Q96NF6 230 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 SMIM3Q9BZL3 60 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 TREM1Q9NP99 234 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 KCNIP2Q9NS61 270 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 C11orf21Q9P2W6 132 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 PRO0255Q9UI72 69 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 HHLA3Q9XRX5 114 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 LENEPQ9Y5L5 61 aa3.76□□□□□ -1.81
SMAD3-209ENST00000558894 TRAV8-1A0A0A6YYK1 113 aa3.75□□□□□ -1.81
SMAD3-209ENST00000558894 TMEM218A2RU14 115 aa3.75□□□□□ -1.81
SMAD3-209ENST00000558894 PGPA6NDG6 321 aa3.75□□□□□ -1.81
SMAD3-209ENST00000558894 PAX4O43316 350 aa3.75□□□□□ -1.81
SMAD3-209ENST00000558894 NXPH4O95158 308 aa3.75□□□□□ -1.81
SMAD3-209ENST00000558894 IGLV2-11P01706 119 aa3.75□□□□□ -1.81
SMAD3-209ENST00000558894 TYMSP04818 313 aa3.75□□□□□ -1.81
SMAD3-209ENST00000558894 SFTA3P0C7M3 94 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms