RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 LYRM9A8MSI8 78 aa9.35□□□□□ -0.91
NEK9-210ENST00000557026 H0YGX0 51 aa9.35□□□□□ -0.91
NEK9-210ENST00000557026 C3orf79P0CE67 100 aa9.35□□□□□ -0.91
NEK9-210ENST00000557026 C15orf53Q8NAA6 179 aa9.35□□□□□ -0.91
NEK9-210ENST00000557026 I3L2K1 104 aa9.35□□□□□ -0.91
NEK9-210ENST00000557026 GSN-AS1Q9NRJ2 163 aa9.35□□□□□ -0.91
NEK9-210ENST00000557026 CACNA1HO95180 2353 aa9.34□□□□□ -0.91
NEK9-210ENST00000557026 IGHV3-16A0A0C4DH30 117 aa9.34□□□□□ -0.91
NEK9-210ENST00000557026 SIGMAR1Q99720 223 aa9.34□□□□□ -0.91
NEK9-210ENST00000557026 AGPAT4-IT1Q9H0P7 198 aa9.34□□□□□ -0.91
NEK9-210ENST00000557026 NCOR1O75376 2440 aa9.34□□□□□ -0.91
NEK9-210ENST00000557026 DIDO1Q9BTC0 2240 aaKnown RBP9.34□□□□□ -0.91
NEK9-210ENST00000557026 COLCA2A8K830 154 aa9.34□□□□□ -0.91
NEK9-210ENST00000557026 BUB3O43684 328 aa9.34□□□□□ -0.91
NEK9-210ENST00000557026 NDUFB1O75438 58 aa9.34□□□□□ -0.91
NEK9-210ENST00000557026 COL6A6A6NMZ7 2263 aa9.34□□□□□ -0.91
NEK9-210ENST00000557026 MRAPQ8TCY5 172 aa9.34□□□□□ -0.91
NEK9-210ENST00000557026 IGKV1-39P01597 117 aa9.34□□□□□ -0.92
NEK9-210ENST00000557026 IGLV1-47P01700 117 aa9.34□□□□□ -0.92
NEK9-210ENST00000557026 IGKV1D-39P04432 117 aa9.34□□□□□ -0.92
NEK9-210ENST00000557026 GYPEP15421 78 aa9.34□□□□□ -0.92
NEK9-210ENST00000557026 FUSP35637 526 aaKnown RBP eCLIP9.34□□□□□ -0.92
NEK9-210ENST00000557026 SPTBN1Q01082 2364 aaKnown RBP9.33□□□□□ -0.92
NEK9-210ENST00000557026 F8W735 103 aaPredicted RBP9.33□□□□□ -0.92
NEK9-210ENST00000557026 C9orf47Q6ZRZ4 202 aa9.33□□□□□ -0.92
NEK9-210ENST00000557026 ZFAND6Q6FIF0 208 aa9.33□□□□□ -0.92
NEK9-210ENST00000557026 WDR81Q562E7 1941 aa9.33□□□□□ -0.92
NEK9-210ENST00000557026 TRAV12-2A0A075B6T6 113 aa9.33□□□□□ -0.92
NEK9-210ENST00000557026 PFN2P35080 140 aa9.33□□□□□ -0.92
NEK9-210ENST00000557026 PRO0255Q9UI72 69 aa9.33□□□□□ -0.92
NEK9-210ENST00000557026 TMEM213A2RRL7 107 aa9.32□□□□□ -0.92
NEK9-210ENST00000557026 GRNP28799 593 aaKnown RBP9.32□□□□□ -0.92
NEK9-210ENST00000557026 SLURP1P55000 103 aa9.32□□□□□ -0.92
NEK9-210ENST00000557026 TMEM263Q8WUH6 116 aaKnown RBP9.32□□□□□ -0.92
NEK9-210ENST00000557026 HIST1H4AP62805 103 aaKnown RBP9.32□□□□□ -0.92
NEK9-210ENST00000557026 DUX4L9Q6RFH8 374 aaPredicted RBP9.32□□□□□ -0.92
NEK9-210ENST00000557026 NFE4Q86UQ8 179 aa9.32□□□□□ -0.92
NEK9-210ENST00000557026 SPRY2O43597 315 aa9.32□□□□□ -0.92
NEK9-210ENST00000557026 C18orf32Q8TCD1 76 aa9.32□□□□□ -0.92
NEK9-210ENST00000557026 TPSG1Q9NRR2 321 aa9.32□□□□□ -0.92
NEK9-210ENST00000557026 PTPRDP23468 1912 aa9.32□□□□□ -0.92
NEK9-210ENST00000557026 ALPK2Q86TB3 2170 aa9.31□□□□□ -0.92
NEK9-210ENST00000557026 TRAV8-3A0A0A6YYJ7 113 aa9.31□□□□□ -0.92
NEK9-210ENST00000557026 WI2-2373I1.2A0A1W2PRP0 233 aa9.31□□□□□ -0.92
NEK9-210ENST00000557026 DNAJC9-AS1A6NH13 148 aa9.31□□□□□ -0.92
NEK9-210ENST00000557026 NDUFS7O75251 213 aa9.31□□□□□ -0.92
NEK9-210ENST00000557026 Q6YL49 198 aa9.31□□□□□ -0.92
NEK9-210ENST00000557026 LRRK1Q38SD2 2015 aa9.31□□□□□ -0.92
NEK9-210ENST00000557026 J3QQQ9 107 aa9.31□□□□□ -0.92
NEK9-210ENST00000557026 K7EIM0 57 aa9.31□□□□□ -0.92
NEK9-210ENST00000557026 IGHG4P01861 327 aa9.31□□□□□ -0.92
NEK9-210ENST00000557026 LINC01548A6NM66 108 aa9.31□□□□□ -0.92
NEK9-210ENST00000557026 MDC1Q14676 2089 aaKnown RBP9.31□□□□□ -0.92
NEK9-210ENST00000557026 H7C423 109 aa9.31□□□□□ -0.92
NEK9-210ENST00000557026 FNDC4Q9H6D8 234 aaPredicted RBP9.31□□□□□ -0.92
NEK9-210ENST00000557026 LINC00574Q9H8X3 128 aa9.31□□□□□ -0.92
NEK9-210ENST00000557026 PRB1P04280 392 aa9.3□□□□□ -0.92
NEK9-210ENST00000557026 RNF144BQ7Z419 303 aa9.3□□□□□ -0.92
NEK9-210ENST00000557026 CFHR4Q92496 578 aa9.3□□□□□ -0.92
NEK9-210ENST00000557026 V9GYV3 84 aa9.3□□□□□ -0.92
NEK9-210ENST00000557026 NLRC5Q86WI3 1866 aa9.3□□□□□ -0.92
NEK9-210ENST00000557026 SMKR1H3BMG3 65 aa9.3□□□□□ -0.92
NEK9-210ENST00000557026 CTSGP08311 255 aa9.3□□□□□ -0.92
NEK9-210ENST00000557026 ZC2HC1AQ96GY0 325 aa9.3□□□□□ -0.92
NEK9-210ENST00000557026 IGHV4OR15-8A0A075B7B6 117 aa9.3□□□□□ -0.92
NEK9-210ENST00000557026 A0A087WW49 117 aa9.3□□□□□ -0.92
NEK9-210ENST00000557026 Q8NA96 180 aa9.3□□□□□ -0.92
NEK9-210ENST00000557026 SPTBN2O15020 2390 aa9.3□□□□□ -0.92
NEK9-210ENST00000557026 HLA-DMBP28068 263 aa9.3□□□□□ -0.92
NEK9-210ENST00000557026 LINC00205P59089 165 aa9.3□□□□□ -0.92
NEK9-210ENST00000557026 TRAV4A0A0B4J268 109 aa9.29□□□□□ -0.92
NEK9-210ENST00000557026 SRSF3P84103 164 aaKnown RBP9.29□□□□□ -0.92
NEK9-210ENST00000557026 IGF1P05019 195 aa9.29□□□□□ -0.92
NEK9-210ENST00000557026 ANAPC13Q9BS18 74 aa9.29□□□□□ -0.92
NEK9-210ENST00000557026 PRO1854Q9UHT4 67 aa9.29□□□□□ -0.92
NEK9-210ENST00000557026 HHLA3Q9XRX5 114 aa9.29□□□□□ -0.92
NEK9-210ENST00000557026 TRBV7-3A0A075B6L6 115 aa9.29□□□□□ -0.92
NEK9-210ENST00000557026 PRR31Q5SQ13 230 aa9.29□□□□□ -0.92
NEK9-210ENST00000557026 ZNF581Q9P0T4 197 aa9.29□□□□□ -0.92
NEK9-210ENST00000557026 DYNAPQ8N1N2 210 aa9.28□□□□□ -0.92
NEK9-210ENST00000557026 GAGE2AQ6NT46 116 aa9.28□□□□□ -0.92
NEK9-210ENST00000557026 C11orf45Q8TAV5 145 aa9.28□□□□□ -0.92
NEK9-210ENST00000557026 RNF183Q96D59 192 aa9.28□□□□□ -0.92
NEK9-210ENST00000557026 A0A0J9YY99 117 aa9.28□□□□□ -0.92
NEK9-210ENST00000557026 IGHV4-31P0DP07 118 aa9.28□□□□□ -0.92
NEK9-210ENST00000557026 KIR3DS1Q14943 382 aa9.28□□□□□ -0.92
NEK9-210ENST00000557026 ACYP1P07311 99 aa9.27□□□□□ -0.92
NEK9-210ENST00000557026 MIFP14174 115 aa9.27□□□□□ -0.92
NEK9-210ENST00000557026 PDE6GP18545 87 aa9.27□□□□□ -0.92
NEK9-210ENST00000557026 NPC2P61916 151 aa9.27□□□□□ -0.92
NEK9-210ENST00000557026 BLCAPP62952 87 aa9.27□□□□□ -0.93
NEK9-210ENST00000557026 SEM1Q6ZVN7 128 aa9.27□□□□□ -0.93
NEK9-210ENST00000557026 GPR179Q6PRD1 2367 aa9.27□□□□□ -0.93
NEK9-210ENST00000557026 SUMO4Q6EEV6 95 aa9.27□□□□□ -0.93
NEK9-210ENST00000557026 ORMDL1Q9P0S3 153 aa9.27□□□□□ -0.93
NEK9-210ENST00000557026 ODF3BA8MYP8 253 aa9.27□□□□□ -0.93
NEK9-210ENST00000557026 LMO4P61968 165 aa9.27□□□□□ -0.93
NEK9-210ENST00000557026 LINC00479Q96M42 142 aa9.27□□□□□ -0.93
NEK9-210ENST00000557026 UBE2AP49459 152 aa9.26□□□□□ -0.93
NEK9-210ENST00000557026 FANCMQ8IYD8 2048 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms