RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 OTOGLQ3ZCN5 2332 aa13.43□□□□□ -0.26
PTPN21-208ENST00000556564 IGKV1-17P01599 117 aa13.43□□□□□ -0.26
PTPN21-208ENST00000556564 LURAP1LQ8IV03 231 aa13.43□□□□□ -0.26
PTPN21-208ENST00000556564 PYGO2Q9BRQ0 406 aa13.43□□□□□ -0.26
PTPN21-208ENST00000556564 VWC2LB2RUY7 222 aa13.43□□□□□ -0.26
PTPN21-208ENST00000556564 Q6ZQT7 251 aa13.43□□□□□ -0.26
PTPN21-208ENST00000556564 HIST1H2BLQ99880 126 aa13.43□□□□□ -0.26
PTPN21-208ENST00000556564 LTAP01374 205 aa13.43□□□□□ -0.26
PTPN21-208ENST00000556564 hDV102S1A0JD36 115 aa13.42□□□□□ -0.26
PTPN21-208ENST00000556564 CT83Q5H943 113 aa13.42□□□□□ -0.26
PTPN21-208ENST00000556564 MORN5Q5VZ52 161 aa13.42□□□□□ -0.26
PTPN21-208ENST00000556564 PRIMA1Q86XR5 153 aa13.42□□□□□ -0.26
PTPN21-208ENST00000556564 DOCK11Q5JSL3 2073 aa13.42□□□□□ -0.26
PTPN21-208ENST00000556564 TMEM238C9JI98 176 aa13.42□□□□□ -0.26
PTPN21-208ENST00000556564 CRYGCP07315 174 aa13.42□□□□□ -0.26
PTPN21-208ENST00000556564 DEFB135Q30KP9 77 aa13.42□□□□□ -0.26
PTPN21-208ENST00000556564 LINC01559Q495D7 138 aa13.42□□□□□ -0.26
PTPN21-208ENST00000556564 C16orf74Q96GX8 76 aa13.42□□□□□ -0.26
PTPN21-208ENST00000556564 ZNF625Q96I27 306 aaPredicted RBP13.42□□□□□ -0.26
PTPN21-208ENST00000556564 MED12LQ86YW9 2145 aa13.42□□□□□ -0.26
PTPN21-208ENST00000556564 HLA-DRB4P13762 266 aa13.41□□□□□ -0.26
PTPN21-208ENST00000556564 GATD1Q8NB37 220 aa13.41□□□□□ -0.26
PTPN21-208ENST00000556564 DLX4Q92988 240 aaPredicted RBP13.41□□□□□ -0.26
PTPN21-208ENST00000556564 V9GYV3 84 aa13.41□□□□□ -0.26
PTPN21-208ENST00000556564 HLA-DRB4X5D2U9 266 aa13.41□□□□□ -0.26
PTPN21-208ENST00000556564 RHOHQ15669 191 aa13.41□□□□□ -0.26
PTPN21-208ENST00000556564 CRLF1O75462 422 aa13.41□□□□□ -0.26
PTPN21-208ENST00000556564 A0A1B0GV72 72 aa13.41□□□□□ -0.26
PTPN21-208ENST00000556564 Q9HAA7 133 aa13.41□□□□□ -0.26
PTPN21-208ENST00000556564 SMAD5-AS1Q9Y6J3 95 aa13.41□□□□□ -0.26
PTPN21-208ENST00000556564 RBAKDNA6NC62 111 aa13.41□□□□□ -0.26
PTPN21-208ENST00000556564 LINC00587B1AMM8 73 aa13.41□□□□□ -0.26
PTPN21-208ENST00000556564 BUB3O43684 328 aa13.41□□□□□ -0.26
PTPN21-208ENST00000556564 EGR2P11161 476 aaPredicted RBP13.41□□□□□ -0.26
PTPN21-208ENST00000556564 RNASE13Q5GAN3 156 aaKnown RBP13.41□□□□□ -0.26
PTPN21-208ENST00000556564 NDUFA11Q86Y39 141 aa13.41□□□□□ -0.26
PTPN21-208ENST00000556564 IGKV1OR2-108A0A075B7D4 117 aa13.4□□□□□ -0.26
PTPN21-208ENST00000556564 UNQ9165/PRO28630Q6UXU0 137 aa13.4□□□□□ -0.26
PTPN21-208ENST00000556564 HIST3H2BBQ8N257 126 aa13.4□□□□□ -0.26
PTPN21-208ENST00000556564 Q8N8P6 123 aa13.4□□□□□ -0.26
PTPN21-208ENST00000556564 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.4□□□□□ -0.265e-6■■■■□ 22.8
PTPN21-208ENST00000556564 TMEM89A2RUT3 159 aa13.4□□□□□ -0.26
PTPN21-208ENST00000556564 FAM231BA6NCW3 169 aa13.4□□□□□ -0.26
PTPN21-208ENST00000556564 C2orf66Q6UXQ4 117 aa13.4□□□□□ -0.26
PTPN21-208ENST00000556564 RMI2Q96E14 147 aa13.4□□□□□ -0.26
PTPN21-208ENST00000556564 SPART-AS1P0CW21 52 aa13.4□□□□□ -0.26
PTPN21-208ENST00000556564 MEGF9Q9H1U4 602 aa13.4□□□□□ -0.26
PTPN21-208ENST00000556564 WI2-2373I1.2A0A1W2PRP0 233 aa13.4□□□□□ -0.26
PTPN21-208ENST00000556564 DEFB1P60022 68 aa13.4□□□□□ -0.26
PTPN21-208ENST00000556564 GPHB5Q86YW7 130 aa13.4□□□□□ -0.26
PTPN21-208ENST00000556564 SMIM27A0A1W2PRY6 76 aa13.39□□□□□ -0.27
PTPN21-208ENST00000556564 SLAQ13239 276 aa13.39□□□□□ -0.27
PTPN21-208ENST00000556564 ARFGEF3Q5TH69 2177 aa13.39□□□□□ -0.27
PTPN21-208ENST00000556564 IGKV2D-24A0A075B6R9 120 aa13.39□□□□□ -0.27
PTPN21-208ENST00000556564 CBY1Q9Y3M2 126 aa13.39□□□□□ -0.27
PTPN21-208ENST00000556564 ABCA1O95477 2261 aa13.39□□□□□ -0.27
PTPN21-208ENST00000556564 MYMXA0A1B0GTQ4 84 aa13.39□□□□□ -0.27
PTPN21-208ENST00000556564 PATE2Q6UY27 113 aa13.39□□□□□ -0.27
PTPN21-208ENST00000556564 IGHV1-24A0A0C4DH33 117 aa13.39□□□□□ -0.27
PTPN21-208ENST00000556564 IL15RAQ13261 267 aa13.38□□□□□ -0.27
PTPN21-208ENST00000556564 F8W735 103 aaPredicted RBP13.38□□□□□ -0.27
PTPN21-208ENST00000556564 CGB7P0DN87 165 aa13.38□□□□□ -0.27
PTPN21-208ENST00000556564 ADAMTSL5Q6ZMM2 481 aa13.38□□□□□ -0.27
PTPN21-208ENST00000556564 DEFB125Q8N687 156 aa13.38□□□□□ -0.27
PTPN21-208ENST00000556564 H3BUT2 72 aa13.37□□□□□ -0.27
PTPN21-208ENST00000556564 CHAC1Q9BUX1 264 aa13.37□□□□□ -0.27
PTPN21-208ENST00000556564 SYS1-DBNDD2H3BUS1 97 aa13.37□□□□□ -0.27
PTPN21-208ENST00000556564 MED13LQ71F56 2210 aa13.37□□□□□ -0.27
PTPN21-208ENST00000556564 K7EMT4 169 aa13.37□□□□□ -0.27
PTPN21-208ENST00000556564 K7EN84 100 aa13.37□□□□□ -0.27
PTPN21-208ENST00000556564 TMEM141Q96I45 108 aa13.37□□□□□ -0.27
PTPN21-208ENST00000556564 CUL9Q8IWT3 2517 aa13.37□□□□□ -0.27
PTPN21-208ENST00000556564 FAM231DQ6ZW35 169 aa13.37□□□□□ -0.27
PTPN21-208ENST00000556564 MRPL36Q9P0J6 103 aaKnown RBP13.37□□□□□ -0.27
PTPN21-208ENST00000556564 PFN2P35080 140 aa13.36□□□□□ -0.27
PTPN21-208ENST00000556564 C3orf79P0CE67 100 aa13.36□□□□□ -0.27
PTPN21-208ENST00000556564 GYPEP15421 78 aa13.36□□□□□ -0.27
PTPN21-208ENST00000556564 PRAC2D3DTV9 90 aa13.36□□□□□ -0.27
PTPN21-208ENST00000556564 LEPROTO15243 131 aa13.36□□□□□ -0.27
PTPN21-208ENST00000556564 SPCS1Q9Y6A9 102 aa13.36□□□□□ -0.27
PTPN21-208ENST00000556564 COL5A1P20908 1838 aaPredicted RBP13.35□□□□□ -0.27
PTPN21-208ENST00000556564 INS-IGF2F8WCM5 200 aa13.35□□□□□ -0.27
PTPN21-208ENST00000556564 TRAV25A0A0B4J276 109 aa13.35□□□□□ -0.27
PTPN21-208ENST00000556564 UBE2CO00762 179 aa13.35□□□□□ -0.27
PTPN21-208ENST00000556564 NPYP01303 97 aa13.35□□□□□ -0.27
PTPN21-208ENST00000556564 ZC2HC1BQ5TFG8 222 aa13.35□□□□□ -0.27
PTPN21-208ENST00000556564 ICOSQ9Y6W8 199 aa13.35□□□□□ -0.27
PTPN21-208ENST00000556564 DSCAMO60469 2012 aa13.35□□□□□ -0.27
PTPN21-208ENST00000556564 A0A1B0GWB2 263 aa13.34□□□□□ -0.27
PTPN21-208ENST00000556564 ATP5G1P05496 136 aa13.34□□□□□ -0.27
PTPN21-208ENST00000556564 KRTAP10-9P60411 292 aa13.34□□□□□ -0.27
PTPN21-208ENST00000556564 SMR3AQ99954 134 aa13.34□□□□□ -0.27
PTPN21-208ENST00000556564 FANCD2OSQ96PS1 177 aa13.34□□□□□ -0.27
PTPN21-208ENST00000556564 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.34□□□□□ -0.27
PTPN21-208ENST00000556564 IGKV2-29A2NJV5 120 aaPredicted RBP13.34□□□□□ -0.27
PTPN21-208ENST00000556564 TMEM61Q8N0U2 210 aa13.34□□□□□ -0.27
PTPN21-208ENST00000556564 TEX48A0A1B0GUV7 120 aa13.34□□□□□ -0.27
PTPN21-208ENST00000556564 GHRHP01286 108 aa13.34□□□□□ -0.27
PTPN21-208ENST00000556564 PMVKQ15126 192 aa13.34□□□□□ -0.27
PTPN21-208ENST00000556564 C1orf229Q6ZS94 237 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms