RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 FGF6P10767 208 aa8.42□□□□□ -1.06
ACTN1-216ENST00000556083 MRPL35Q9NZE8 188 aaKnown RBP8.42□□□□□ -1.06
ACTN1-216ENST00000556083 ZNF581Q9P0T4 197 aa8.42□□□□□ -1.06
ACTN1-216ENST00000556083 K7EP34 96 aa8.41□□□□□ -1.06
ACTN1-216ENST00000556083 PDE6GP18545 87 aa8.41□□□□□ -1.06
ACTN1-216ENST00000556083 NPC2P61916 151 aa8.41□□□□□ -1.06
ACTN1-216ENST00000556083 C11orf53Q8IXP5 236 aa8.41□□□□□ -1.06
ACTN1-216ENST00000556083 TCF20Q9UGU0 1960 aaKnown RBP8.41□□□□□ -1.06
ACTN1-216ENST00000556083 PFN2P35080 140 aa8.41□□□□□ -1.06
ACTN1-216ENST00000556083 MRPL36Q9P0J6 103 aaKnown RBP8.41□□□□□ -1.06
ACTN1-216ENST00000556083 NPYP01303 97 aa8.41□□□□□ -1.06
ACTN1-216ENST00000556083 RIPPLY3P57055 190 aa8.41□□□□□ -1.06
ACTN1-216ENST00000556083 LINC00205P59089 165 aa8.41□□□□□ -1.06
ACTN1-216ENST00000556083 ORMDL1Q9P0S3 153 aa8.41□□□□□ -1.06
ACTN1-216ENST00000556083 POLR3KQ9Y2Y1 108 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-216ENST00000556083 TRBV10-1A0A0K0K1A3 114 aa8.41□□□□□ -1.06
ACTN1-216ENST00000556083 CGB3P0DN86 165 aa8.41□□□□□ -1.06
ACTN1-216ENST00000556083 CFHR4Q92496 578 aa8.41□□□□□ -1.06
ACTN1-216ENST00000556083 KLK5Q9Y337 293 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-216ENST00000556083 U3KQE9 123 aa8.41□□□□□ -1.06
ACTN1-216ENST00000556083 MGAMO43451 1857 aa8.4□□□□□ -1.06
ACTN1-216ENST00000556083 TANC1Q9C0D5 1861 aa8.4□□□□□ -1.06
ACTN1-216ENST00000556083 I3L2K1 104 aa8.4□□□□□ -1.06
ACTN1-216ENST00000556083 C14orf177Q52M58 125 aa8.4□□□□□ -1.06
ACTN1-216ENST00000556083 ATP6V0E2Q8NHE4 81 aa8.4□□□□□ -1.06
ACTN1-216ENST00000556083 TRAV12-1A0A0B4J245 112 aa8.4□□□□□ -1.06
ACTN1-216ENST00000556083 IGHV7-81A0A0B4J1V7 117 aa8.4□□□□□ -1.07
ACTN1-216ENST00000556083 GP9P14770 177 aa8.4□□□□□ -1.07
ACTN1-216ENST00000556083 C9orf47Q6ZRZ4 202 aa8.4□□□□□ -1.07
ACTN1-216ENST00000556083 CTSZQ9UBR2 303 aa8.4□□□□□ -1.07
ACTN1-216ENST00000556083 ODF3Q96PU9 254 aa8.39□□□□□ -1.07
ACTN1-216ENST00000556083 ZNF747Q9BV97 191 aa8.39□□□□□ -1.07
ACTN1-216ENST00000556083 K7EQD1 137 aa8.39□□□□□ -1.07
ACTN1-216ENST00000556083 NDUFS7O75251 213 aa8.39□□□□□ -1.07
ACTN1-216ENST00000556083 UBE2BP63146 152 aa8.39□□□□□ -1.07
ACTN1-216ENST00000556083 ZFP2Q6ZN57 461 aa8.39□□□□□ -1.07
ACTN1-216ENST00000556083 PLXNA2O75051 1894 aa8.39□□□□□ -1.07
ACTN1-216ENST00000556083 CFC1BP0CG36 223 aa8.39□□□□□ -1.07
ACTN1-216ENST00000556083 CFC1P0CG37 223 aa8.39□□□□□ -1.07
ACTN1-216ENST00000556083 C9orf153Q5TBE3 101 aa8.39□□□□□ -1.07
ACTN1-216ENST00000556083 TIMM17AQ99595 171 aa8.39□□□□□ -1.07
ACTN1-216ENST00000556083 NDUFB1O75438 58 aa8.39□□□□□ -1.07
ACTN1-216ENST00000556083 IGHG2P01859 326 aa8.39□□□□□ -1.07
ACTN1-216ENST00000556083 SMIM20Q8N5G0 67 aa8.39□□□□□ -1.07
ACTN1-216ENST00000556083 COL6A6A6NMZ7 2263 aa8.39□□□□□ -1.07
ACTN1-216ENST00000556083 ZNF503-AS2A6NEH8 195 aa8.38□□□□□ -1.07
ACTN1-216ENST00000556083 CGB7P0DN87 165 aa8.38□□□□□ -1.07
ACTN1-216ENST00000556083 CYYR1Q96J86 154 aa8.38□□□□□ -1.07
ACTN1-216ENST00000556083 ETDCA0A1B0GVM5 59 aa8.38□□□□□ -1.07
ACTN1-216ENST00000556083 BUB3O43684 328 aa8.38□□□□□ -1.07
ACTN1-216ENST00000556083 LOXL1Q08397 574 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-216ENST00000556083 TCF15Q12870 199 aa8.38□□□□□ -1.07
ACTN1-216ENST00000556083 COX7A2LO14548 114 aa8.38□□□□□ -1.07
ACTN1-216ENST00000556083 IGHV4-59P01825 116 aa8.38□□□□□ -1.07
ACTN1-216ENST00000556083 SUMO4Q6EEV6 95 aa8.38□□□□□ -1.07
ACTN1-216ENST00000556083 ROS1P08922 2347 aa8.38□□□□□ -1.07
ACTN1-216ENST00000556083 A0A1W2PPM0 123 aa8.38□□□□□ -1.07
ACTN1-216ENST00000556083 CLPSL1A2RUU4 121 aa8.38□□□□□ -1.07
ACTN1-216ENST00000556083 K7EIM0 57 aa8.38□□□□□ -1.07
ACTN1-216ENST00000556083 TPSG1Q9NRR2 321 aa8.38□□□□□ -1.07
ACTN1-216ENST00000556083 FANCMQ8IYD8 2048 aa8.37□□□□□ -1.07
ACTN1-216ENST00000556083 IGHV3-16A0A0C4DH30 117 aa8.37□□□□□ -1.07
ACTN1-216ENST00000556083 WI2-2373I1.2A0A1W2PRP0 233 aa8.37□□□□□ -1.07
ACTN1-216ENST00000556083 JMJD7-PLA2G4BH0Y9G9 81 aa8.37□□□□□ -1.07
ACTN1-216ENST00000556083 TMEM258P61165 79 aa8.37□□□□□ -1.07
ACTN1-216ENST00000556083 C4orf3Q8WVX3 66 aa8.37□□□□□ -1.07
ACTN1-216ENST00000556083 HIGD1BQ9P298 99 aa8.37□□□□□ -1.07
ACTN1-216ENST00000556083 DYNAPQ8N1N2 210 aa8.37□□□□□ -1.07
ACTN1-216ENST00000556083 C5orf56Q8N8D9 126 aa8.37□□□□□ -1.07
ACTN1-216ENST00000556083 PIFOQ8TCI5 191 aa8.37□□□□□ -1.07
ACTN1-216ENST00000556083 CARD19Q96LW7 228 aa8.37□□□□□ -1.07
ACTN1-216ENST00000556083 KIAA1671Q9BY89 1806 aa8.37□□□□□ -1.07
ACTN1-216ENST00000556083 NUP210Q8TEM1 1887 aaPredicted RBP8.37□□□□□ -1.07
ACTN1-216ENST00000556083 TICRRQ7Z2Z1 1910 aa8.37□□□□□ -1.07
ACTN1-216ENST00000556083 IGKV2D-24A0A075B6R9 120 aa8.36□□□□□ -1.07
ACTN1-216ENST00000556083 SMIM9A6NGZ8 99 aa8.36□□□□□ -1.07
ACTN1-216ENST00000556083 IGLV1-47P01700 117 aa8.36□□□□□ -1.07
ACTN1-216ENST00000556083 HAMPP81172 84 aa8.36□□□□□ -1.07
ACTN1-216ENST00000556083 SPRY4Q9C004 299 aa8.36□□□□□ -1.07
ACTN1-216ENST00000556083 CUL9Q8IWT3 2517 aa8.36□□□□□ -1.07
ACTN1-216ENST00000556083 TRAV12-2A0A075B6T6 113 aa8.36□□□□□ -1.07
ACTN1-216ENST00000556083 NDUFA1O15239 70 aa8.36□□□□□ -1.07
ACTN1-216ENST00000556083 C5orf24Q7Z6I8 188 aa8.36□□□□□ -1.07
ACTN1-216ENST00000556083 ANKRD29Q8N6D5 301 aa8.36□□□□□ -1.07
ACTN1-216ENST00000556083 ZNF625Q96I27 306 aaPredicted RBP8.36□□□□□ -1.07
ACTN1-216ENST00000556083 NOP10Q9NPE3 64 aaKnown RBP8.36□□□□□ -1.07
ACTN1-216ENST00000556083 IGHV4-61A0A0C4DH41 118 aa8.36□□□□□ -1.07
ACTN1-216ENST00000556083 CTSGP08311 255 aa8.36□□□□□ -1.07
ACTN1-216ENST00000556083 EGR2P11161 476 aaPredicted RBP8.36□□□□□ -1.07
ACTN1-216ENST00000556083 ZNF503Q96F45 646 aa8.36□□□□□ -1.07
ACTN1-216ENST00000556083 OPRPNQ99935 248 aaPredicted RBP8.36□□□□□ -1.07
ACTN1-216ENST00000556083 ZNRD1Q9P1U0 126 aa8.36□□□□□ -1.07
ACTN1-216ENST00000556083 IGKV1-17P01599 117 aa8.36□□□□□ -1.07
ACTN1-216ENST00000556083 IGLL1P15814 213 aa8.36□□□□□ -1.07
ACTN1-216ENST00000556083 Q8N9W7 124 aa8.36□□□□□ -1.07
ACTN1-216ENST00000556083 PKDREJQ9NTG1 2253 aa8.35□□□□□ -1.07
ACTN1-216ENST00000556083 CAMK2N2Q96S95 79 aa8.35□□□□□ -1.07
ACTN1-216ENST00000556083 TSC2P49815 1807 aa8.35□□□□□ -1.07
ACTN1-216ENST00000556083 DOCK8Q8NF50 2099 aa8.35□□□□□ -1.07
ACTN1-216ENST00000556083 USF3Q68DE3 2245 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms